Wall clock time and date at job start Mon Mar 8 2021 03:49:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45200 * 1 3 3 C 1.34233 * 116.99762 * 2 1 4 4 O 1.20819 * 120.00059 * 359.97438 * 3 2 1 5 5 C 1.50704 * 119.99753 * 179.97438 * 3 2 1 6 6 H 1.08993 * 112.85400 * 311.19561 * 5 3 2 7 7 C 1.53778 * 113.68748 * 82.46697 * 5 3 2 8 8 C 1.53782 * 87.08238 * 139.99088 * 7 5 3 9 9 H 1.08995 * 113.69204 * 89.12306 * 8 7 5 10 10 N 1.46903 * 113.61528 * 220.02154 * 8 7 5 11 11 C 1.46903 * 110.99522 * 291.61949 * 10 8 7 12 12 C 1.39143 * 111.00248 * 167.67028 * 10 8 7 13 13 N 1.32339 * 119.71403 * 359.97438 * 12 10 8 14 14 C 1.32014 * 121.64231 * 179.97438 * 13 12 10 15 15 C 1.37979 * 120.90210 * 359.97438 * 14 13 12 16 16 C 1.50703 * 120.32656 * 180.02562 * 15 14 13 17 17 O 1.42907 * 109.46764 * 244.97856 * 16 15 14 18 18 Si 1.86297 * 109.46945 * 4.97780 * 16 15 14 19 19 C 1.38906 * 119.34676 * 0.02562 * 15 14 13 20 20 C 1.38437 * 118.48547 * 0.24970 * 19 15 14 21 21 F 1.35105 * 120.47297 * 179.75087 * 20 19 15 22 22 C 1.53777 * 113.61140 * 179.97438 * 5 3 2 23 23 H 1.08992 * 109.47027 * 300.00213 * 1 2 3 24 24 H 1.08998 * 109.47170 * 60.00303 * 1 2 3 25 25 H 1.09006 * 109.46613 * 180.02562 * 1 2 3 26 26 H 1.09001 * 113.61770 * 25.44111 * 7 5 3 27 27 H 1.09002 * 113.61849 * 254.53657 * 7 5 3 28 28 H 1.08995 * 109.47527 * 289.62307 * 11 10 8 29 29 H 1.08999 * 109.47391 * 49.62750 * 11 10 8 30 30 H 1.09001 * 109.47279 * 169.62525 * 11 10 8 31 31 H 1.08003 * 119.54496 * 179.97438 * 14 13 12 32 32 H 1.08999 * 109.47070 * 124.97896 * 16 15 14 33 33 H 0.96698 * 113.99225 * 179.97438 * 17 16 15 34 34 H 1.48507 * 109.99752 * 178.67947 * 18 16 15 35 35 H 1.48491 * 110.00187 * 299.99914 * 18 16 15 36 36 H 1.08004 * 120.75701 * 179.97438 * 19 15 14 37 37 H 1.09008 * 113.61602 * 105.39017 * 22 5 3 38 38 H 1.08998 * 113.61965 * 334.48683 * 22 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1961 0.0000 4 8 1.4033 2.2093 -0.0005 5 6 3.5663 1.2749 0.0006 6 1 4.0234 0.6366 0.7566 7 6 4.1935 1.1226 -1.3952 8 6 5.1827 2.2262 -0.9849 9 1 6.0822 1.8493 -0.4982 10 7 5.4744 3.1844 -2.0596 11 6 6.2407 2.5474 -3.1390 12 6 6.1426 4.3002 -1.5651 13 7 6.4246 4.3773 -0.2744 14 6 7.0574 5.4178 0.2353 15 6 7.4508 6.4701 -0.5659 16 6 8.1729 7.6512 0.0296 17 8 7.3598 8.8196 -0.0965 18 14 8.5164 7.3251 1.8313 19 6 7.1747 6.4300 -1.9266 20 6 6.5048 5.3290 -2.4322 21 9 6.2113 5.2507 -3.7487 22 6 4.1077 2.7143 -0.0001 23 1 -0.3633 0.5138 0.8899 24 1 -0.3633 0.5138 -0.8900 25 1 -0.3633 -1.0278 0.0005 26 1 3.5272 1.4134 -2.2074 27 1 4.6642 0.1532 -1.5590 28 1 7.2516 2.3357 -2.7909 29 1 5.7541 1.6164 -3.4296 30 1 6.2849 3.2176 -3.9975 31 1 7.2699 5.4457 1.2938 32 1 9.1143 7.8051 -0.4978 33 1 7.7625 9.6201 0.2669 34 1 9.2564 8.4690 2.4224 35 1 7.2408 7.1137 2.5615 36 1 7.4719 7.2413 -2.5746 37 1 4.5091 3.0303 0.9628 38 1 3.4180 3.4400 -0.4310 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_12109656_17656566.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 03:49:49 Heat of formation + Delta-G solvation = -68.359985 kcal Electronic energy + Delta-G solvation = -24351.283566 eV Core-core repulsion = 20498.102365 eV Total energy + Delta-G solvation = -3853.181202 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 297.121 amu Computer time = 0.63 seconds Orbital eigenvalues (eV) -49.93946 -42.07473 -41.38832 -39.85700 -38.11647 -37.34132 -36.37722 -33.54023 -31.84931 -29.44122 -28.23411 -27.25755 -26.45865 -25.29625 -24.81184 -22.87056 -21.76432 -20.45986 -19.14005 -18.81559 -18.62372 -18.16604 -18.00997 -17.49845 -17.22655 -16.93913 -16.52426 -16.16345 -15.83317 -15.74459 -15.25581 -15.06392 -14.44127 -14.32955 -14.30811 -14.13106 -14.03026 -13.83230 -13.50485 -13.22922 -12.97843 -12.73470 -12.63860 -12.33471 -12.16728 -12.01425 -11.69531 -11.44900 -11.27705 -11.10584 -10.79613 -10.61587 -10.55682 -9.16412 -5.09269 -0.23343 -0.00474 1.11712 1.27738 1.47917 1.76796 1.84279 2.24597 2.42197 3.05875 3.10206 3.23241 3.32606 3.42442 3.53834 3.59453 3.76016 3.84770 3.97750 4.08560 4.14968 4.21404 4.23379 4.27150 4.30560 4.45936 4.46474 4.60325 4.64317 4.66849 4.76649 4.79441 4.88344 4.91005 5.07496 5.20136 5.23414 5.48346 5.63941 5.95330 6.30133 6.71380 6.85364 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.359 6.359 3 C 0.471 3.529 4 O -0.502 6.502 5 C -0.111 4.111 6 H 0.129 0.871 7 C -0.112 4.112 8 C 0.069 3.931 9 H 0.094 0.906 10 N -0.465 5.465 11 C 0.015 3.985 12 C 0.296 3.704 13 N -0.483 5.483 14 C 0.125 3.875 15 C -0.127 4.127 16 C -0.069 4.069 17 O -0.535 6.535 18 Si 0.682 3.318 19 C -0.060 4.060 20 C 0.035 3.965 21 F -0.122 7.122 22 C -0.096 4.096 23 H 0.063 0.937 24 H 0.063 0.937 25 H 0.102 0.898 26 H 0.097 0.903 27 H 0.086 0.914 28 H 0.043 0.957 29 H 0.087 0.913 30 H 0.089 0.911 31 H 0.165 0.835 32 H 0.081 0.919 33 H 0.383 0.617 34 H -0.256 1.256 35 H -0.250 1.250 36 H 0.151 0.849 37 H 0.087 0.913 38 H 0.099 0.901 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.326 -2.734 0.724 6.031 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.275 6.275 3 C 0.313 3.687 4 O -0.389 6.389 5 C -0.131 4.131 6 H 0.146 0.854 7 C -0.150 4.150 8 C -0.038 4.038 9 H 0.111 0.889 10 N -0.182 5.182 11 C -0.131 4.131 12 C 0.062 3.938 13 N -0.196 5.196 14 C -0.033 4.033 15 C -0.130 4.130 16 C -0.179 4.179 17 O -0.343 6.343 18 Si 0.582 3.418 19 C -0.086 4.086 20 C 0.011 3.989 21 F -0.101 7.101 22 C -0.133 4.133 23 H 0.082 0.918 24 H 0.082 0.918 25 H 0.121 0.879 26 H 0.115 0.885 27 H 0.105 0.895 28 H 0.062 0.938 29 H 0.106 0.894 30 H 0.108 0.892 31 H 0.182 0.818 32 H 0.099 0.901 33 H 0.231 0.769 34 H -0.181 1.181 35 H -0.174 1.174 36 H 0.169 0.831 37 H 0.105 0.895 38 H 0.118 0.882 Dipole moment (debyes) X Y Z Total from point charges 3.817 -3.215 1.521 5.217 hybrid contribution 0.286 1.785 -0.792 1.973 sum 4.103 -1.431 0.728 4.405 Atomic orbital electron populations 1.23302 0.76129 1.03879 1.02672 1.86517 1.23588 1.33447 1.83951 1.23532 0.91649 0.81350 0.72121 1.90689 1.66940 1.36467 1.44807 1.22396 0.87477 1.01849 1.01377 0.85355 1.23054 0.97654 0.99125 0.95198 1.23041 0.97612 0.91929 0.91228 0.88857 1.59371 1.40700 1.06620 1.11521 1.22670 0.95978 1.00767 0.93689 1.19966 0.91993 0.92919 0.88905 1.67725 1.14191 1.26040 1.11622 1.22445 0.92539 0.88478 0.99804 1.20004 1.02968 0.96718 0.93359 1.24638 0.95311 0.85770 1.12152 1.86600 1.46404 1.18173 1.83098 0.95145 0.83934 0.88768 0.73913 1.21389 0.95187 0.96300 0.95733 1.18069 1.04793 0.96815 0.79208 1.91491 1.91577 1.95981 1.31009 1.22925 0.96205 0.93809 1.00402 0.91814 0.91818 0.87926 0.88481 0.89502 0.93790 0.89412 0.89223 0.81827 0.90097 0.76857 1.18077 1.17402 0.83111 0.89453 0.88223 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.01 10.56 101.05 1.07 1.07 16 2 O -0.36 -0.79 10.57 -39.27 -0.41 -1.20 16 3 C 0.47 1.41 7.49 36.01 0.27 1.68 16 4 O -0.50 -3.13 15.65 -18.74 -0.29 -3.43 16 5 C -0.11 -0.01 4.26 -90.96 -0.39 -0.40 16 6 H 0.13 -0.26 8.14 -51.93 -0.42 -0.69 16 7 C -0.11 0.11 6.48 -25.92 -0.17 -0.06 16 8 C 0.07 0.00 2.49 -66.92 -0.17 -0.17 16 9 H 0.09 -0.07 8.06 -51.93 -0.42 -0.48 16 10 N -0.47 -0.63 4.69 -172.43 -0.81 -1.44 16 11 C 0.01 -0.01 9.11 60.07 0.55 0.54 16 12 C 0.30 0.67 6.18 -154.86 -0.96 -0.28 16 13 N -0.48 -0.88 8.06 -12.36 -0.10 -0.98 16 14 C 0.12 0.06 9.83 -17.57 -0.17 -0.11 16 15 C -0.13 -0.05 5.39 -104.47 -0.56 -0.62 16 16 C -0.07 0.09 2.81 36.01 0.10 0.19 16 17 O -0.54 -0.10 12.82 -35.23 -0.45 -0.55 16 18 Si 0.68 -1.51 29.87 -169.99 -5.08 -6.58 16 19 C -0.06 -0.07 9.82 -39.26 -0.39 -0.45 16 20 C 0.04 0.08 7.01 -39.10 -0.27 -0.19 16 21 F -0.12 -0.35 14.88 2.25 0.03 -0.32 16 22 C -0.10 -0.13 6.04 -25.94 -0.16 -0.29 16 23 H 0.06 0.03 8.13 -51.93 -0.42 -0.40 16 24 H 0.06 0.03 8.13 -51.93 -0.42 -0.39 16 25 H 0.10 -0.23 8.14 -51.93 -0.42 -0.66 16 26 H 0.10 0.02 8.10 -51.93 -0.42 -0.40 16 27 H 0.09 -0.24 8.14 -51.93 -0.42 -0.66 16 28 H 0.04 -0.05 8.10 -51.93 -0.42 -0.47 16 29 H 0.09 -0.18 7.32 -51.93 -0.38 -0.56 16 30 H 0.09 -0.01 5.97 -51.93 -0.31 -0.32 16 31 H 0.17 -0.27 4.87 -52.48 -0.26 -0.53 16 32 H 0.08 -0.27 7.96 -51.93 -0.41 -0.68 16 33 H 0.38 -1.46 8.74 45.56 0.40 -1.06 16 34 H -0.26 0.04 7.11 56.52 0.40 0.44 16 35 H -0.25 -0.23 7.05 56.52 0.40 0.17 16 36 H 0.15 -0.03 8.06 -52.48 -0.42 -0.45 16 37 H 0.09 0.10 8.01 -51.92 -0.42 -0.31 16 38 H 0.10 0.41 7.44 -51.93 -0.39 0.02 16 LS Contribution 321.49 15.07 4.84 4.84 Total: 0.00 -7.89 321.49 -8.27 -16.16 By element: Atomic # 1 Polarization: -2.67 SS G_CDS: -4.76 Total: -7.43 kcal Atomic # 6 Polarization: 2.16 SS G_CDS: -1.25 Total: 0.92 kcal Atomic # 7 Polarization: -1.51 SS G_CDS: -0.91 Total: -2.41 kcal Atomic # 8 Polarization: -4.02 SS G_CDS: -1.16 Total: -5.18 kcal Atomic # 9 Polarization: -0.35 SS G_CDS: 0.03 Total: -0.32 kcal Atomic # 14 Polarization: -1.51 SS G_CDS: -5.08 Total: -6.58 kcal Total LS contribution 4.84 Total: 4.84 kcal Total: -7.89 -8.27 -16.16 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_12109656_17656566.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -52.201 kcal (2) G-P(sol) polarization free energy of solvation -7.886 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -60.087 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.273 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.159 kcal (6) G-S(sol) free energy of system = (1) + (5) -68.360 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.63 seconds