Wall clock time and date at job start Mon Mar 8 2021 05:22:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86299 * 109.47289 * 2 1 4 4 C 1.50698 * 109.47025 * 120.00420 * 2 1 3 5 5 C 1.38605 * 120.72340 * 64.99850 * 4 2 1 6 6 N 1.32272 * 119.19705 * 180.27714 * 5 4 2 7 7 C 1.32501 * 120.74110 * 359.48581 * 6 5 4 8 8 N 1.38398 * 119.21725 * 180.26714 * 7 6 5 9 9 C 1.46500 * 120.00091 * 0.25057 * 8 7 6 10 10 H 1.08996 * 112.85357 * 23.80369 * 9 8 7 11 11 C 1.53781 * 113.61411 * 155.00349 * 9 8 7 12 12 C 1.53781 * 87.08190 * 139.98197 * 11 9 8 13 13 H 1.09007 * 113.61362 * 219.93091 * 12 11 9 14 14 O 1.42901 * 113.61291 * 89.11629 * 12 11 9 15 15 C 1.53774 * 87.08139 * 334.56459 * 12 11 9 16 16 N 1.32487 * 121.56169 * 0.52397 * 7 6 5 17 17 C 1.32280 * 120.74598 * 359.74603 * 16 7 6 18 18 H 0.96704 * 113.99585 * 59.99757 * 1 2 3 19 19 H 1.09004 * 109.47144 * 240.00147 * 2 1 3 20 20 H 1.48502 * 109.99864 * 60.00124 * 3 2 1 21 21 H 1.48500 * 109.99973 * 181.32166 * 3 2 1 22 22 H 1.08002 * 120.39780 * 359.97438 * 5 4 2 23 23 H 0.97005 * 120.00194 * 180.25775 * 8 7 6 24 24 H 1.09000 * 113.61713 * 254.53032 * 11 9 8 25 25 H 1.08996 * 113.61857 * 25.34571 * 11 9 8 26 26 H 0.96703 * 113.99351 * 179.97438 * 14 12 11 27 27 H 1.09002 * 113.61457 * 270.88925 * 15 12 11 28 28 H 1.08999 * 113.61076 * 139.97934 * 15 12 11 29 29 H 1.08001 * 120.40363 * 179.97438 * 17 16 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7105 1.2304 5 6 1.6925 -2.0634 1.4139 6 7 2.1425 -2.6555 2.5078 7 6 2.8229 -1.9723 3.4166 8 7 3.2838 -2.6247 4.5468 9 6 3.0224 -4.0552 4.7248 10 1 2.8453 -4.5735 3.7825 11 6 4.0440 -4.7598 5.6328 12 6 2.8599 -5.5412 6.2262 13 1 2.9239 -5.6779 7.3057 14 8 2.5681 -6.7544 5.5296 15 6 1.9706 -4.3596 5.8046 16 7 3.0681 -0.6785 3.2715 17 6 2.6417 -0.0250 2.2034 18 1 -0.3933 0.4418 -0.7651 19 1 1.7924 -0.5138 -0.8900 20 1 1.5616 2.4678 1.2085 21 1 3.5346 1.7702 -0.0322 22 1 1.1415 -2.6263 0.6750 23 1 3.7799 -2.1348 5.2213 24 1 4.7521 -5.3859 5.0899 25 1 4.5290 -4.0921 6.3449 26 1 1.8244 -7.2505 5.8984 27 1 1.8877 -3.5827 6.5646 28 1 1.0048 -4.6626 5.4003 29 1 2.8443 1.0298 2.0909 There are 40 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 40 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_12122390_12175864.mol2 29 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 05:22:28 Heat of formation + Delta-G solvation = 15.460873 kcal Electronic energy + Delta-G solvation = -15072.795595 eV Core-core repulsion = 12385.260773 eV Total energy + Delta-G solvation = -2687.534821 eV No. of doubly occupied orbitals = 40 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 224.095 amu Computer time = 0.31 seconds Orbital eigenvalues (eV) -42.07087 -40.50852 -38.00558 -36.72905 -34.72570 -34.65960 -32.03614 -26.98242 -26.82045 -25.96998 -24.70124 -22.90526 -20.99238 -19.26759 -19.07848 -18.43103 -18.01435 -16.68687 -16.55866 -16.33351 -15.81917 -15.69506 -15.23729 -14.70843 -14.59205 -14.06566 -13.82208 -13.50035 -13.29232 -13.03828 -12.45827 -12.21950 -11.81887 -11.76616 -11.62698 -11.13383 -10.85629 -10.56887 -9.93818 -9.06775 -5.05775 0.07282 0.18321 1.21736 1.58398 1.83710 1.89727 2.79567 2.96349 3.15749 3.37885 3.41472 3.54421 3.62951 3.73219 3.78450 3.89712 4.07302 4.14932 4.44222 4.48730 4.55051 4.73383 4.79037 4.91909 4.94881 4.98763 5.33089 5.78819 6.06746 6.40694 6.58750 6.60204 7.31530 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.548 6.548 2 C -0.050 4.050 3 Si 0.681 3.319 4 C -0.249 4.249 5 C 0.226 3.774 6 N -0.563 5.563 7 C 0.567 3.433 8 N -0.686 5.686 9 C 0.145 3.855 10 H 0.125 0.875 11 C -0.142 4.142 12 C 0.083 3.917 13 H 0.076 0.924 14 O -0.550 6.550 15 C -0.186 4.186 16 N -0.566 5.566 17 C 0.195 3.805 18 H 0.383 0.617 19 H 0.076 0.924 20 H -0.249 1.249 21 H -0.253 1.253 22 H 0.172 0.828 23 H 0.414 0.586 24 H 0.086 0.914 25 H 0.099 0.901 26 H 0.385 0.615 27 H 0.091 0.909 28 H 0.079 0.921 29 H 0.158 0.842 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.103 0.739 -1.821 2.254 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.354 6.354 2 C -0.162 4.162 3 Si 0.582 3.418 4 C -0.257 4.257 5 C 0.058 3.942 6 N -0.284 5.284 7 C 0.211 3.789 8 N -0.321 5.321 9 C 0.040 3.960 10 H 0.143 0.857 11 C -0.181 4.181 12 C 0.023 3.977 13 H 0.094 0.906 14 O -0.356 6.356 15 C -0.225 4.225 16 N -0.288 5.288 17 C 0.027 3.973 18 H 0.231 0.769 19 H 0.094 0.906 20 H -0.174 1.174 21 H -0.177 1.177 22 H 0.189 0.811 23 H 0.252 0.748 24 H 0.105 0.895 25 H 0.117 0.883 26 H 0.233 0.767 27 H 0.109 0.891 28 H 0.098 0.902 29 H 0.174 0.826 Dipole moment (debyes) X Y Z Total from point charges 0.297 0.535 -0.324 0.693 hybrid contribution -0.563 0.043 0.061 0.568 sum -0.266 0.578 -0.264 0.689 Atomic orbital electron populations 1.86495 1.17297 1.81819 1.49816 1.24301 0.85594 1.09977 0.96355 0.95095 0.80946 0.78123 0.87672 1.20719 1.07985 0.97092 0.99916 1.22862 0.88863 0.90851 0.91667 1.68014 1.16432 1.39734 1.04261 1.19424 0.87144 0.85110 0.87230 1.44262 1.59048 1.09371 1.19401 1.22570 0.95341 0.78845 0.99242 0.85730 1.23500 0.97039 0.98234 0.99303 1.22450 0.96017 0.84046 0.95218 0.90612 1.86471 1.55563 1.35077 1.58483 1.24217 0.99670 0.99026 0.99600 1.67886 1.27404 1.08492 1.24993 1.22593 0.89091 0.98829 0.86749 0.76869 0.90599 1.17351 1.17736 0.81056 0.74840 0.89549 0.88258 0.76708 0.89078 0.90231 0.82557 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 0.27 12.82 -35.23 -0.45 -0.19 15 2 C -0.05 0.03 2.82 36.00 0.10 0.14 15 3 Si 0.68 -1.10 29.92 -169.99 -5.09 -6.19 15 4 C -0.25 -0.63 5.40 -104.35 -0.56 -1.19 15 5 C 0.23 0.65 10.99 -17.23 -0.19 0.46 15 6 N -0.56 -2.56 9.13 -13.93 -0.13 -2.69 15 7 C 0.57 2.63 8.43 -322.82 -2.72 -0.09 15 8 N -0.69 -1.45 5.50 -55.00 -0.30 -1.75 15 9 C 0.15 0.18 4.18 -67.12 -0.28 -0.10 15 10 H 0.12 0.39 7.37 -51.93 -0.38 0.01 15 11 C -0.14 0.06 7.66 -25.92 -0.20 -0.14 15 12 C 0.08 -0.05 5.28 -25.92 -0.14 -0.19 15 13 H 0.08 -0.16 8.14 -51.92 -0.42 -0.58 15 14 O -0.55 -0.26 13.59 -35.23 -0.48 -0.74 15 15 C -0.19 0.00 7.71 -25.92 -0.20 -0.20 15 16 N -0.57 -2.87 10.46 -13.93 -0.15 -3.02 15 17 C 0.19 0.73 9.92 -17.22 -0.17 0.56 15 18 H 0.38 -2.13 8.74 45.56 0.40 -1.73 15 19 H 0.08 -0.20 7.96 -51.93 -0.41 -0.61 15 20 H -0.25 -0.38 7.06 56.52 0.40 0.02 15 21 H -0.25 -0.23 7.11 56.52 0.40 0.18 15 22 H 0.17 0.05 8.06 -52.49 -0.42 -0.37 15 23 H 0.41 0.23 8.84 -40.82 -0.36 -0.13 15 24 H 0.09 0.04 8.14 -51.93 -0.42 -0.38 15 25 H 0.10 -0.21 8.12 -51.93 -0.42 -0.63 15 26 H 0.38 -1.37 9.12 45.56 0.42 -0.96 15 27 H 0.09 -0.05 8.14 -51.93 -0.42 -0.47 15 28 H 0.08 0.06 8.14 -51.93 -0.42 -0.36 15 29 H 0.16 0.36 5.04 -52.49 -0.26 0.10 15 LS Contribution 253.79 15.07 3.82 3.82 Total: 0.00 -7.96 253.79 -9.47 -17.42 By element: Atomic # 1 Polarization: -3.58 SS G_CDS: -2.34 Total: -5.92 kcal Atomic # 6 Polarization: 3.60 SS G_CDS: -4.36 Total: -0.76 kcal Atomic # 7 Polarization: -6.88 SS G_CDS: -0.58 Total: -7.46 kcal Atomic # 8 Polarization: 0.00 SS G_CDS: -0.93 Total: -0.93 kcal Atomic # 14 Polarization: -1.10 SS G_CDS: -5.09 Total: -6.19 kcal Total LS contribution 3.82 Total: 3.82 kcal Total: -7.96 -9.47 -17.42 kcal The number of atoms in the molecule is 29 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_12122390_12175864.mol2 29 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 32.885 kcal (2) G-P(sol) polarization free energy of solvation -7.957 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 24.928 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.468 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.424 kcal (6) G-S(sol) free energy of system = (1) + (5) 15.461 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.31 seconds