Wall clock time and date at job start Mon Mar 8 2021 05:43:14 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52999 * 1 3 3 C 1.53003 * 109.47155 * 2 1 4 4 C 1.52996 * 109.47467 * 240.00276 * 2 1 3 5 5 O 1.45201 * 109.47449 * 119.99766 * 2 1 3 6 6 C 1.34230 * 116.99712 * 60.00307 * 5 2 1 7 7 O 1.20827 * 119.99809 * 359.97438 * 6 5 2 8 8 C 1.50700 * 120.00046 * 180.02562 * 6 5 2 9 9 H 1.08996 * 112.84607 * 311.19649 * 8 6 5 10 10 C 1.53781 * 113.69071 * 82.46184 * 8 6 5 11 11 C 1.53783 * 87.07900 * 139.99441 * 10 8 6 12 12 H 1.09003 * 113.69102 * 89.13058 * 11 10 8 13 13 N 1.46505 * 113.61182 * 220.01549 * 11 10 8 14 14 C 1.38993 * 120.00282 * 252.49809 * 13 11 10 15 15 N 1.32397 * 119.70858 * 179.97438 * 14 13 11 16 16 C 1.31977 * 121.62351 * 179.97438 * 15 14 13 17 17 C 1.38018 * 120.85481 * 359.97438 * 16 15 14 18 18 C 1.50707 * 120.33108 * 180.02562 * 17 16 15 19 19 O 1.42902 * 109.46836 * 245.00145 * 18 17 16 20 20 Si 1.86293 * 109.47268 * 5.00174 * 18 17 16 21 21 C 1.38880 * 119.33470 * 0.02562 * 17 16 15 22 22 C 1.38305 * 118.50194 * 359.97438 * 21 17 16 23 23 C 1.53773 * 87.08074 * 334.56654 * 11 10 8 24 24 H 1.08998 * 109.47145 * 299.99567 * 1 2 3 25 25 H 1.08996 * 109.47013 * 60.00300 * 1 2 3 26 26 H 1.09002 * 109.46950 * 180.02562 * 1 2 3 27 27 H 1.08997 * 109.47409 * 180.02562 * 3 2 1 28 28 H 1.09002 * 109.46861 * 300.00455 * 3 2 1 29 29 H 1.09005 * 109.47012 * 59.99944 * 3 2 1 30 30 H 1.09002 * 109.46595 * 299.99678 * 4 2 1 31 31 H 1.08999 * 109.47410 * 59.99180 * 4 2 1 32 32 H 1.09000 * 109.47693 * 180.02562 * 4 2 1 33 33 H 1.08997 * 113.61642 * 25.44473 * 10 8 6 34 34 H 1.09003 * 113.61170 * 254.54174 * 10 8 6 35 35 H 0.97001 * 119.99758 * 72.49752 * 13 11 10 36 36 H 1.08002 * 119.56975 * 179.97438 * 16 15 14 37 37 H 1.08997 * 109.47204 * 125.00189 * 18 17 16 38 38 H 0.96699 * 113.99917 * 59.99892 * 19 18 17 39 39 H 1.48497 * 110.00015 * 180.02562 * 20 18 17 40 40 H 1.48505 * 109.99843 * 301.31862 * 20 18 17 41 41 H 1.07998 * 120.75276 * 180.24919 * 21 17 16 42 42 H 1.07999 * 120.44559 * 179.97438 * 22 21 17 43 43 H 1.08998 * 113.61521 * 139.98645 * 23 11 10 44 44 H 1.09005 * 113.61445 * 270.88279 * 23 11 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0401 -0.7212 -1.2492 5 8 2.0141 -0.6844 1.1856 6 6 1.6535 -1.9684 1.3379 7 8 0.9561 -2.5025 0.5082 8 6 2.1175 -2.7434 2.5441 9 1 3.1879 -2.6449 2.7243 10 6 1.2577 -2.5090 3.7974 11 6 1.4023 -4.0134 4.0818 12 1 2.2767 -4.2635 4.6825 13 7 0.1734 -4.6374 4.5786 14 6 0.0773 -5.0182 5.9119 15 7 -1.0362 -5.5812 6.3548 16 6 -1.1682 -5.9578 7.6128 17 6 -0.1416 -5.7767 8.5174 18 6 -0.3049 -6.2117 9.9510 19 8 -0.2739 -5.0649 10.8031 20 14 -1.9353 -7.0904 10.1515 21 6 1.0434 -5.1897 8.0931 22 6 1.1524 -4.8054 6.7690 23 6 1.6196 -4.1981 2.5707 24 1 -0.3633 0.5138 0.8900 25 1 -0.3633 0.5138 -0.8900 26 1 -0.3633 -1.0277 0.0005 27 1 3.1300 1.4426 -0.0005 28 1 1.6766 1.9564 -0.8900 29 1 1.6766 1.9564 0.8900 30 1 1.6768 -1.7488 -1.2492 31 1 1.6767 -0.2074 -2.1392 32 1 3.1301 -0.7216 -1.2490 33 1 0.2356 -2.2029 3.5747 34 1 1.7373 -1.8755 4.5436 35 1 -0.5732 -4.7847 3.9771 36 1 -2.0916 -6.4135 7.9387 37 1 0.5073 -6.8867 10.2207 38 1 -0.9703 -4.4196 10.6196 39 1 -2.1086 -7.5239 11.5612 40 1 -3.0490 -6.1910 9.7567 41 1 1.8629 -5.0407 8.7805 42 1 2.0596 -4.3456 6.4056 43 1 2.3911 -4.9282 2.3266 44 1 0.6963 -4.3538 2.0126 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_12626396_13915762.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 05:43:14 Heat of formation + Delta-G solvation = -46.586809 kcal Electronic energy + Delta-G solvation = -25052.284185 eV Core-core repulsion = 21358.425877 eV Total energy + Delta-G solvation = -3693.858308 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 307.162 amu Computer time = 0.68 seconds Orbital eigenvalues (eV) -42.17784 -41.40536 -40.09264 -38.08814 -37.66698 -35.45776 -34.96754 -33.38272 -31.33591 -28.40408 -28.39229 -27.95048 -27.00094 -26.09095 -24.86911 -23.46559 -22.33935 -21.06595 -20.47937 -18.98572 -18.54889 -18.38394 -17.63587 -17.24327 -17.08863 -16.57077 -16.39106 -16.22220 -15.92626 -15.45082 -15.37268 -15.05849 -14.71874 -14.63482 -14.27198 -14.03361 -13.83978 -13.72986 -13.48907 -13.32132 -13.17500 -12.97200 -12.91026 -12.62014 -12.58987 -12.44221 -12.31590 -12.13511 -11.96076 -11.85011 -11.38690 -11.16994 -10.90288 -10.75534 -10.52775 -10.35678 -8.74440 -4.94479 0.23556 0.42151 1.17209 1.31049 1.57102 1.60337 1.98077 2.10260 2.81243 3.11688 3.19185 3.40503 3.46194 3.53273 3.59216 3.68697 3.75099 3.77332 3.81602 3.90560 3.97512 4.05450 4.22397 4.31479 4.42735 4.49560 4.50204 4.55132 4.56315 4.62392 4.70932 4.72701 4.73572 4.74342 4.82791 4.86642 4.95539 5.01888 5.03904 5.24320 5.26252 5.30886 5.50328 5.55591 5.96369 6.42540 6.49567 6.82339 7.15049 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.183 4.183 2 C 0.116 3.884 3 C -0.142 4.142 4 C -0.184 4.184 5 O -0.348 6.348 6 C 0.476 3.524 7 O -0.500 6.500 8 C -0.111 4.111 9 H 0.129 0.871 10 C -0.137 4.137 11 C 0.133 3.867 12 H 0.118 0.882 13 N -0.710 5.710 14 C 0.408 3.592 15 N -0.539 5.539 16 C 0.155 3.845 17 C -0.233 4.233 18 C -0.059 4.059 19 O -0.532 6.532 20 Si 0.679 3.321 21 C -0.005 4.005 22 C -0.239 4.239 23 C -0.125 4.125 24 H 0.061 0.939 25 H 0.073 0.927 26 H 0.082 0.918 27 H 0.067 0.933 28 H 0.080 0.920 29 H 0.067 0.933 30 H 0.083 0.917 31 H 0.073 0.927 32 H 0.062 0.938 33 H 0.093 0.907 34 H 0.088 0.912 35 H 0.408 0.592 36 H 0.155 0.845 37 H 0.116 0.884 38 H 0.375 0.625 39 H -0.256 1.256 40 H -0.259 1.259 41 H 0.136 0.864 42 H 0.134 0.866 43 H 0.089 0.911 44 H 0.104 0.896 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.651 0.575 -1.198 2.965 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.241 4.241 2 C 0.080 3.920 3 C -0.199 4.199 4 C -0.241 4.241 5 O -0.266 6.266 6 C 0.319 3.681 7 O -0.387 6.387 8 C -0.131 4.131 9 H 0.147 0.853 10 C -0.176 4.176 11 C 0.027 3.973 12 H 0.136 0.864 13 N -0.342 5.342 14 C 0.173 3.827 15 N -0.256 5.256 16 C -0.002 4.002 17 C -0.238 4.238 18 C -0.170 4.170 19 O -0.338 6.338 20 Si 0.581 3.419 21 C -0.031 4.031 22 C -0.264 4.264 23 C -0.163 4.163 24 H 0.080 0.920 25 H 0.092 0.908 26 H 0.101 0.899 27 H 0.086 0.914 28 H 0.098 0.902 29 H 0.086 0.914 30 H 0.101 0.899 31 H 0.092 0.908 32 H 0.081 0.919 33 H 0.111 0.889 34 H 0.107 0.893 35 H 0.245 0.755 36 H 0.172 0.828 37 H 0.134 0.866 38 H 0.223 0.777 39 H -0.181 1.181 40 H -0.183 1.183 41 H 0.154 0.846 42 H 0.152 0.848 43 H 0.107 0.893 44 H 0.123 0.877 Dipole moment (debyes) X Y Z Total from point charges 1.653 0.077 -1.459 2.206 hybrid contribution 0.370 1.426 0.283 1.500 sum 2.024 1.504 -1.176 2.782 Atomic orbital electron populations 1.22494 0.93893 1.04688 1.02986 1.22240 0.94472 0.92391 0.82854 1.21870 1.02334 0.92422 1.03288 1.22494 1.01761 1.03086 0.96725 1.86559 1.69577 1.25201 1.45240 1.23249 0.77341 0.80716 0.86840 1.90597 1.35149 1.70049 1.42931 1.22319 1.02773 0.95809 0.92197 0.85265 1.23539 1.00689 0.97978 0.95409 1.22466 0.88142 0.91936 0.94788 0.86414 1.44478 1.17477 1.65457 1.06742 1.18431 0.89295 0.89181 0.85804 1.67171 1.24171 1.17078 1.17176 1.22281 0.97330 0.93227 0.87402 1.20927 0.96774 1.08414 0.97717 1.24754 1.13041 0.92281 0.86913 1.86595 1.56027 1.32444 1.58749 0.95100 0.75109 0.87424 0.84277 1.21202 0.96415 0.90989 0.94443 1.21482 1.00176 1.10217 0.94519 1.23368 1.03630 0.94071 0.95229 0.91967 0.90820 0.89881 0.91355 0.90151 0.91386 0.89854 0.90824 0.91904 0.88884 0.89343 0.75516 0.82800 0.86574 0.77731 1.18079 1.18345 0.84629 0.84802 0.89272 0.87723 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.13 8.37 37.16 0.31 0.18 16 2 C 0.12 0.08 1.13 -90.62 -0.10 -0.02 16 3 C -0.14 0.14 8.85 37.16 0.33 0.47 16 4 C -0.18 -0.11 8.37 37.16 0.31 0.20 16 5 O -0.35 -0.50 9.89 -39.26 -0.39 -0.88 16 6 C 0.48 0.49 6.80 36.01 0.24 0.74 16 7 O -0.50 -1.58 11.40 -18.75 -0.21 -1.79 16 8 C -0.11 0.23 4.26 -90.96 -0.39 -0.15 16 9 H 0.13 -0.51 8.14 -51.93 -0.42 -0.93 16 10 C -0.14 0.33 7.43 -25.92 -0.19 0.14 16 11 C 0.13 -0.35 4.03 -67.12 -0.27 -0.62 16 12 H 0.12 -0.46 6.10 -51.93 -0.32 -0.78 16 13 N -0.71 0.43 5.53 -53.14 -0.29 0.14 16 14 C 0.41 0.51 7.65 -155.03 -1.19 -0.67 16 15 N -0.54 -1.41 10.39 -12.44 -0.13 -1.54 16 16 C 0.16 0.17 9.84 -17.57 -0.17 0.00 16 17 C -0.23 -0.08 5.36 -104.46 -0.56 -0.64 16 18 C -0.06 0.02 2.82 36.01 0.10 0.12 16 19 O -0.53 -0.59 12.84 -35.23 -0.45 -1.04 16 20 Si 0.68 -0.62 29.91 -169.99 -5.08 -5.70 16 21 C 0.00 0.00 9.84 -39.32 -0.39 -0.39 16 22 C -0.24 0.00 9.29 -39.22 -0.36 -0.37 16 23 C -0.12 0.29 7.16 -25.92 -0.19 0.11 16 24 H 0.06 0.03 8.14 -51.93 -0.42 -0.39 16 25 H 0.07 -0.03 8.14 -51.93 -0.42 -0.45 16 26 H 0.08 0.20 5.89 -51.93 -0.31 -0.11 16 27 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 28 H 0.08 -0.17 8.14 -51.93 -0.42 -0.59 16 29 H 0.07 -0.07 8.14 -51.93 -0.42 -0.49 16 30 H 0.08 0.20 5.89 -51.93 -0.31 -0.11 16 31 H 0.07 -0.04 8.14 -51.93 -0.42 -0.46 16 32 H 0.06 0.02 8.14 -51.93 -0.42 -0.40 16 33 H 0.09 -0.10 8.10 -51.93 -0.42 -0.52 16 34 H 0.09 -0.28 8.14 -51.93 -0.42 -0.70 16 35 H 0.41 -0.23 8.85 -40.82 -0.36 -0.59 16 36 H 0.16 -0.09 4.85 -52.49 -0.25 -0.34 16 37 H 0.12 -0.13 7.96 -51.93 -0.41 -0.55 16 38 H 0.38 -0.56 8.70 45.56 0.40 -0.16 16 39 H -0.26 -0.60 7.11 56.52 0.40 -0.20 16 40 H -0.26 -0.27 7.01 56.52 0.40 0.13 16 41 H 0.14 -0.14 8.06 -52.49 -0.42 -0.57 16 42 H 0.13 -0.29 6.03 -52.49 -0.32 -0.61 16 43 H 0.09 -0.28 8.14 -51.93 -0.42 -0.70 16 44 H 0.10 -0.10 7.41 -51.93 -0.38 -0.48 16 LS Contribution 354.51 15.07 5.34 5.34 Total: 0.00 -6.65 354.51 -10.27 -16.92 By element: Atomic # 1 Polarization: -3.98 SS G_CDS: -6.54 Total: -10.52 kcal Atomic # 6 Polarization: 1.59 SS G_CDS: -2.51 Total: -0.92 kcal Atomic # 7 Polarization: -0.98 SS G_CDS: -0.42 Total: -1.40 kcal Atomic # 8 Polarization: -2.66 SS G_CDS: -1.05 Total: -3.72 kcal Atomic # 14 Polarization: -0.62 SS G_CDS: -5.08 Total: -5.70 kcal Total LS contribution 5.34 Total: 5.34 kcal Total: -6.65 -10.27 -16.92 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_12626396_13915762.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -29.668 kcal (2) G-P(sol) polarization free energy of solvation -6.654 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -36.322 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.265 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.919 kcal (6) G-S(sol) free energy of system = (1) + (5) -46.587 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.68 seconds