Wall clock time and date at job start Mon Mar 8 2021 05:18:21 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45204 * 1 3 3 C 1.34230 * 117.00264 * 2 1 4 4 O 1.20829 * 119.99979 * 359.97438 * 3 2 1 5 5 C 1.50702 * 120.00004 * 179.97438 * 3 2 1 6 6 H 1.08997 * 112.90360 * 311.24854 * 5 3 2 7 7 C 1.53779 * 113.61561 * 82.50200 * 5 3 2 8 8 C 1.53770 * 87.08198 * 139.97917 * 7 5 3 9 9 H 1.09010 * 113.69295 * 220.00454 * 8 7 5 10 10 N 1.46501 * 113.61728 * 89.11693 * 8 7 5 11 11 C 1.38614 * 120.00399 * 107.49814 * 10 8 7 12 12 N 1.29686 * 124.94592 * 0.02562 * 11 10 8 13 13 C 1.32121 * 116.86361 * 179.71488 * 12 11 10 14 14 C 1.33324 * 114.58061 * 0.51825 * 13 12 11 15 15 C 1.50702 * 125.95288 * 179.79304 * 14 13 12 16 16 O 1.42892 * 109.47242 * 64.71145 * 15 14 13 17 17 Si 1.86298 * 109.46915 * 184.71683 * 15 14 13 18 18 S 1.70955 * 124.95121 * 180.02562 * 11 10 8 19 19 C 1.53775 * 87.08418 * 334.56682 * 8 7 5 20 20 H 1.09007 * 109.46948 * 300.00597 * 1 2 3 21 21 H 1.08998 * 109.46745 * 60.00333 * 1 2 3 22 22 H 1.08994 * 109.47163 * 180.02562 * 1 2 3 23 23 H 1.09004 * 113.61348 * 25.42810 * 7 5 3 24 24 H 1.09000 * 113.61349 * 254.53175 * 7 5 3 25 25 H 0.96999 * 119.99952 * 287.50040 * 10 8 7 26 26 H 1.07999 * 122.70869 * 180.34181 * 13 12 11 27 27 H 1.09000 * 109.46724 * 304.71190 * 15 14 13 28 28 H 0.96703 * 114.00176 * 180.02562 * 16 15 14 29 29 H 1.48506 * 109.99834 * 178.68053 * 17 15 14 30 30 H 1.48502 * 110.00011 * 299.99318 * 17 15 14 31 31 H 1.09005 * 113.61731 * 139.97982 * 19 8 7 32 32 H 1.09009 * 113.61729 * 270.80019 * 19 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0615 1.1960 0.0000 4 8 1.4034 2.2094 -0.0005 5 6 3.5664 1.2748 0.0006 6 1 4.0244 0.6360 0.7558 7 6 4.1918 1.1231 -1.3961 8 6 5.1815 2.2264 -0.9866 9 1 5.3981 2.9383 -1.7832 10 7 6.3906 1.7177 -0.3343 11 6 7.6007 1.7310 -1.0102 12 7 7.7721 2.1707 -2.2182 13 6 8.9985 2.1130 -2.7062 14 6 9.9018 1.5912 -1.8759 15 6 11.3676 1.4007 -2.1695 16 8 11.9884 2.6760 -2.3423 17 14 12.1740 0.5046 -0.7491 18 16 9.0847 1.1702 -0.3731 19 6 4.1079 2.7141 0.0004 20 1 -0.3633 0.5140 0.8900 21 1 -0.3633 0.5138 -0.8900 22 1 -0.3633 -1.0276 0.0005 23 1 3.5244 1.4142 -2.2073 24 1 4.6622 0.1537 -1.5609 25 1 6.3444 1.3715 0.5706 26 1 9.2486 2.4580 -3.6986 27 1 11.4823 0.8142 -3.0811 28 1 12.9349 2.6299 -2.5350 29 1 13.6132 0.2824 -1.0403 30 1 12.0246 1.2940 0.4998 31 1 4.5106 3.0292 0.9631 32 1 3.4185 3.4414 -0.4285 There are 46 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 46 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_12121850_15704118.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 05:18:21 Heat of formation + Delta-G solvation = -29.407315 kcal Electronic energy + Delta-G solvation = -18042.924366 eV Core-core repulsion = 14905.576119 eV Total energy + Delta-G solvation = -3137.348246 eV No. of doubly occupied orbitals = 46 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 271.071 amu Computer time = 0.40 seconds Orbital eigenvalues (eV) -41.93220 -40.73905 -39.72075 -37.93079 -37.35940 -35.13993 -31.38491 -29.45086 -27.31162 -26.95295 -26.32158 -24.48040 -22.68470 -21.25540 -20.27055 -19.33860 -18.80315 -18.55318 -17.91189 -17.43352 -17.25159 -16.71618 -16.05884 -15.80196 -15.55799 -15.25163 -14.94266 -14.48783 -14.26081 -13.99731 -13.83742 -13.53807 -13.16038 -12.95079 -12.73724 -12.42144 -12.30762 -12.05593 -11.84571 -11.78271 -11.36025 -11.10156 -10.69057 -10.25230 -10.15368 -8.75380 -5.07313 -0.04524 0.05121 0.70036 1.15699 1.22665 1.52347 1.70467 1.89264 2.03410 2.07040 3.14602 3.23670 3.34165 3.56763 3.59222 3.76420 3.94830 3.98697 4.15830 4.23612 4.38830 4.40380 4.53661 4.59132 4.61053 4.71621 4.78699 4.79287 4.89188 5.20898 5.38667 5.81926 6.01468 6.39858 6.73147 7.01944 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.358 6.358 3 C 0.470 3.530 4 O -0.504 6.504 5 C -0.113 4.113 6 H 0.124 0.876 7 C -0.132 4.132 8 C 0.140 3.860 9 H 0.116 0.884 10 N -0.677 5.677 11 C 0.324 3.676 12 N -0.546 5.546 13 C 0.118 3.882 14 C -0.259 4.259 15 C -0.019 4.019 16 O -0.535 6.535 17 Si 0.650 3.350 18 S 0.101 5.899 19 C -0.126 4.126 20 H 0.064 0.936 21 H 0.064 0.936 22 H 0.103 0.897 23 H 0.099 0.901 24 H 0.088 0.912 25 H 0.415 0.585 26 H 0.176 0.824 27 H 0.085 0.915 28 H 0.381 0.619 29 H -0.241 1.241 30 H -0.238 1.238 31 H 0.086 0.914 32 H 0.114 0.886 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.784 -4.604 0.721 4.726 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.274 6.274 3 C 0.312 3.688 4 O -0.391 6.391 5 C -0.132 4.132 6 H 0.142 0.858 7 C -0.172 4.172 8 C 0.031 3.969 9 H 0.134 0.866 10 N -0.316 5.316 11 C -0.046 4.046 12 N -0.271 5.271 13 C -0.033 4.033 14 C -0.381 4.381 15 C -0.132 4.132 16 O -0.342 6.342 17 Si 0.549 3.451 18 S 0.350 5.650 19 C -0.164 4.164 20 H 0.082 0.918 21 H 0.083 0.917 22 H 0.121 0.879 23 H 0.117 0.883 24 H 0.106 0.894 25 H 0.253 0.747 26 H 0.193 0.807 27 H 0.103 0.897 28 H 0.229 0.771 29 H -0.165 1.165 30 H -0.162 1.162 31 H 0.104 0.896 32 H 0.132 0.868 Dipole moment (debyes) X Y Z Total from point charges 0.289 -4.245 2.041 4.719 hybrid contribution 0.552 0.906 -0.979 1.443 sum 0.840 -3.339 1.062 3.603 Atomic orbital electron populations 1.23323 0.75965 1.03996 1.02717 1.86521 1.23716 1.33362 1.83799 1.23570 0.91674 0.81423 0.72097 1.90690 1.66977 1.36430 1.45023 1.22663 0.87637 1.01004 1.01929 0.85769 1.23445 0.97861 1.01419 0.94456 1.21814 0.82740 0.95997 0.96314 0.86606 1.43657 1.02947 1.68305 1.16727 1.23646 0.91788 0.96828 0.92362 1.66469 1.23648 1.26874 1.10129 1.21306 0.85219 0.96026 1.00722 1.24342 0.99393 1.17713 0.96659 1.23712 0.91006 0.90058 1.08413 1.86621 1.26798 1.27590 1.93209 0.95230 0.83843 0.87570 0.78470 1.83989 1.00327 1.63199 1.17437 1.23408 0.97020 0.94840 1.01175 0.91757 0.91732 0.87864 0.88285 0.89372 0.74722 0.80727 0.89750 0.77089 1.16476 1.16239 0.89585 0.86790 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 10.56 101.05 1.07 1.04 16 2 O -0.36 -0.44 10.57 -39.26 -0.41 -0.85 16 3 C 0.47 0.69 7.48 36.01 0.27 0.96 16 4 O -0.50 -2.21 15.65 -18.75 -0.29 -2.50 16 5 C -0.11 0.18 4.14 -90.96 -0.38 -0.19 16 6 H 0.12 -0.44 8.14 -51.93 -0.42 -0.86 16 7 C -0.13 0.22 7.43 -25.93 -0.19 0.02 16 8 C 0.14 -0.18 4.44 -67.13 -0.30 -0.48 16 9 H 0.12 0.03 7.66 -51.92 -0.40 -0.37 16 10 N -0.68 0.90 5.42 -55.00 -0.30 0.60 16 11 C 0.32 0.38 8.09 -87.68 -0.71 -0.33 16 12 N -0.55 -1.64 9.83 -15.21 -0.15 -1.78 16 13 C 0.12 0.27 11.24 -19.14 -0.22 0.06 16 14 C -0.26 -0.38 5.76 -36.02 -0.21 -0.59 16 15 C -0.02 0.00 2.98 36.01 0.11 0.11 16 16 O -0.53 -0.52 12.86 -35.23 -0.45 -0.97 16 17 Si 0.65 -0.50 31.07 -169.99 -5.28 -5.78 16 18 S 0.10 0.04 20.59 -107.50 -2.21 -2.18 16 19 C -0.13 0.21 7.15 -25.92 -0.19 0.03 16 20 H 0.06 -0.04 8.13 -51.93 -0.42 -0.46 16 21 H 0.06 -0.03 8.13 -51.93 -0.42 -0.46 16 22 H 0.10 -0.31 8.14 -51.93 -0.42 -0.73 16 23 H 0.10 -0.13 8.09 -51.93 -0.42 -0.55 16 24 H 0.09 -0.14 8.14 -51.93 -0.42 -0.56 16 25 H 0.42 -1.51 8.83 -40.82 -0.36 -1.87 16 26 H 0.18 0.16 8.06 -52.49 -0.42 -0.26 16 27 H 0.08 -0.18 7.96 -51.93 -0.41 -0.59 16 28 H 0.38 -1.22 8.74 45.56 0.40 -0.82 16 29 H -0.24 -0.15 7.11 56.52 0.40 0.26 16 30 H -0.24 -0.55 7.11 56.52 0.40 -0.14 16 31 H 0.09 -0.22 8.14 -51.93 -0.42 -0.64 16 32 H 0.11 -0.06 7.44 -51.92 -0.39 -0.44 16 LS Contribution 295.07 15.07 4.45 4.45 Total: 0.00 -7.76 295.07 -9.13 -16.90 By element: Atomic # 1 Polarization: -4.77 SS G_CDS: -3.74 Total: -8.51 kcal Atomic # 6 Polarization: 1.38 SS G_CDS: -0.74 Total: 0.64 kcal Atomic # 7 Polarization: -0.74 SS G_CDS: -0.45 Total: -1.19 kcal Atomic # 8 Polarization: -3.16 SS G_CDS: -1.16 Total: -4.32 kcal Atomic # 14 Polarization: -0.50 SS G_CDS: -5.28 Total: -5.78 kcal Atomic # 16 Polarization: 0.04 SS G_CDS: -2.21 Total: -2.18 kcal Total LS contribution 4.45 Total: 4.45 kcal Total: -7.76 -9.13 -16.90 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_12121850_15704118.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -12.510 kcal (2) G-P(sol) polarization free energy of solvation -7.764 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -20.274 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.133 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.897 kcal (6) G-S(sol) free energy of system = (1) + (5) -29.407 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.40 seconds