Wall clock time and date at job start Mon Mar 8 2021 05:07:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42897 * 1 3 3 Si 1.86299 * 109.46850 * 2 1 4 4 C 1.50697 * 109.47579 * 120.00262 * 2 1 3 5 5 C 1.37982 * 120.32613 * 244.98123 * 4 2 1 6 6 N 1.32007 * 120.90207 * 180.02562 * 5 4 2 7 7 C 1.32341 * 121.64629 * 359.72225 * 6 5 4 8 8 N 1.39140 * 119.71829 * 180.27154 * 7 6 5 9 9 C 1.46495 * 120.00119 * 0.26510 * 8 7 6 10 10 H 1.08994 * 112.85515 * 336.19785 * 9 8 7 11 11 C 1.53784 * 113.61423 * 107.50518 * 9 8 7 12 12 C 1.53777 * 87.08243 * 139.97934 * 11 9 8 13 13 H 1.09004 * 113.61829 * 89.11642 * 12 11 9 14 14 C 1.53000 * 113.69409 * 220.00930 * 12 11 9 15 15 O 1.42900 * 109.47110 * 272.53778 * 14 12 11 16 16 C 1.53781 * 87.08383 * 334.56704 * 12 11 9 17 17 C 1.39348 * 120.55873 * 0.53561 * 7 6 5 18 18 F 1.35104 * 120.46812 * 179.75154 * 17 7 6 19 19 C 1.38439 * 119.05915 * 359.48391 * 17 7 6 20 20 H 0.96699 * 113.99821 * 299.99090 * 1 2 3 21 21 H 1.09007 * 109.46916 * 240.00431 * 2 1 3 22 22 H 1.48500 * 110.00140 * 300.00158 * 3 2 1 23 23 H 1.48494 * 109.99976 * 61.32281 * 3 2 1 24 24 H 1.08006 * 119.54991 * 0.03970 * 5 4 2 25 25 H 0.97006 * 119.99496 * 180.26662 * 8 7 6 26 26 H 1.08994 * 113.61521 * 254.52884 * 11 9 8 27 27 H 1.09001 * 113.61293 * 25.43199 * 11 9 8 28 28 H 1.09002 * 109.46866 * 32.53163 * 14 12 11 29 29 H 1.08999 * 109.47653 * 152.53824 * 14 12 11 30 30 H 0.96696 * 114.00123 * 180.02562 * 15 14 12 31 31 H 1.09001 * 113.61522 * 270.88209 * 16 12 11 32 32 H 1.08998 * 113.69477 * 139.98716 * 16 12 11 33 33 H 1.08001 * 120.75662 * 180.22632 * 19 17 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9314 -0.7104 1.2304 5 6 2.6386 -0.0203 2.1934 6 7 3.0844 -0.6313 3.2753 7 6 2.8691 -1.9204 3.4832 8 7 3.3525 -2.5227 4.6406 9 6 4.0913 -1.7289 5.6256 10 1 4.5509 -0.8398 5.1940 11 6 3.2977 -1.4511 6.9132 12 6 4.6088 -1.6918 7.6798 13 1 5.2096 -0.7918 7.8109 14 6 4.4258 -2.4784 8.9793 15 8 4.1288 -1.5745 10.0454 16 6 5.0525 -2.5608 6.4911 17 6 2.1670 -2.6809 2.5501 18 9 1.9525 -3.9979 2.7619 19 6 1.6876 -2.0666 1.4059 20 1 -0.3933 0.4416 0.7651 21 1 1.7923 -0.5138 -0.8901 22 1 1.5613 2.4679 -1.2085 23 1 1.5878 2.4585 1.2242 24 1 2.8298 1.0344 2.0604 25 1 3.2003 -3.4682 4.7952 26 1 2.9301 -0.4277 6.9873 27 1 2.5279 -2.1945 7.1206 28 1 3.6045 -3.1857 8.8632 29 1 5.3430 -3.0210 9.2079 30 1 4.0002 -2.0049 10.9017 31 1 4.7625 -3.6075 6.5831 32 1 6.1015 -2.4342 6.2235 33 1 1.1368 -2.6290 0.6665 There are 46 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 46 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_27_12366698_17656566.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 05:07:51 Heat of formation + Delta-G solvation = -55.864975 kcal Electronic energy + Delta-G solvation = -18632.008346 eV Core-core repulsion = 15381.814920 eV Total energy + Delta-G solvation = -3250.193426 eV No. of doubly occupied orbitals = 46 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 255.106 amu Computer time = 0.47 seconds Orbital eigenvalues (eV) -49.97026 -41.51190 -40.35530 -38.13342 -37.33642 -35.44157 -33.24435 -31.42403 -28.73257 -26.76269 -26.41056 -25.20855 -23.22455 -22.49153 -20.79969 -19.28080 -18.61336 -18.37217 -18.20162 -17.62706 -17.03449 -16.64417 -16.34186 -16.11669 -15.88888 -15.52978 -15.47481 -14.76538 -14.50987 -14.35409 -14.06044 -13.50851 -13.46964 -13.43666 -12.76552 -12.61245 -12.18050 -12.04194 -11.91388 -11.45639 -11.14752 -10.81822 -10.75628 -10.66134 -10.54273 -8.77883 -4.89077 -0.09937 0.08971 1.31386 1.62326 1.97844 1.99129 2.51075 3.00707 3.19625 3.30103 3.43095 3.50152 3.59558 3.68501 3.83167 3.85023 3.98099 4.05449 4.40690 4.42627 4.47227 4.52740 4.62991 4.69769 4.72462 4.78335 4.81606 4.97587 5.04003 5.10012 5.26660 5.49089 5.97310 6.18787 6.49530 6.87219 6.94600 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.549 6.549 2 C -0.067 4.067 3 Si 0.765 3.235 4 C -0.203 4.203 5 C 0.146 3.854 6 N -0.528 5.528 7 C 0.381 3.619 8 N -0.703 5.703 9 C 0.136 3.864 10 H 0.113 0.887 11 C -0.146 4.146 12 C -0.108 4.108 13 H 0.094 0.906 14 C 0.084 3.916 15 O -0.598 6.598 16 C -0.127 4.127 17 C -0.038 4.038 18 F -0.140 7.140 19 C -0.039 4.039 20 H 0.386 0.614 21 H 0.130 0.870 22 H -0.300 1.300 23 H -0.277 1.277 24 H 0.181 0.819 25 H 0.416 0.584 26 H 0.059 0.941 27 H 0.082 0.918 28 H 0.054 0.946 29 H 0.059 0.941 30 H 0.396 0.604 31 H 0.099 0.901 32 H 0.087 0.913 33 H 0.156 0.844 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.166 -1.190 1.119 3.562 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.357 6.357 2 C -0.177 4.177 3 Si 0.670 3.330 4 C -0.208 4.208 5 C -0.011 4.011 6 N -0.246 5.246 7 C 0.143 3.857 8 N -0.335 5.335 9 C 0.030 3.970 10 H 0.131 0.869 11 C -0.185 4.185 12 C -0.127 4.127 13 H 0.112 0.888 14 C 0.006 3.994 15 O -0.406 6.406 16 C -0.166 4.166 17 C -0.064 4.064 18 F -0.119 7.119 19 C -0.065 4.065 20 H 0.236 0.764 21 H 0.148 0.852 22 H -0.228 1.228 23 H -0.204 1.204 24 H 0.198 0.802 25 H 0.255 0.745 26 H 0.078 0.922 27 H 0.101 0.899 28 H 0.072 0.928 29 H 0.078 0.922 30 H 0.246 0.754 31 H 0.117 0.883 32 H 0.106 0.894 33 H 0.173 0.827 Dipole moment (debyes) X Y Z Total from point charges 3.667 0.270 0.867 3.778 hybrid contribution -1.905 -1.693 0.482 2.594 sum 1.763 -1.424 1.349 2.637 Atomic orbital electron populations 1.86586 1.18542 1.80368 1.50183 1.25036 0.83307 1.11645 0.97681 0.94118 0.90202 0.71805 0.76888 1.20895 1.05524 0.94178 1.00225 1.22739 0.91029 1.00316 0.87064 1.67343 1.25697 1.07470 1.24055 1.18639 0.90558 0.89169 0.87352 1.44673 1.58733 1.12126 1.17940 1.22498 0.92702 0.95690 0.86063 0.86926 1.23541 0.97184 1.02003 0.95737 1.22301 0.97878 0.99945 0.92619 0.88813 1.22236 0.99699 0.91091 0.86351 1.86446 1.94113 1.38660 1.21415 1.23330 1.00340 0.99567 0.93315 1.18140 1.09755 0.79418 0.99114 1.91466 1.93810 1.31647 1.95021 1.21455 0.95225 0.94914 0.94953 0.76436 0.85235 1.22761 1.20366 0.80216 0.74544 0.92216 0.89939 0.92811 0.92243 0.75446 0.88258 0.89410 0.82653 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -0.51 12.84 -148.98 -1.91 -2.43 16 2 C -0.07 0.17 2.82 71.23 0.20 0.37 16 3 Si 0.77 -3.00 29.91 68.60 2.05 -0.95 16 4 C -0.20 0.13 5.36 -19.77 -0.11 0.02 16 5 C 0.15 0.00 9.83 84.61 0.83 0.84 16 6 N -0.53 -2.07 9.13 -193.03 -1.76 -3.83 16 7 C 0.38 1.50 7.49 133.09 1.00 2.49 16 8 N -0.70 -0.47 5.51 -321.78 -1.77 -2.24 16 9 C 0.14 -0.08 4.27 45.52 0.19 0.11 16 10 H 0.11 0.16 7.40 -2.39 -0.02 0.15 16 11 C -0.15 -0.07 7.43 31.12 0.23 0.16 16 12 C -0.11 0.15 4.01 -10.27 -0.04 0.10 16 13 H 0.09 0.05 8.14 -2.39 -0.02 0.03 16 14 C 0.08 -0.18 6.89 71.98 0.50 0.32 16 15 O -0.60 -0.88 13.66 -148.98 -2.03 -2.92 16 16 C -0.13 0.54 7.39 31.12 0.23 0.77 16 17 C -0.04 -0.15 7.35 22.58 0.17 0.02 16 18 F -0.14 -0.72 16.65 44.97 0.75 0.03 16 19 C -0.04 -0.06 9.82 22.48 0.22 0.16 16 20 H 0.39 -1.69 8.70 -74.06 -0.64 -2.33 16 21 H 0.13 -0.59 7.96 -2.38 -0.02 -0.61 16 22 H -0.30 -1.19 7.11 99.48 0.71 -0.49 16 23 H -0.28 0.12 7.01 99.48 0.70 0.82 16 24 H 0.18 -0.83 4.84 -2.91 -0.01 -0.84 16 25 H 0.42 -0.74 8.20 -92.70 -0.76 -1.50 16 26 H 0.06 0.21 8.14 -2.39 -0.02 0.19 16 27 H 0.08 0.04 7.90 -2.39 -0.02 0.02 16 28 H 0.05 -0.20 7.85 -2.39 -0.02 -0.22 16 29 H 0.06 -0.27 8.14 -2.39 -0.02 -0.29 16 30 H 0.40 -2.75 9.12 -74.06 -0.68 -3.42 16 31 H 0.10 -0.64 8.08 -2.39 -0.02 -0.66 16 32 H 0.09 -0.45 8.14 -2.39 -0.02 -0.47 16 33 H 0.16 -0.06 8.06 -2.91 -0.02 -0.08 16 Total: 0.00 -14.52 285.15 -2.14 -16.67 By element: Atomic # 1 Polarization: -8.83 SS G_CDS: -0.88 Total: -9.71 kcal Atomic # 6 Polarization: 1.96 SS G_CDS: 3.42 Total: 5.38 kcal Atomic # 7 Polarization: -2.54 SS G_CDS: -3.53 Total: -6.07 kcal Atomic # 8 Polarization: -1.40 SS G_CDS: -3.95 Total: -5.34 kcal Atomic # 9 Polarization: -0.72 SS G_CDS: 0.75 Total: 0.03 kcal Atomic # 14 Polarization: -3.00 SS G_CDS: 2.05 Total: -0.95 kcal Total: -14.52 -2.14 -16.67 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_12366698_17656566.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -39.200 kcal (2) G-P(sol) polarization free energy of solvation -14.521 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -53.720 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.145 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.665 kcal (6) G-S(sol) free energy of system = (1) + (5) -55.865 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.47 seconds