Wall clock time and date at job start Mon Mar 8 2021 05:18:16 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45202 * 1 3 3 C 1.34230 * 116.99836 * 2 1 4 4 O 1.20833 * 119.99930 * 359.97438 * 3 2 1 5 5 C 1.50697 * 120.00262 * 180.27336 * 3 2 1 6 6 H 1.09003 * 112.84637 * 50.05272 * 5 3 2 7 7 C 1.53780 * 113.61928 * 181.25129 * 5 3 2 8 8 C 1.53777 * 87.08398 * 139.97851 * 7 5 3 9 9 H 1.08996 * 113.61657 * 219.93710 * 8 7 5 10 10 N 1.46502 * 113.61486 * 89.11212 * 8 7 5 11 11 C 1.38405 * 119.99836 * 154.99609 * 10 8 7 12 12 N 1.32491 * 119.21677 * 359.73980 * 11 10 8 13 13 C 1.32281 * 120.73581 * 179.71403 * 12 11 10 14 14 C 1.38605 * 119.19872 * 0.54346 * 13 12 11 15 15 C 1.50699 * 120.71831 * 179.74996 * 14 13 12 16 16 O 1.42904 * 109.46911 * 119.97981 * 15 14 13 17 17 Si 1.86301 * 109.47394 * 359.97438 * 15 14 13 18 18 C 1.38600 * 118.55716 * 359.73370 * 14 13 12 19 19 N 1.32273 * 119.19823 * 359.97438 * 18 14 13 20 20 C 1.53779 * 113.61502 * 278.86034 * 5 3 2 21 21 H 1.08998 * 109.47630 * 300.00638 * 1 2 3 22 22 H 1.09004 * 109.46770 * 60.01042 * 1 2 3 23 23 H 1.09001 * 109.46882 * 180.02562 * 1 2 3 24 24 H 1.09002 * 113.61269 * 254.52825 * 7 5 3 25 25 H 1.09004 * 113.61317 * 25.34506 * 7 5 3 26 26 H 0.97004 * 120.00182 * 335.00997 * 10 8 7 27 27 H 1.08004 * 120.39803 * 180.25444 * 13 12 11 28 28 H 1.08996 * 109.47329 * 239.97777 * 15 14 13 29 29 H 0.96697 * 113.99906 * 179.97438 * 16 15 14 30 30 H 1.48495 * 110.00152 * 298.68008 * 17 15 14 31 31 H 1.48501 * 110.00065 * 59.99810 * 17 15 14 32 32 H 1.07998 * 120.39642 * 180.02562 * 18 14 13 33 33 H 1.09009 * 113.61146 * 334.56360 * 20 5 3 34 34 H 1.08998 * 113.61914 * 105.46309 * 20 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4032 2.2094 -0.0005 5 6 3.5663 1.2750 -0.0062 6 1 4.0194 0.6548 -0.7796 7 6 4.1078 2.7139 0.0254 8 6 5.1864 2.2031 0.9952 9 1 5.4068 2.8959 1.8073 10 7 6.3921 1.7099 0.3251 11 6 7.6037 1.7074 0.9941 12 7 7.6563 2.1594 2.2384 13 6 8.7972 2.1655 2.9079 14 6 9.9473 1.7023 2.2882 15 6 11.2664 1.6991 3.0169 16 8 11.7623 0.3614 3.0984 17 14 11.0284 2.3791 4.7350 18 6 9.8576 1.2419 0.9840 19 7 8.6844 1.2576 0.3734 20 6 4.1987 1.0875 1.3829 21 1 -0.3634 0.5139 0.8899 22 1 -0.3633 0.5137 -0.8901 23 1 -0.3633 -1.0277 0.0005 24 1 4.5058 3.0518 -0.9315 25 1 3.4191 3.4299 0.4739 26 1 6.3414 1.3852 -0.5876 27 1 8.8330 2.5314 3.9234 28 1 11.9814 2.3194 2.4766 29 1 12.6107 0.2836 3.5557 30 1 10.5433 3.7807 4.6639 31 1 10.0555 1.5422 5.4822 32 1 10.7350 0.8740 0.4729 33 1 3.5355 1.3578 2.2047 34 1 4.6699 0.1143 1.5205 There are 48 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 48 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_12121850_12175864.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 05:18:16 Heat of formation + Delta-G solvation = -19.561583 kcal Electronic energy + Delta-G solvation = -19598.695755 eV Core-core repulsion = 16307.196294 eV Total energy + Delta-G solvation = -3291.499461 eV No. of doubly occupied orbitals = 48 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 266.110 amu Computer time = 0.41 seconds Orbital eigenvalues (eV) -42.23661 -41.74466 -39.90911 -37.98641 -37.36395 -35.48944 -34.72571 -32.24555 -29.41577 -27.35591 -26.95853 -26.27650 -25.74556 -23.22021 -22.43058 -20.55906 -19.80295 -18.79613 -18.52663 -18.24988 -17.76332 -17.36642 -16.64798 -16.49671 -16.19923 -15.80268 -15.45110 -15.12041 -14.97370 -14.69361 -14.31975 -14.02631 -13.86851 -13.54629 -13.21691 -13.12351 -12.84847 -12.29070 -12.11957 -11.92496 -11.84964 -11.78425 -11.74553 -11.40481 -11.18709 -10.61805 -9.99201 -9.16851 -5.08074 0.01039 0.12762 1.15907 1.19040 1.55620 1.65732 1.73355 1.86813 2.73519 3.02382 3.16579 3.25873 3.31897 3.53037 3.57528 3.63748 3.75730 3.84729 3.97684 4.09396 4.16012 4.23781 4.40362 4.43063 4.53317 4.59116 4.62299 4.64000 4.76892 4.78373 4.93234 5.23471 5.38778 5.72691 5.94335 6.32919 6.55389 6.73341 7.23906 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.358 6.358 3 C 0.470 3.530 4 O -0.504 6.504 5 C -0.113 4.113 6 H 0.125 0.875 7 C -0.125 4.125 8 C 0.138 3.862 9 H 0.118 0.882 10 N -0.679 5.679 11 C 0.569 3.431 12 N -0.559 5.559 13 C 0.194 3.806 14 C -0.246 4.246 15 C -0.051 4.051 16 O -0.548 6.548 17 Si 0.680 3.320 18 C 0.228 3.772 19 N -0.566 5.566 20 C -0.133 4.133 21 H 0.064 0.936 22 H 0.064 0.936 23 H 0.103 0.897 24 H 0.086 0.914 25 H 0.114 0.886 26 H 0.416 0.584 27 H 0.158 0.842 28 H 0.077 0.923 29 H 0.384 0.616 30 H -0.252 1.252 31 H -0.248 1.248 32 H 0.174 0.826 33 H 0.099 0.901 34 H 0.086 0.914 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.171 -0.496 1.651 4.513 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.274 6.274 3 C 0.313 3.687 4 O -0.391 6.391 5 C -0.132 4.132 6 H 0.143 0.857 7 C -0.163 4.163 8 C 0.031 3.969 9 H 0.136 0.864 10 N -0.315 5.315 11 C 0.213 3.787 12 N -0.281 5.281 13 C 0.026 3.974 14 C -0.254 4.254 15 C -0.163 4.163 16 O -0.354 6.354 17 Si 0.581 3.419 18 C 0.059 3.941 19 N -0.287 5.287 20 C -0.172 4.172 21 H 0.083 0.917 22 H 0.083 0.917 23 H 0.121 0.879 24 H 0.105 0.895 25 H 0.132 0.868 26 H 0.254 0.746 27 H 0.175 0.825 28 H 0.095 0.905 29 H 0.232 0.768 30 H -0.177 1.177 31 H -0.173 1.173 32 H 0.191 0.809 33 H 0.118 0.882 34 H 0.105 0.895 Dipole moment (debyes) X Y Z Total from point charges 1.731 0.092 1.496 2.289 hybrid contribution 0.321 -0.254 -0.531 0.671 sum 2.052 -0.162 0.965 2.273 Atomic orbital electron populations 1.23324 0.75962 1.04001 1.02715 1.86525 1.23722 1.33351 1.83785 1.23565 0.91651 0.81421 0.72069 1.90687 1.66971 1.36420 1.45065 1.22660 0.87614 1.01003 1.01917 0.85684 1.23394 0.96859 0.94787 1.01285 1.21820 0.82683 0.96055 0.96300 0.86422 1.43774 1.03094 1.68210 1.16388 1.19295 0.86519 0.87168 0.85716 1.67886 1.28802 1.23106 1.08292 1.22599 0.86596 0.90189 0.97989 1.20753 0.96271 1.10289 0.98085 1.24304 0.93841 0.88798 1.09338 1.86483 1.42175 1.25198 1.81576 0.95039 0.88883 0.79387 0.78567 1.22832 0.94175 0.87025 0.90029 1.67985 0.99043 1.22862 1.38801 1.23476 0.97840 1.01248 0.94685 0.91741 0.91729 0.87866 0.89506 0.86770 0.74555 0.82519 0.90528 0.76778 1.17696 1.17282 0.80936 0.88237 0.89529 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.00 10.56 101.05 1.07 1.06 16 2 O -0.36 -0.69 10.57 -39.26 -0.41 -1.11 16 3 C 0.47 1.03 7.48 36.00 0.27 1.30 16 4 O -0.50 -2.46 15.66 -18.76 -0.29 -2.76 16 5 C -0.11 0.07 4.13 -90.96 -0.38 -0.31 16 6 H 0.13 -0.27 8.14 -51.93 -0.42 -0.69 16 7 C -0.13 0.11 7.14 -25.92 -0.19 -0.07 16 8 C 0.14 -0.04 4.34 -67.03 -0.29 -0.33 16 9 H 0.12 0.07 7.36 -51.93 -0.38 -0.31 16 10 N -0.68 -0.43 5.41 -54.92 -0.30 -0.73 16 11 C 0.57 1.85 8.42 -322.81 -2.72 -0.87 16 12 N -0.56 -2.06 9.13 -13.93 -0.13 -2.18 16 13 C 0.19 0.51 9.92 -17.22 -0.17 0.34 16 14 C -0.25 -0.40 5.43 -104.35 -0.57 -0.96 16 15 C -0.05 0.07 2.84 36.01 0.10 0.17 16 16 O -0.55 0.64 12.76 -35.23 -0.45 0.19 16 17 Si 0.68 -1.50 29.87 -169.99 -5.08 -6.58 16 18 C 0.23 0.45 10.92 -17.23 -0.19 0.26 16 19 N -0.57 -1.93 10.46 -13.93 -0.15 -2.08 16 20 C -0.13 0.08 7.44 -25.83 -0.19 -0.11 16 21 H 0.06 -0.01 8.13 -51.93 -0.42 -0.43 16 22 H 0.06 -0.01 8.13 -51.93 -0.42 -0.43 16 23 H 0.10 -0.25 8.14 -51.93 -0.42 -0.67 16 24 H 0.09 -0.14 8.14 -51.93 -0.42 -0.56 16 25 H 0.11 -0.01 7.45 -51.93 -0.39 -0.39 16 26 H 0.42 -0.34 8.82 -40.82 -0.36 -0.70 16 27 H 0.16 0.20 5.04 -52.48 -0.26 -0.06 16 28 H 0.08 -0.25 7.96 -51.93 -0.41 -0.66 16 29 H 0.38 -2.35 8.74 45.56 0.40 -1.95 16 30 H -0.25 -0.04 7.11 56.52 0.40 0.37 16 31 H -0.25 -0.26 7.11 56.52 0.40 0.14 16 32 H 0.17 -0.07 8.06 -52.49 -0.42 -0.49 16 33 H 0.10 -0.07 8.09 -51.92 -0.42 -0.49 16 34 H 0.09 -0.01 8.14 -51.93 -0.42 -0.44 16 LS Contribution 297.06 15.07 4.48 4.48 Total: 0.00 -8.49 297.06 -9.57 -18.05 By element: Atomic # 1 Polarization: -3.78 SS G_CDS: -3.99 Total: -7.77 kcal Atomic # 6 Polarization: 3.73 SS G_CDS: -3.25 Total: 0.48 kcal Atomic # 7 Polarization: -4.42 SS G_CDS: -0.57 Total: -4.99 kcal Atomic # 8 Polarization: -2.51 SS G_CDS: -1.16 Total: -3.67 kcal Atomic # 14 Polarization: -1.50 SS G_CDS: -5.08 Total: -6.58 kcal Total LS contribution 4.48 Total: 4.48 kcal Total: -8.49 -9.57 -18.05 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_12121850_12175864.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -1.508 kcal (2) G-P(sol) polarization free energy of solvation -8.488 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -9.996 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.566 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.053 kcal (6) G-S(sol) free energy of system = (1) + (5) -19.562 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.41 seconds