Wall clock time and date at job start Mon Mar 8 2021 03:46:29 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42905 * 1 3 3 Si 1.86292 * 109.46905 * 2 1 4 4 C 1.50698 * 109.47320 * 239.99581 * 2 1 3 5 5 C 1.33329 * 125.95316 * 299.98260 * 4 2 1 6 6 N 1.32123 * 114.57848 * 179.75434 * 5 4 2 7 7 C 1.29686 * 116.86438 * 0.46714 * 6 5 4 8 8 N 1.38607 * 124.94891 * 179.81886 * 7 6 5 9 9 C 1.46500 * 120.00141 * 359.69363 * 8 7 6 10 10 H 1.08998 * 109.46845 * 325.00724 * 9 8 7 11 11 C 1.53006 * 109.47249 * 84.99877 * 9 8 7 12 12 C 1.52997 * 109.47164 * 180.02562 * 11 9 8 13 13 C 1.53002 * 109.46978 * 299.99874 * 12 11 9 14 14 H 1.08992 * 109.47056 * 300.00064 * 13 12 11 15 15 O 1.42903 * 109.46797 * 180.02562 * 13 12 11 16 16 C 1.35700 * 117.00052 * 90.00273 * 15 13 12 17 17 N 1.32221 * 119.69175 * 359.72809 * 16 15 13 18 18 C 1.31974 * 121.66413 * 179.70878 * 17 16 15 19 19 C 1.38030 * 120.85411 * 0.56542 * 18 17 16 20 20 C 1.38831 * 119.30465 * 359.72451 * 19 18 17 21 21 C 1.38468 * 118.47237 * 359.97438 * 20 19 18 22 22 Cl 1.73600 * 120.45792 * 180.02562 * 21 20 19 23 23 C 1.52996 * 109.46891 * 60.00410 * 13 12 11 24 24 C 1.52997 * 109.47473 * 205.00175 * 9 8 7 25 25 S 1.70962 * 110.10330 * 359.55024 * 7 6 5 26 26 H 0.96703 * 113.99270 * 60.00450 * 1 2 3 27 27 H 1.09004 * 109.46614 * 119.99954 * 2 1 3 28 28 H 1.48501 * 110.00395 * 59.99677 * 3 2 1 29 29 H 1.48504 * 109.99994 * 181.31754 * 3 2 1 30 30 H 1.07997 * 122.70678 * 359.97438 * 5 4 2 31 31 H 0.97005 * 120.00485 * 179.69328 * 8 7 6 32 32 H 1.09001 * 109.47002 * 60.00085 * 11 9 8 33 33 H 1.09000 * 109.47050 * 300.00351 * 11 9 8 34 34 H 1.09002 * 109.47045 * 180.02562 * 12 11 9 35 35 H 1.09001 * 109.47375 * 59.99966 * 12 11 9 36 36 H 1.07999 * 119.57261 * 180.28530 * 18 17 16 37 37 H 1.08003 * 120.34929 * 179.69957 * 19 18 17 38 38 H 1.08000 * 120.76906 * 180.02562 * 20 19 18 39 39 H 1.09004 * 109.47368 * 179.97438 * 23 13 12 40 40 H 1.09001 * 109.47372 * 59.99964 * 23 13 12 41 41 H 1.09002 * 109.47153 * 59.99757 * 24 9 8 42 42 H 1.09001 * 109.46832 * 299.99948 * 24 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7105 -1.2304 5 6 1.6839 -1.9790 -1.5577 6 7 2.2342 -2.3710 -2.6931 7 6 2.9427 -1.4943 -3.3344 8 7 3.5955 -1.7255 -4.5350 9 6 3.5181 -3.0440 -5.1689 10 1 3.4968 -3.8161 -4.3998 11 6 2.2449 -3.1301 -6.0132 12 6 2.1638 -4.5073 -6.6746 13 6 3.3857 -4.7150 -7.5717 14 1 3.4070 -3.9432 -8.3410 15 8 3.3096 -6.0011 -8.1900 16 6 2.6754 -6.0724 -9.3875 17 7 2.1597 -4.9784 -9.9217 18 6 1.5400 -5.0020 -11.0867 19 6 1.3972 -6.1819 -11.7887 20 6 1.9193 -7.3546 -11.2600 21 6 2.5694 -7.2961 -10.0388 22 17 3.2424 -8.7311 -9.3306 23 6 4.6587 -4.6290 -6.7274 24 6 4.7400 -3.2512 -6.0660 25 16 2.9480 -0.0095 -2.4869 26 1 -0.3932 0.4417 -0.7651 27 1 1.7923 -0.5139 0.8900 28 1 1.5614 2.4679 1.2084 29 1 3.5346 1.7703 -0.0321 30 1 1.0792 -2.6322 -0.9461 31 1 4.1036 -1.0143 -4.9557 32 1 2.2661 -2.3579 -6.7822 33 1 1.3744 -2.9825 -5.3740 34 1 1.2570 -4.5685 -7.2765 35 1 2.1424 -5.2792 -5.9053 36 1 1.1354 -4.0872 -11.4939 37 1 0.8842 -6.1927 -12.7391 38 1 1.8214 -8.2909 -11.7894 39 1 5.5293 -4.7774 -7.3664 40 1 4.6374 -5.4009 -5.9581 41 1 5.6469 -3.1899 -5.4645 42 1 4.7611 -2.4790 -6.8351 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_12496378_15704118.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 03:46:29 Heat of formation + Delta-G solvation = 13.844388 kcal Electronic energy + Delta-G solvation = -27653.678523 eV Core-core repulsion = 23560.371022 eV Total energy + Delta-G solvation = -4093.307501 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 368.075 amu Computer time = 0.75 seconds Orbital eigenvalues (eV) -41.87489 -40.86755 -40.03683 -38.54980 -37.71291 -37.53061 -35.50365 -33.44750 -31.98430 -31.85175 -31.18348 -29.60972 -26.55003 -25.29227 -24.61275 -24.32359 -23.80406 -22.95481 -21.31026 -20.63497 -19.75156 -19.46960 -18.24297 -18.14803 -17.43546 -17.14275 -16.79233 -16.60905 -16.31440 -16.03499 -15.94503 -15.70131 -15.42594 -15.19339 -14.86223 -14.74018 -14.49827 -14.24474 -14.00509 -13.96622 -13.46522 -13.36613 -13.16305 -12.97470 -12.88818 -12.70120 -12.33266 -12.28061 -12.20609 -12.08190 -11.99205 -11.68418 -11.34383 -11.04438 -10.78847 -10.74363 -10.72344 -10.21825 -10.12401 -9.46995 -8.72724 -5.12243 -0.14256 -0.00016 0.05531 0.08138 0.71746 1.09331 1.27807 1.59665 1.79551 1.92047 2.07053 2.14663 2.55122 3.16235 3.45338 3.50122 3.53931 3.62994 3.67928 3.78305 3.89111 3.93359 3.98840 4.04813 4.10078 4.18601 4.27990 4.31286 4.34457 4.50005 4.59789 4.67582 4.68914 4.77134 4.83780 4.89214 4.91601 4.99881 5.07377 5.09905 5.18075 5.22641 5.33686 5.84839 6.06109 6.13800 6.53991 6.63768 7.03957 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.537 6.537 2 C -0.010 4.010 3 Si 0.655 3.345 4 C -0.308 4.308 5 C 0.120 3.880 6 N -0.549 5.549 7 C 0.329 3.671 8 N -0.689 5.689 9 C 0.158 3.842 10 H 0.094 0.906 11 C -0.122 4.122 12 C -0.130 4.130 13 C 0.089 3.911 14 H 0.093 0.907 15 O -0.288 6.288 16 C 0.338 3.662 17 N -0.526 5.526 18 C 0.144 3.856 19 C -0.201 4.201 20 C -0.032 4.032 21 C -0.114 4.114 22 Cl -0.041 7.041 23 C -0.112 4.112 24 C -0.122 4.122 25 S 0.084 5.916 26 H 0.380 0.620 27 H 0.121 0.879 28 H -0.236 1.236 29 H -0.241 1.241 30 H 0.175 0.825 31 H 0.414 0.586 32 H 0.067 0.933 33 H 0.075 0.925 34 H 0.071 0.929 35 H 0.074 0.926 36 H 0.167 0.833 37 H 0.148 0.852 38 H 0.152 0.848 39 H 0.079 0.921 40 H 0.079 0.921 41 H 0.080 0.920 42 H 0.073 0.927 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.028 3.132 -5.295 6.152 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.342 6.342 2 C -0.124 4.124 3 Si 0.555 3.445 4 C -0.431 4.431 5 C -0.031 4.031 6 N -0.274 5.274 7 C -0.042 4.042 8 N -0.328 5.328 9 C 0.051 3.949 10 H 0.112 0.888 11 C -0.162 4.162 12 C -0.168 4.168 13 C 0.033 3.967 14 H 0.111 0.889 15 O -0.194 6.194 16 C 0.158 3.842 17 N -0.250 5.250 18 C -0.011 4.011 19 C -0.221 4.221 20 C -0.058 4.058 21 C -0.144 4.144 22 Cl -0.013 7.013 23 C -0.150 4.150 24 C -0.161 4.161 25 S 0.334 5.666 26 H 0.227 0.773 27 H 0.138 0.862 28 H -0.159 1.159 29 H -0.165 1.165 30 H 0.192 0.808 31 H 0.251 0.749 32 H 0.086 0.914 33 H 0.094 0.906 34 H 0.090 0.910 35 H 0.092 0.908 36 H 0.185 0.815 37 H 0.166 0.834 38 H 0.170 0.830 39 H 0.097 0.903 40 H 0.098 0.902 41 H 0.099 0.901 42 H 0.092 0.908 Dipole moment (debyes) X Y Z Total from point charges 1.220 4.168 -4.059 5.945 hybrid contribution -0.376 -1.652 -0.067 1.696 sum 0.844 2.516 -4.126 4.906 Atomic orbital electron populations 1.86514 1.16928 1.81688 1.49114 1.24106 0.84801 1.08868 0.94657 0.94981 0.81993 0.78127 0.89357 1.25564 1.13395 0.99295 1.04805 1.21328 0.97065 0.93020 0.91693 1.66495 1.16973 1.33574 1.10406 1.23729 0.94902 0.93434 0.92143 1.44136 1.54619 1.14699 1.19343 1.21112 0.94630 0.84206 0.94936 0.88808 1.21860 0.98528 0.96680 0.99082 1.21892 0.97943 0.97778 0.99211 1.22497 0.95816 0.83571 0.94799 0.88948 1.86374 1.70055 1.33999 1.29017 1.19503 0.89974 0.88353 0.86381 1.67465 1.14557 1.28366 1.14637 1.22597 0.91803 0.98538 0.88172 1.22049 1.04419 0.92625 1.03019 1.21474 0.92237 1.00199 0.91874 1.20948 1.07788 0.88082 0.97541 1.98399 1.83782 1.35597 1.83484 1.21539 0.96622 0.97395 0.99482 1.21769 0.98012 0.97304 0.98992 1.83976 1.51747 1.13790 1.17135 0.77284 0.86178 1.15932 1.16532 0.80769 0.74929 0.91440 0.90602 0.90983 0.90779 0.81541 0.83446 0.83049 0.90262 0.90235 0.90114 0.90806 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.20 12.87 -35.23 -0.45 -0.66 16 2 C -0.01 0.00 2.99 36.00 0.11 0.11 16 3 Si 0.66 -0.35 31.05 -169.99 -5.28 -5.63 16 4 C -0.31 -0.26 5.74 -36.02 -0.21 -0.47 16 5 C 0.12 0.24 11.22 -19.14 -0.21 0.03 16 6 N -0.55 -1.57 9.91 -15.21 -0.15 -1.72 16 7 C 0.33 0.36 8.06 -87.68 -0.71 -0.34 16 8 N -0.69 0.74 5.23 -55.78 -0.29 0.45 16 9 C 0.16 -0.15 2.58 -67.93 -0.18 -0.33 16 10 H 0.09 0.09 7.77 -51.93 -0.40 -0.31 16 11 C -0.12 0.05 5.51 -26.73 -0.15 -0.10 16 12 C -0.13 -0.04 5.54 -26.73 -0.15 -0.19 16 13 C 0.09 0.03 2.38 -26.73 -0.06 -0.04 16 14 H 0.09 0.05 6.99 -51.93 -0.36 -0.31 16 15 O -0.29 -0.70 9.24 -18.80 -0.17 -0.87 16 16 C 0.34 0.80 7.45 -17.09 -0.13 0.68 16 17 N -0.53 -0.78 8.65 -13.30 -0.12 -0.90 16 18 C 0.14 -0.12 11.17 -17.57 -0.20 -0.32 16 19 C -0.20 0.34 10.10 -39.44 -0.40 -0.06 16 20 C -0.03 0.02 9.97 -39.28 -0.39 -0.38 16 21 C -0.11 -0.20 6.36 -39.20 -0.25 -0.45 16 22 Cl -0.04 -0.09 28.54 -51.86 -1.48 -1.57 16 23 C -0.11 0.13 5.58 -26.71 -0.15 -0.02 16 24 C -0.12 0.30 5.39 -26.71 -0.14 0.16 16 25 S 0.08 0.00 20.57 -107.50 -2.21 -2.21 16 26 H 0.38 -1.22 8.70 45.56 0.40 -0.82 16 27 H 0.12 0.03 7.96 -51.93 -0.41 -0.39 16 28 H -0.24 -0.49 7.11 56.52 0.40 -0.09 16 29 H -0.24 -0.41 7.11 56.52 0.40 0.00 16 30 H 0.18 0.19 8.06 -52.49 -0.42 -0.24 16 31 H 0.41 -1.34 8.73 -40.82 -0.36 -1.70 16 32 H 0.07 -0.05 8.14 -51.93 -0.42 -0.48 16 33 H 0.08 0.10 8.14 -51.93 -0.42 -0.32 16 34 H 0.07 0.10 8.14 -51.93 -0.42 -0.32 16 35 H 0.07 0.08 8.14 -51.93 -0.42 -0.34 16 36 H 0.17 -0.62 8.06 -52.49 -0.42 -1.04 16 37 H 0.15 -0.64 8.06 -52.48 -0.42 -1.06 16 38 H 0.15 -0.39 8.06 -52.49 -0.42 -0.81 16 39 H 0.08 -0.10 8.14 -51.93 -0.42 -0.52 16 40 H 0.08 -0.05 8.14 -51.93 -0.42 -0.47 16 41 H 0.08 -0.22 8.14 -51.93 -0.42 -0.65 16 42 H 0.07 -0.24 8.14 -51.93 -0.42 -0.66 16 LS Contribution 377.83 15.07 5.69 5.69 Total: 0.00 -6.59 377.83 -13.08 -19.67 By element: Atomic # 1 Polarization: -5.12 SS G_CDS: -5.41 Total: -10.53 kcal Atomic # 6 Polarization: 1.50 SS G_CDS: -3.21 Total: -1.71 kcal Atomic # 7 Polarization: -1.62 SS G_CDS: -0.56 Total: -2.18 kcal Atomic # 8 Polarization: -0.90 SS G_CDS: -0.63 Total: -1.53 kcal Atomic # 14 Polarization: -0.35 SS G_CDS: -5.28 Total: -5.63 kcal Atomic # 16 Polarization: 0.00 SS G_CDS: -2.21 Total: -2.21 kcal Atomic # 17 Polarization: -0.09 SS G_CDS: -1.48 Total: -1.57 kcal Total LS contribution 5.69 Total: 5.69 kcal Total: -6.59 -13.08 -19.67 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_12496378_15704118.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 33.515 kcal (2) G-P(sol) polarization free energy of solvation -6.588 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 26.927 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.083 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.671 kcal (6) G-S(sol) free energy of system = (1) + (5) 13.844 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.75 seconds