Wall clock time and date at job start Mon Mar 8 2021 03:46:31 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50703 * 1 3 3 C 1.33330 * 125.94995 * 2 1 4 4 C 1.50698 * 122.70970 * 359.96842 * 3 2 1 5 5 O 1.42899 * 109.47211 * 329.99295 * 4 3 2 6 6 Si 1.86298 * 109.46823 * 209.99520 * 4 3 2 7 7 N 1.32119 * 114.57801 * 179.78988 * 3 2 1 8 8 C 1.29689 * 116.86437 * 0.51639 * 7 3 2 9 9 N 1.38618 * 124.94915 * 179.71194 * 8 7 3 10 10 C 1.46502 * 119.99978 * 180.02562 * 9 8 7 11 11 H 1.08999 * 109.47082 * 325.00266 * 10 9 8 12 12 C 1.53001 * 109.47005 * 85.00417 * 10 9 8 13 13 C 1.52998 * 109.46882 * 179.97438 * 12 10 9 14 14 C 1.53003 * 109.47254 * 299.99813 * 13 12 10 15 15 H 1.08999 * 109.46882 * 300.00816 * 14 13 12 16 16 O 1.42897 * 109.47076 * 179.97438 * 14 13 12 17 17 C 1.35701 * 116.99322 * 90.00416 * 16 14 13 18 18 N 1.32221 * 119.69608 * 359.72625 * 17 16 14 19 19 C 1.31980 * 121.65922 * 179.70959 * 18 17 16 20 20 C 1.38038 * 120.85853 * 0.56681 * 19 18 17 21 21 C 1.38829 * 119.30130 * 359.72200 * 20 19 18 22 22 C 1.38472 * 118.47244 * 359.97438 * 21 20 19 23 23 Cl 1.73598 * 120.45237 * 179.97438 * 22 21 20 24 24 C 1.53010 * 109.46722 * 59.99964 * 14 13 12 25 25 C 1.52998 * 109.47285 * 300.00016 * 24 14 13 26 26 S 1.70968 * 110.10458 * 359.72434 * 8 7 3 27 27 H 1.09002 * 109.47152 * 179.71292 * 1 2 3 28 28 H 1.09001 * 109.46980 * 59.71392 * 1 2 3 29 29 H 1.09004 * 109.47113 * 299.71373 * 1 2 3 30 30 H 1.09000 * 109.47546 * 89.99738 * 4 3 2 31 31 H 0.96701 * 114.00118 * 300.00202 * 5 4 3 32 32 H 1.48501 * 110.00099 * 58.68030 * 6 4 3 33 33 H 1.48500 * 110.00352 * 179.97438 * 6 4 3 34 34 H 0.96993 * 119.99650 * 0.03733 * 9 8 7 35 35 H 1.09003 * 109.46999 * 300.00171 * 12 10 9 36 36 H 1.09004 * 109.46627 * 60.00093 * 12 10 9 37 37 H 1.08996 * 109.47127 * 179.97438 * 13 12 10 38 38 H 1.08999 * 109.47111 * 59.99906 * 13 12 10 39 39 H 1.07996 * 119.57222 * 180.28758 * 19 18 17 40 40 H 1.07999 * 120.35062 * 179.73933 * 20 19 18 41 41 H 1.08001 * 120.76489 * 180.02562 * 21 20 19 42 42 H 1.09003 * 109.46698 * 179.97438 * 24 14 13 43 43 H 1.08999 * 109.46746 * 60.00769 * 24 14 13 44 44 H 1.08999 * 109.47111 * 300.00216 * 25 24 14 45 45 H 1.08993 * 109.46701 * 179.97438 * 25 24 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2898 1.0793 0.0000 4 6 1.7414 2.4830 -0.0007 5 8 0.4817 2.5019 -0.6750 6 14 2.9327 3.6146 -0.8786 7 7 3.5850 0.8188 0.0044 8 6 3.9315 -0.4309 -0.0023 9 7 5.2385 -0.8926 -0.0049 10 6 5.5066 -2.3328 -0.0132 11 1 4.7455 -2.8475 0.5732 12 6 5.4765 -2.8489 -1.4532 13 6 5.7571 -4.3529 -1.4619 14 6 7.1359 -4.6180 -0.8539 15 1 7.8967 -4.1029 -1.4403 16 8 7.3977 -6.0228 -0.8614 17 6 8.0129 -6.5287 -1.9601 18 7 8.3339 -5.7249 -2.9596 19 6 8.9379 -6.1745 -4.0436 20 6 9.2478 -7.5129 -4.1778 21 6 8.9225 -8.3917 -3.1535 22 6 8.2950 -7.8885 -2.0264 23 17 7.8647 -8.9415 -0.7150 24 6 7.1660 -4.1018 0.5862 25 6 6.8853 -2.5978 0.5949 26 16 2.5413 -1.4261 -0.0078 27 1 -0.3633 -1.0277 -0.0051 28 1 -0.3633 0.5183 -0.8874 29 1 -0.3633 0.5094 0.8926 30 1 1.6086 2.8218 1.0268 31 1 0.5244 2.2118 -1.5965 32 1 3.1469 3.1451 -2.2711 33 1 2.4033 5.0020 -0.8868 34 1 5.9755 -0.2620 -0.0011 35 1 4.4944 -2.6596 -1.8866 36 1 6.2378 -2.3342 -2.0395 37 1 5.7353 -4.7207 -2.4877 38 1 4.9963 -4.8679 -0.8754 39 1 9.1889 -5.4870 -4.8377 40 1 9.7383 -7.8726 -5.0702 41 1 9.1544 -9.4435 -3.2335 42 1 8.1481 -4.2911 1.0196 43 1 6.4052 -4.6169 1.1727 44 1 7.6462 -2.0829 0.0084 45 1 6.9063 -2.2303 1.6208 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_27_12496378_15704122.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 03:46:31 Heat of formation + Delta-G solvation = 15.381597 kcal Electronic energy + Delta-G solvation = -29870.648311 eV Core-core repulsion = 25621.869849 eV Total energy + Delta-G solvation = -4248.778462 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 382.090 amu Computer time = 1.01 seconds Orbital eigenvalues (eV) -41.87343 -41.12107 -40.26206 -38.71763 -37.76225 -37.60384 -35.56963 -33.41507 -32.84580 -31.99414 -31.48296 -30.03607 -28.69841 -25.68757 -25.17259 -24.49028 -24.45480 -23.66281 -22.87617 -21.46960 -20.43791 -19.59778 -19.15210 -18.26150 -18.01775 -17.41911 -17.29050 -16.91612 -16.82327 -16.57479 -15.96052 -15.84745 -15.77547 -15.44120 -15.20173 -14.83541 -14.48675 -14.31352 -14.27081 -14.05225 -13.96780 -13.79006 -13.49221 -13.40435 -13.35744 -13.16323 -13.03510 -12.83627 -12.64609 -12.46560 -12.31158 -12.22565 -12.12959 -11.97348 -11.61152 -11.36075 -10.94204 -10.77275 -10.73193 -10.67065 -10.56003 -10.05456 -9.47671 -8.64352 -4.79248 -0.11373 -0.03820 0.12106 0.14254 0.72396 1.04326 1.28641 1.66453 1.74140 1.82862 1.95381 1.99653 2.58682 3.21440 3.27810 3.44511 3.51140 3.54445 3.68883 3.87036 3.90102 3.96696 4.00534 4.12424 4.13084 4.18427 4.25015 4.31057 4.35816 4.36608 4.53838 4.58360 4.67173 4.77178 4.79041 4.83298 4.87645 4.96167 5.00475 5.01968 5.03427 5.04695 5.15695 5.20351 5.27923 5.38174 5.62569 6.11715 6.30007 6.43151 6.66079 6.90934 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.057 4.057 2 C -0.258 4.258 3 C 0.056 3.944 4 C -0.041 4.041 5 O -0.533 6.533 6 Si 0.784 3.216 7 N -0.556 5.556 8 C 0.315 3.685 9 N -0.680 5.680 10 C 0.152 3.848 11 H 0.083 0.917 12 C -0.123 4.123 13 C -0.123 4.123 14 C 0.089 3.911 15 H 0.089 0.911 16 O -0.303 6.303 17 C 0.318 3.682 18 N -0.541 5.541 19 C 0.136 3.864 20 C -0.191 4.191 21 C -0.035 4.035 22 C -0.133 4.133 23 Cl -0.054 7.054 24 C -0.109 4.109 25 C -0.110 4.110 26 S 0.110 5.890 27 H 0.064 0.936 28 H 0.085 0.915 29 H 0.072 0.928 30 H 0.131 0.869 31 H 0.384 0.616 32 H -0.305 1.305 33 H -0.292 1.292 34 H 0.419 0.581 35 H 0.065 0.935 36 H 0.077 0.923 37 H 0.061 0.939 38 H 0.071 0.929 39 H 0.194 0.806 40 H 0.178 0.822 41 H 0.170 0.830 42 H 0.083 0.917 43 H 0.078 0.922 44 H 0.087 0.913 45 H 0.094 0.906 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.490 -2.964 -2.162 5.798 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.117 4.117 2 C -0.381 4.381 3 C -0.074 4.074 4 C -0.154 4.154 5 O -0.340 6.340 6 Si 0.689 3.311 7 N -0.284 5.284 8 C -0.057 4.057 9 N -0.321 5.321 10 C 0.047 3.953 11 H 0.101 0.899 12 C -0.163 4.163 13 C -0.162 4.162 14 C 0.033 3.967 15 H 0.107 0.893 16 O -0.210 6.210 17 C 0.138 3.862 18 N -0.265 5.265 19 C -0.019 4.019 20 C -0.211 4.211 21 C -0.061 4.061 22 C -0.163 4.163 23 Cl -0.026 7.026 24 C -0.147 4.147 25 C -0.148 4.148 26 S 0.359 5.641 27 H 0.083 0.917 28 H 0.104 0.896 29 H 0.091 0.909 30 H 0.149 0.851 31 H 0.234 0.766 32 H -0.233 1.233 33 H -0.220 1.220 34 H 0.259 0.741 35 H 0.083 0.917 36 H 0.096 0.904 37 H 0.080 0.920 38 H 0.090 0.910 39 H 0.211 0.789 40 H 0.196 0.804 41 H 0.188 0.812 42 H 0.101 0.899 43 H 0.096 0.904 44 H 0.106 0.894 45 H 0.112 0.888 Dipole moment (debyes) X Y Z Total from point charges 4.349 -2.419 -1.781 5.286 hybrid contribution -0.714 -0.426 -0.771 1.134 sum 3.635 -2.846 -2.552 5.275 Atomic orbital electron populations 1.20152 0.85734 1.02072 1.03707 1.25369 1.02054 0.93204 1.17437 1.20220 0.87049 0.97563 1.02565 1.24502 0.91747 0.95021 1.04114 1.86597 1.28649 1.89055 1.29662 0.92871 0.85271 0.73784 0.79149 1.65741 1.17180 1.17054 1.28427 1.23491 0.92705 0.91336 0.98142 1.44084 1.01179 1.07401 1.79412 1.21250 0.99223 0.78294 0.96501 0.89948 1.21903 1.02844 0.94717 0.96808 1.21807 0.96666 0.96295 1.01421 1.22557 0.97711 0.77773 0.98653 0.89286 1.86351 1.72002 1.27534 1.35073 1.19680 0.90857 0.88411 0.87250 1.67493 1.18004 1.38219 1.02812 1.23176 0.89975 0.95463 0.93267 1.22412 1.03743 0.93652 1.01278 1.21815 0.91939 1.02672 0.89672 1.21170 1.10475 0.89595 0.95029 1.98385 1.92049 1.64767 1.47371 1.21538 1.04100 0.95151 0.93945 1.21650 0.94790 0.95238 1.03123 1.83946 0.96173 1.10005 1.73958 0.91739 0.89605 0.90927 0.85100 0.76607 1.23251 1.21964 0.74129 0.91661 0.90404 0.92001 0.91043 0.78943 0.80433 0.81245 0.89852 0.90352 0.89408 0.88773 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.06 -0.07 8.92 71.24 0.64 0.57 16 2 C -0.26 -1.09 6.50 24.58 0.16 -0.93 16 3 C 0.06 0.30 5.91 41.40 0.24 0.54 16 4 C -0.04 -0.13 2.94 71.24 0.21 0.08 16 5 O -0.53 -1.52 10.17 -148.98 -1.51 -3.03 16 6 Si 0.78 2.80 32.09 68.60 2.20 5.00 16 7 N -0.56 -3.13 8.95 -189.85 -1.70 -4.83 16 8 C 0.31 0.94 8.22 179.32 1.47 2.41 16 9 N -0.68 1.53 5.23 -330.39 -1.73 -0.20 16 10 C 0.15 -0.69 2.40 44.99 0.11 -0.58 16 11 H 0.08 -0.29 7.26 -2.39 -0.02 -0.31 16 12 C -0.12 0.38 5.51 30.59 0.17 0.54 16 13 C -0.12 0.14 5.54 30.59 0.17 0.31 16 14 C 0.09 -0.05 2.38 30.60 0.07 0.02 16 15 H 0.09 0.02 6.99 -2.39 -0.02 0.01 16 16 O -0.30 -1.31 9.24 -90.21 -0.83 -2.15 16 17 C 0.32 1.38 7.45 84.82 0.63 2.01 16 18 N -0.54 -1.18 8.65 -308.86 -2.67 -3.85 16 19 C 0.14 -0.45 11.17 84.62 0.95 0.49 16 20 C -0.19 1.06 10.10 22.36 0.23 1.28 16 21 C -0.04 0.08 9.97 22.47 0.22 0.31 16 22 C -0.13 -0.40 6.36 22.52 0.14 -0.26 16 23 Cl -0.05 -0.23 28.54 -2.72 -0.08 -0.31 16 24 C -0.11 0.46 5.57 30.60 0.17 0.63 16 25 C -0.11 0.78 5.39 30.59 0.16 0.95 16 26 S 0.11 0.25 21.69 -56.49 -1.23 -0.97 16 27 H 0.06 -0.02 8.14 -2.39 -0.02 -0.04 16 28 H 0.09 -0.04 6.37 -2.39 -0.02 -0.05 16 29 H 0.07 0.14 8.14 -2.38 -0.02 0.12 16 30 H 0.13 0.18 7.96 -2.39 -0.02 0.16 16 31 H 0.38 -0.68 8.13 -74.06 -0.60 -1.28 16 32 H -0.31 -2.98 7.11 99.48 0.71 -2.27 16 33 H -0.29 -2.48 7.11 99.48 0.71 -1.78 16 34 H 0.42 -1.89 8.73 -92.71 -0.81 -2.70 16 35 H 0.06 -0.06 8.04 -2.39 -0.02 -0.08 16 36 H 0.08 -0.24 8.14 -2.39 -0.02 -0.26 16 37 H 0.06 0.11 8.14 -2.39 -0.02 0.09 16 38 H 0.07 -0.04 8.14 -2.39 -0.02 -0.06 16 39 H 0.19 -1.85 8.06 -2.91 -0.02 -1.87 16 40 H 0.18 -2.12 8.06 -2.91 -0.02 -2.14 16 41 H 0.17 -1.15 8.06 -2.91 -0.02 -1.17 16 42 H 0.08 -0.34 8.14 -2.39 -0.02 -0.36 16 43 H 0.08 -0.29 8.14 -2.39 -0.02 -0.31 16 44 H 0.09 -0.75 8.14 -2.39 -0.02 -0.77 16 45 H 0.09 -0.78 8.14 -2.39 -0.02 -0.80 16 Total: 0.00 -15.72 394.04 -2.13 -17.85 By element: Atomic # 1 Polarization: -15.56 SS G_CDS: -0.33 Total: -15.89 kcal Atomic # 6 Polarization: 2.63 SS G_CDS: 5.75 Total: 8.38 kcal Atomic # 7 Polarization: -2.78 SS G_CDS: -6.10 Total: -8.88 kcal Atomic # 8 Polarization: -2.83 SS G_CDS: -2.35 Total: -5.18 kcal Atomic # 14 Polarization: 2.80 SS G_CDS: 2.20 Total: 5.00 kcal Atomic # 16 Polarization: 0.25 SS G_CDS: -1.23 Total: -0.97 kcal Atomic # 17 Polarization: -0.23 SS G_CDS: -0.08 Total: -0.31 kcal Total: -15.72 -2.13 -17.85 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_12496378_15704122.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 33.231 kcal (2) G-P(sol) polarization free energy of solvation -15.719 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 17.511 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.130 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.849 kcal (6) G-S(sol) free energy of system = (1) + (5) 15.382 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.01 seconds