Wall clock time and date at job start Mon Mar 8 2021 05:22:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86301 * 109.47067 * 2 1 4 4 C 1.50697 * 109.47490 * 239.99587 * 2 1 3 5 5 C 1.37982 * 120.32645 * 120.02322 * 4 2 1 6 6 N 1.32007 * 120.90207 * 179.97438 * 5 4 2 7 7 C 1.32341 * 121.64629 * 359.72225 * 6 5 4 8 8 N 1.39140 * 119.71829 * 180.27154 * 7 6 5 9 9 C 1.46495 * 120.00119 * 0.26510 * 8 7 6 10 10 H 1.08994 * 112.85120 * 23.80992 * 9 8 7 11 11 C 1.53785 * 113.61464 * 155.00332 * 9 8 7 12 12 C 1.53781 * 87.08327 * 139.97982 * 11 9 8 13 13 H 1.08998 * 113.61383 * 219.93589 * 12 11 9 14 14 O 1.42899 * 113.61041 * 89.11514 * 12 11 9 15 15 C 1.53777 * 113.61631 * 252.49707 * 9 8 7 16 16 C 1.39348 * 120.55873 * 0.53561 * 7 6 5 17 17 F 1.35104 * 120.46812 * 179.75154 * 16 7 6 18 18 C 1.38439 * 119.05915 * 359.48391 * 16 7 6 19 19 H 0.96701 * 114.00039 * 300.00047 * 1 2 3 20 20 H 1.09003 * 109.46936 * 119.99373 * 2 1 3 21 21 H 1.48504 * 109.99950 * 178.68063 * 3 2 1 22 22 H 1.48502 * 109.99744 * 299.99303 * 3 2 1 23 23 H 1.08007 * 119.55024 * 359.95738 * 5 4 2 24 24 H 0.97006 * 119.99496 * 180.26662 * 8 7 6 25 25 H 1.09000 * 113.61125 * 254.53101 * 11 9 8 26 26 H 1.09003 * 113.61453 * 25.42709 * 11 9 8 27 27 H 0.96702 * 113.99600 * 180.02562 * 14 12 11 28 28 H 1.09007 * 113.61681 * 334.57071 * 15 9 8 29 29 H 1.08997 * 113.61494 * 105.46769 * 15 9 8 30 30 H 1.08001 * 120.75662 * 180.22632 * 18 16 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7105 -1.2304 5 6 2.7255 -0.0466 -2.1428 6 7 3.1723 -0.6580 -3.2241 7 6 2.8843 -1.9252 -3.4742 8 7 3.3813 -2.5317 -4.6236 9 6 4.2243 -1.7694 -5.5479 10 1 4.7242 -0.9277 -5.0687 11 6 5.1659 -2.6471 -6.3894 12 6 4.8468 -1.7181 -7.5726 13 1 4.7235 -2.2436 -8.5195 14 8 5.7249 -0.5950 -7.6714 15 6 3.5192 -1.4015 -6.8641 16 6 2.0830 -2.6558 -2.5989 17 9 1.7860 -3.9479 -2.8586 18 6 1.6002 -2.0403 -1.4567 19 1 -0.3933 0.4417 0.7650 20 1 1.7923 -0.5138 0.8901 21 1 3.5346 1.7703 0.0321 22 1 1.5616 2.4678 -1.2086 23 1 2.9849 0.9876 -1.9701 24 1 3.1695 -3.4592 -4.8129 25 1 6.2066 -2.6035 -6.0682 26 1 4.8064 -3.6671 -6.5257 27 1 5.5289 -0.0067 -8.4134 28 1 2.7094 -2.0809 -7.1303 29 1 3.2304 -0.3523 -6.9262 30 1 0.9799 -2.5817 -0.7578 There are 43 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 43 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_27_12122390_17656566.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 05:22:35 Heat of formation + Delta-G solvation = -48.405733 kcal Electronic energy + Delta-G solvation = -17130.145290 eV Core-core repulsion = 14035.812940 eV Total energy + Delta-G solvation = -3094.332350 eV No. of doubly occupied orbitals = 43 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 241.090 amu Computer time = 0.38 seconds Orbital eigenvalues (eV) -50.08335 -41.63497 -40.45421 -37.94406 -36.72356 -34.77274 -33.37041 -31.35765 -26.94905 -26.79104 -25.80793 -24.14642 -22.85840 -21.04573 -19.39278 -18.96131 -18.43226 -18.10769 -17.95402 -17.05848 -16.81470 -16.48107 -16.09861 -15.52045 -15.15242 -14.96033 -14.63288 -14.46084 -14.16849 -13.99758 -13.76886 -13.45107 -13.17736 -12.60664 -12.44862 -12.12260 -11.67457 -11.23492 -10.93858 -10.86885 -10.80372 -10.26092 -8.89766 -4.94541 -0.28864 -0.03560 1.29917 1.66652 1.86045 1.97787 2.33751 2.86696 3.02316 3.08435 3.30371 3.40103 3.57367 3.63414 3.71064 3.75706 4.02421 4.08233 4.27938 4.34474 4.48648 4.57105 4.59270 4.73522 4.84700 4.91522 4.92520 5.00776 5.30521 5.82400 6.05867 6.79008 6.80348 6.93714 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.565 6.565 2 C -0.063 4.063 3 Si 0.773 3.227 4 C -0.170 4.170 5 C 0.125 3.875 6 N -0.533 5.533 7 C 0.376 3.624 8 N -0.702 5.702 9 C 0.135 3.865 10 H 0.097 0.903 11 C -0.138 4.138 12 C 0.086 3.914 13 H 0.097 0.903 14 O -0.573 6.573 15 C -0.180 4.180 16 C -0.029 4.029 17 F -0.133 7.133 18 C -0.036 4.036 19 H 0.406 0.594 20 H 0.102 0.898 21 H -0.284 1.284 22 H -0.295 1.295 23 H 0.156 0.844 24 H 0.419 0.581 25 H 0.074 0.926 26 H 0.119 0.881 27 H 0.400 0.600 28 H 0.100 0.900 29 H 0.066 0.934 30 H 0.168 0.832 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.453 0.537 2.059 2.576 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.375 6.375 2 C -0.174 4.174 3 Si 0.679 3.321 4 C -0.175 4.175 5 C -0.031 4.031 6 N -0.250 5.250 7 C 0.138 3.862 8 N -0.335 5.335 9 C 0.030 3.970 10 H 0.115 0.885 11 C -0.176 4.176 12 C 0.026 3.974 13 H 0.115 0.885 14 O -0.381 6.381 15 C -0.220 4.220 16 C -0.055 4.055 17 F -0.112 7.112 18 C -0.062 4.062 19 H 0.258 0.742 20 H 0.120 0.880 21 H -0.212 1.212 22 H -0.223 1.223 23 H 0.172 0.828 24 H 0.258 0.742 25 H 0.093 0.907 26 H 0.137 0.863 27 H 0.250 0.750 28 H 0.119 0.881 29 H 0.085 0.915 30 H 0.186 0.814 Dipole moment (debyes) X Y Z Total from point charges 0.002 1.049 0.895 1.379 hybrid contribution -0.790 -1.180 -0.339 1.459 sum -0.787 -0.131 0.557 0.973 Atomic orbital electron populations 1.86435 1.17026 1.82450 1.51585 1.24586 0.86014 1.10678 0.96117 0.94225 0.77520 0.75335 0.85043 1.20279 1.03031 0.94632 0.99572 1.22342 0.93459 0.98981 0.88336 1.67246 1.27402 1.08198 1.22147 1.18640 0.90578 0.88996 0.88012 1.44663 1.53678 1.14721 1.20395 1.22483 0.91508 0.95364 0.87689 0.88525 1.23530 1.00407 0.99200 0.94483 1.22523 0.88828 0.87911 0.98147 0.88510 1.86432 1.56585 1.39047 1.56059 1.24176 0.98626 1.02700 0.96455 1.18094 1.07114 0.80995 0.99295 1.91481 1.92238 1.33461 1.94041 1.21502 0.95665 0.94321 0.94688 0.74244 0.87990 1.21160 1.22321 0.82759 0.74182 0.90689 0.86268 0.74964 0.88117 0.91490 0.81412 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 1.06 12.75 -148.98 -1.90 -0.84 16 2 C -0.06 0.12 2.83 71.24 0.20 0.32 16 3 Si 0.77 -2.35 29.82 68.60 2.05 -0.31 16 4 C -0.17 -0.85 5.43 -19.77 -0.11 -0.96 16 5 C 0.13 1.03 9.84 84.61 0.83 1.86 16 6 N -0.53 -5.79 9.13 -193.03 -1.76 -7.55 16 7 C 0.38 3.25 7.49 133.09 1.00 4.25 16 8 N -0.70 -3.00 5.51 -321.80 -1.77 -4.77 16 9 C 0.13 0.51 4.20 45.52 0.19 0.70 16 10 H 0.10 0.89 7.41 -2.39 -0.02 0.87 16 11 C -0.14 0.04 7.66 31.12 0.24 0.28 16 12 C 0.09 -0.09 5.28 31.12 0.16 0.08 16 13 H 0.10 -0.50 8.14 -2.39 -0.02 -0.52 16 14 O -0.57 -1.09 13.59 -148.98 -2.02 -3.11 16 15 C -0.18 -0.14 7.71 31.12 0.24 0.10 16 16 C -0.03 -0.21 7.35 22.58 0.17 -0.04 16 17 F -0.13 -0.90 16.65 44.97 0.75 -0.15 16 18 C -0.04 -0.18 9.75 22.48 0.22 0.04 16 19 H 0.41 -5.09 8.74 -74.06 -0.65 -5.74 16 20 H 0.10 -0.68 7.96 -2.39 -0.02 -0.70 16 21 H -0.28 -0.67 7.11 99.48 0.71 0.04 16 22 H -0.30 -1.44 7.11 99.48 0.71 -0.73 16 23 H 0.16 0.99 4.88 -2.91 -0.01 0.97 16 24 H 0.42 0.20 8.20 -92.70 -0.76 -0.56 16 25 H 0.07 0.16 8.14 -2.39 -0.02 0.14 16 26 H 0.12 -0.56 8.12 -2.39 -0.02 -0.58 16 27 H 0.40 -2.54 9.12 -74.06 -0.68 -3.21 16 28 H 0.10 -0.13 8.14 -2.38 -0.02 -0.15 16 29 H 0.07 0.21 8.14 -2.39 -0.02 0.19 16 30 H 0.17 0.17 8.06 -2.91 -0.02 0.14 16 Total: 0.00 -17.57 264.25 -2.36 -19.93 By element: Atomic # 1 Polarization: -9.00 SS G_CDS: -0.84 Total: -9.84 kcal Atomic # 6 Polarization: 3.50 SS G_CDS: 3.14 Total: 6.64 kcal Atomic # 7 Polarization: -8.78 SS G_CDS: -3.53 Total: -12.32 kcal Atomic # 8 Polarization: -0.03 SS G_CDS: -3.92 Total: -3.96 kcal Atomic # 9 Polarization: -0.90 SS G_CDS: 0.75 Total: -0.15 kcal Atomic # 14 Polarization: -2.35 SS G_CDS: 2.05 Total: -0.31 kcal Total: -17.57 -2.36 -19.93 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_12122390_17656566.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -28.477 kcal (2) G-P(sol) polarization free energy of solvation -17.566 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -46.043 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.363 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.929 kcal (6) G-S(sol) free energy of system = (1) + (5) -48.406 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.38 seconds