Wall clock time and date at job start Mon Mar 8 2021 05:18:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45202 * 1 3 3 C 1.34230 * 116.99836 * 2 1 4 4 O 1.20833 * 119.99930 * 359.97438 * 3 2 1 5 5 C 1.50697 * 120.00262 * 180.27336 * 3 2 1 6 6 H 1.09005 * 112.85050 * 48.51890 * 5 3 2 7 7 C 1.53776 * 113.61980 * 179.72212 * 5 3 2 8 8 C 1.53780 * 87.08410 * 139.97809 * 7 5 3 9 9 H 1.08996 * 113.61102 * 220.01744 * 8 7 5 10 10 N 1.46504 * 113.60999 * 89.19918 * 8 7 5 11 11 C 1.39146 * 119.99411 * 154.99931 * 10 8 7 12 12 N 1.32337 * 119.72140 * 0.02562 * 11 10 8 13 13 C 1.32009 * 121.64647 * 179.97438 * 12 11 10 14 14 C 1.37979 * 120.90196 * 359.97438 * 13 12 11 15 15 C 1.50702 * 120.32581 * 179.97438 * 14 13 12 16 16 O 1.42901 * 109.47016 * 245.00401 * 15 14 13 17 17 Si 1.86298 * 109.47141 * 5.00186 * 15 14 13 18 18 C 1.38900 * 119.34904 * 0.02562 * 14 13 12 19 19 C 1.38449 * 118.48368 * 359.74501 * 18 14 13 20 20 F 1.35102 * 120.47413 * 180.27217 * 19 18 14 21 21 C 1.53780 * 87.07946 * 334.56775 * 8 7 5 22 22 H 1.09004 * 109.46770 * 60.01042 * 1 2 3 23 23 H 1.09001 * 109.46882 * 180.02562 * 1 2 3 24 24 H 1.08998 * 109.47630 * 300.00638 * 1 2 3 25 25 H 1.09000 * 113.61363 * 254.53316 * 7 5 3 26 26 H 1.09002 * 113.61389 * 25.33961 * 7 5 3 27 27 H 0.96998 * 120.00486 * 335.00339 * 10 8 7 28 28 H 1.08004 * 119.54520 * 179.97438 * 13 12 11 29 29 H 1.09000 * 109.47039 * 125.00398 * 15 14 13 30 30 H 0.96702 * 113.99841 * 180.02562 * 16 15 14 31 31 H 1.48502 * 109.99895 * 178.68115 * 17 15 14 32 32 H 1.48505 * 110.00275 * 299.99941 * 17 15 14 33 33 H 1.08000 * 120.76431 * 179.97438 * 18 14 13 34 34 H 1.08996 * 113.61527 * 270.87817 * 21 8 7 35 35 H 1.08999 * 113.61274 * 139.98029 * 21 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4032 2.2094 -0.0005 5 6 3.5663 1.2750 -0.0062 6 1 4.0206 0.6344 -0.7621 7 6 4.1077 2.7143 -0.0122 8 6 5.1849 2.2296 0.9724 9 1 5.4030 2.9433 1.7668 10 7 6.3924 1.7207 0.3173 11 6 7.6092 1.7367 0.9920 12 7 7.6692 2.2124 2.2255 13 6 8.8030 2.2451 2.9008 14 6 9.9752 1.7805 2.3406 15 6 11.2624 1.8246 3.1231 16 8 12.1756 2.7214 2.4876 17 14 10.9160 2.4155 4.8555 18 6 9.9574 1.2727 1.0478 19 6 8.7531 1.2463 0.3653 20 9 8.6886 0.7560 -0.8919 21 6 4.1966 1.1274 1.3887 22 1 -0.3633 0.5137 -0.8901 23 1 -0.3633 -1.0277 0.0005 24 1 -0.3634 0.5139 0.8899 25 1 4.5068 3.0266 -0.9772 26 1 3.4183 3.4419 0.4160 27 1 6.3437 1.3727 -0.5868 28 1 8.8132 2.6410 3.9056 29 1 11.6994 0.8268 3.1601 30 1 13.0278 2.7993 2.9379 31 1 12.1725 2.4332 5.6469 32 1 10.3198 3.7752 4.8188 33 1 10.8616 0.9034 0.5869 34 1 3.5322 1.4209 2.2014 35 1 4.6676 0.1586 1.5547 There are 51 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 51 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_12121850_17656566.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 05:18:25 Heat of formation + Delta-G solvation = -81.618460 kcal Electronic energy + Delta-G solvation = -21778.602665 eV Core-core repulsion = 18080.384152 eV Total energy + Delta-G solvation = -3698.218513 eV No. of doubly occupied orbitals = 51 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 283.105 amu Computer time = 0.51 seconds Orbital eigenvalues (eV) -49.86218 -41.94684 -41.30462 -39.82789 -38.02737 -37.33844 -35.43018 -33.22608 -31.39011 -29.36166 -27.25444 -26.91754 -26.24199 -24.86222 -22.88728 -22.36679 -20.46321 -19.62994 -18.72507 -18.60001 -18.16946 -18.01085 -17.68842 -17.33822 -16.85225 -16.55491 -16.27327 -15.74365 -15.39640 -15.04871 -14.94845 -14.81781 -14.22870 -14.20910 -14.01759 -13.90390 -13.72768 -13.49690 -13.13031 -12.78849 -12.62324 -12.06677 -12.04840 -11.80834 -11.76366 -11.36446 -11.15743 -10.71226 -10.69478 -10.48518 -8.80091 -5.03764 -0.05676 0.12990 1.17869 1.18755 1.52347 1.72378 1.87220 1.88766 2.51176 3.05005 3.14182 3.19826 3.28179 3.36261 3.61507 3.63791 3.73897 3.85865 3.98570 4.05752 4.17186 4.23290 4.24940 4.44796 4.47191 4.56898 4.61244 4.65847 4.69772 4.79671 4.81764 4.98550 5.00409 5.39719 5.41204 5.92489 6.14139 6.36401 6.75317 6.94164 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.358 6.358 3 C 0.470 3.530 4 O -0.504 6.504 5 C -0.114 4.114 6 H 0.124 0.876 7 C -0.128 4.128 8 C 0.136 3.864 9 H 0.118 0.882 10 N -0.701 5.701 11 C 0.392 3.608 12 N -0.509 5.509 13 C 0.150 3.850 14 C -0.160 4.160 15 C -0.064 4.064 16 O -0.537 6.537 17 Si 0.681 3.319 18 C -0.037 4.037 19 C -0.018 4.018 20 F -0.133 7.133 21 C -0.132 4.132 22 H 0.064 0.936 23 H 0.103 0.897 24 H 0.064 0.936 25 H 0.084 0.916 26 H 0.113 0.887 27 H 0.413 0.587 28 H 0.164 0.836 29 H 0.079 0.921 30 H 0.381 0.619 31 H -0.258 1.258 32 H -0.251 1.251 33 H 0.149 0.851 34 H 0.099 0.901 35 H 0.086 0.914 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.945 -3.427 2.463 4.325 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.274 6.274 3 C 0.313 3.687 4 O -0.392 6.392 5 C -0.133 4.133 6 H 0.141 0.859 7 C -0.166 4.166 8 C 0.030 3.970 9 H 0.136 0.864 10 N -0.334 5.334 11 C 0.154 3.846 12 N -0.225 5.225 13 C -0.007 4.007 14 C -0.165 4.165 15 C -0.174 4.174 16 O -0.345 6.345 17 Si 0.581 3.419 18 C -0.063 4.063 19 C -0.044 4.044 20 F -0.112 7.112 21 C -0.171 4.171 22 H 0.082 0.918 23 H 0.121 0.879 24 H 0.083 0.917 25 H 0.103 0.897 26 H 0.131 0.869 27 H 0.251 0.749 28 H 0.181 0.819 29 H 0.096 0.904 30 H 0.230 0.770 31 H -0.183 1.183 32 H -0.175 1.175 33 H 0.166 0.834 34 H 0.117 0.883 35 H 0.105 0.895 Dipole moment (debyes) X Y Z Total from point charges -0.553 -2.094 3.088 3.772 hybrid contribution 1.582 -0.296 -1.587 2.261 sum 1.030 -2.391 1.500 3.004 Atomic orbital electron populations 1.23320 0.76001 1.03978 1.02705 1.86524 1.23692 1.33386 1.83804 1.23588 0.91688 0.81403 0.72055 1.90687 1.66981 1.36431 1.45069 1.22664 0.87548 1.01083 1.01996 0.85852 1.23406 0.97125 0.94786 1.01252 1.21747 0.82988 0.96019 0.96225 0.86404 1.44200 1.03976 1.67825 1.17374 1.18366 0.85402 0.91547 0.89306 1.67309 1.28831 1.20604 1.05752 1.22338 0.86457 0.93127 0.98790 1.19829 0.95193 1.05752 0.95685 1.24572 0.89769 0.96754 1.06283 1.86597 1.28313 1.65957 1.53593 0.95143 0.85720 0.85450 0.75572 1.21269 0.96526 0.95132 0.93402 1.17952 0.94523 1.09039 0.82887 1.91495 1.96887 1.86010 1.36807 1.23436 0.97886 1.01415 0.94405 0.91770 0.87883 0.91735 0.89717 0.86868 0.74930 0.81897 0.90355 0.77045 1.18269 1.17515 0.83370 0.88294 0.89493 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.01 10.56 101.05 1.07 1.05 16 2 O -0.36 -0.56 10.57 -39.26 -0.41 -0.98 16 3 C 0.47 0.87 7.48 36.00 0.27 1.14 16 4 O -0.50 -2.35 15.65 -18.76 -0.29 -2.64 16 5 C -0.11 0.12 4.14 -90.96 -0.38 -0.26 16 6 H 0.12 -0.31 8.14 -51.93 -0.42 -0.73 16 7 C -0.13 0.15 7.15 -25.92 -0.19 -0.03 16 8 C 0.14 -0.15 4.35 -67.12 -0.29 -0.44 16 9 H 0.12 -0.03 7.41 -51.93 -0.38 -0.42 16 10 N -0.70 0.37 5.42 -53.06 -0.29 0.08 16 11 C 0.39 0.52 7.49 -154.85 -1.16 -0.64 16 12 N -0.51 -0.81 9.13 -12.36 -0.11 -0.92 16 13 C 0.15 0.06 9.83 -17.57 -0.17 -0.11 16 14 C -0.16 -0.05 5.39 -104.47 -0.56 -0.62 16 15 C -0.06 0.08 2.81 36.01 0.10 0.18 16 16 O -0.54 -0.07 12.82 -35.23 -0.45 -0.52 16 17 Si 0.68 -1.45 29.88 -169.99 -5.08 -6.53 16 18 C -0.04 -0.03 9.82 -39.26 -0.39 -0.42 16 19 C -0.02 -0.03 7.35 -39.09 -0.29 -0.31 16 20 F -0.13 -0.25 16.65 2.25 0.04 -0.21 16 21 C -0.13 0.19 7.43 -25.92 -0.19 0.00 16 22 H 0.06 -0.02 8.13 -51.93 -0.42 -0.44 16 23 H 0.10 -0.28 8.14 -51.93 -0.42 -0.70 16 24 H 0.06 -0.03 8.13 -51.93 -0.42 -0.45 16 25 H 0.08 -0.14 8.14 -51.93 -0.42 -0.57 16 26 H 0.11 -0.03 7.43 -51.93 -0.39 -0.41 16 27 H 0.41 -0.71 8.18 -40.82 -0.33 -1.04 16 28 H 0.16 -0.27 4.87 -52.48 -0.26 -0.53 16 29 H 0.08 -0.24 7.96 -51.93 -0.41 -0.65 16 30 H 0.38 -1.45 8.74 45.56 0.40 -1.05 16 31 H -0.26 0.00 7.11 56.52 0.40 0.40 16 32 H -0.25 -0.21 7.05 56.52 0.40 0.19 16 33 H 0.15 -0.04 8.06 -52.49 -0.42 -0.47 16 34 H 0.10 -0.14 8.09 -51.93 -0.42 -0.57 16 35 H 0.09 -0.12 8.14 -51.93 -0.42 -0.54 16 LS Contribution 307.64 15.07 4.64 4.64 Total: 0.00 -7.42 307.64 -8.10 -15.52 By element: Atomic # 1 Polarization: -4.02 SS G_CDS: -3.95 Total: -7.98 kcal Atomic # 6 Polarization: 1.72 SS G_CDS: -2.18 Total: -0.45 kcal Atomic # 7 Polarization: -0.44 SS G_CDS: -0.40 Total: -0.84 kcal Atomic # 8 Polarization: -2.98 SS G_CDS: -1.16 Total: -4.14 kcal Atomic # 9 Polarization: -0.25 SS G_CDS: 0.04 Total: -0.21 kcal Atomic # 14 Polarization: -1.45 SS G_CDS: -5.08 Total: -6.53 kcal Total LS contribution 4.64 Total: 4.64 kcal Total: -7.42 -8.10 -15.52 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_12121850_17656566.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -66.102 kcal (2) G-P(sol) polarization free energy of solvation -7.419 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -73.521 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.097 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.516 kcal (6) G-S(sol) free energy of system = (1) + (5) -81.618 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.51 seconds