Wall clock time and date at job start Mon Mar 8 2021 05:43:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50696 * 1 3 3 C 1.33330 * 125.95564 * 2 1 4 4 C 1.50698 * 122.70706 * 0.02562 * 3 2 1 5 5 O 1.42901 * 109.47383 * 44.28521 * 4 3 2 6 6 Si 1.86303 * 109.47051 * 164.28406 * 4 3 2 7 7 N 1.32117 * 114.57951 * 180.02562 * 3 2 1 8 8 C 1.29682 * 116.86736 * 359.97438 * 7 3 2 9 9 N 1.38617 * 124.94848 * 179.97438 * 8 7 3 10 10 C 1.46497 * 120.00004 * 180.02562 * 9 8 7 11 11 H 1.08996 * 112.85212 * 23.80176 * 10 9 8 12 12 C 1.53786 * 113.61457 * 154.99982 * 10 9 8 13 13 C 1.53782 * 87.08056 * 140.06600 * 12 10 9 14 14 H 1.08997 * 113.61552 * 89.11966 * 13 12 10 15 15 C 1.50707 * 113.61077 * 220.01921 * 13 12 10 16 16 O 1.20824 * 119.99832 * 359.97438 * 15 13 12 17 17 O 1.34221 * 119.99771 * 179.97438 * 15 13 12 18 18 C 1.45202 * 117.00236 * 179.97438 * 17 15 13 19 19 C 1.52999 * 109.46650 * 60.00302 * 18 17 15 20 20 C 1.52994 * 109.47473 * 180.02562 * 18 17 15 21 21 C 1.52993 * 109.47111 * 300.00526 * 18 17 15 22 22 C 1.53778 * 113.69144 * 252.53291 * 10 9 8 23 23 S 1.70963 * 110.10135 * 0.24511 * 8 7 3 24 24 H 1.08998 * 109.47352 * 84.36604 * 1 2 3 25 25 H 1.08994 * 109.47288 * 204.37219 * 1 2 3 26 26 H 1.09008 * 109.46877 * 324.37014 * 1 2 3 27 27 H 1.09002 * 109.47122 * 284.27941 * 4 3 2 28 28 H 0.96700 * 113.99822 * 59.99525 * 5 4 3 29 29 H 1.48502 * 110.00080 * 58.68109 * 6 4 3 30 30 H 1.48504 * 109.99830 * 179.97438 * 6 4 3 31 31 H 0.97001 * 119.99892 * 359.97438 * 9 8 7 32 32 H 1.08998 * 113.61201 * 25.51102 * 12 10 9 33 33 H 1.09001 * 113.60966 * 254.61017 * 12 10 9 34 34 H 1.09002 * 109.47563 * 59.99900 * 19 18 17 35 35 H 1.08999 * 109.47119 * 180.02562 * 19 18 17 36 36 H 1.09005 * 109.47211 * 300.00217 * 19 18 17 37 37 H 1.09002 * 109.47481 * 59.99974 * 20 18 17 38 38 H 1.08999 * 109.46992 * 180.02562 * 20 18 17 39 39 H 1.09004 * 109.47192 * 300.00013 * 20 18 17 40 40 H 1.09007 * 109.47575 * 59.99389 * 21 18 17 41 41 H 1.08999 * 109.47123 * 179.97438 * 21 18 17 42 42 H 1.08998 * 109.47564 * 299.99617 * 21 18 17 43 43 H 1.09001 * 113.61477 * 105.45642 * 22 10 9 44 44 H 1.09006 * 113.61100 * 334.55737 * 22 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2898 1.0793 0.0000 4 6 1.7415 2.4830 0.0006 5 8 0.6701 2.5755 0.9417 6 14 3.0906 3.6765 0.4762 7 7 3.5850 0.8187 -0.0005 8 6 3.9314 -0.4310 -0.0005 9 7 5.2384 -0.8928 -0.0015 10 6 5.5065 -2.3330 -0.0019 11 1 4.6801 -2.9173 -0.4067 12 6 6.8742 -2.7049 -0.5984 13 6 6.9921 -3.7489 0.5245 14 1 6.5719 -4.7202 0.2636 15 6 8.3755 -3.8475 1.1143 16 8 9.2624 -3.1420 0.6955 17 8 8.6221 -4.7190 2.1048 18 6 9.9774 -4.7603 2.6244 19 6 10.3511 -3.3860 3.1835 20 6 10.0651 -5.8055 3.7381 21 6 10.9440 -5.1329 1.4986 22 6 6.0360 -2.8633 1.3409 23 16 2.5412 -1.4261 -0.0065 24 1 -0.3634 0.1009 -1.0227 25 1 -0.3633 -0.9360 0.4241 26 1 -0.3633 0.8354 0.5987 27 1 1.3728 2.7294 -0.9952 28 1 0.9264 2.3689 1.8509 29 1 4.2245 3.5673 -0.4766 30 1 2.5627 5.0645 0.4798 31 1 5.9755 -0.2622 -0.0027 32 1 7.6120 -1.9055 -0.5307 33 1 6.8116 -3.1412 -1.5953 34 1 9.6624 -3.1204 3.9855 35 1 11.3686 -3.4167 3.5731 36 1 10.2887 -2.6415 2.3897 37 1 9.7989 -6.7845 3.3395 38 1 11.0824 -5.8361 4.1284 39 1 9.3764 -5.5404 4.5404 40 1 10.8817 -4.3885 0.7047 41 1 11.9614 -5.1634 1.8885 42 1 10.6778 -6.1120 1.1002 43 1 5.2969 -3.4274 1.9097 44 1 6.5448 -2.1071 1.9389 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_12626396_15704122.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 05:43:18 Heat of formation + Delta-G solvation = -44.611448 kcal Electronic energy + Delta-G solvation = -25692.724087 eV Core-core repulsion = 21932.566065 eV Total energy + Delta-G solvation = -3760.158023 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 327.134 amu Computer time = 0.67 seconds Orbital eigenvalues (eV) -42.18714 -41.04281 -40.24688 -37.97027 -37.57072 -35.47768 -34.98322 -32.58600 -29.36726 -28.41615 -28.40539 -27.63589 -27.07142 -25.60089 -24.41409 -23.28913 -21.58303 -20.66257 -20.14150 -19.30271 -18.39461 -17.82203 -17.54049 -17.40767 -17.09400 -16.63677 -16.30221 -16.25967 -15.59305 -15.46551 -15.21889 -14.84426 -14.67912 -14.32544 -14.11290 -13.83396 -13.78569 -13.58240 -13.50541 -13.34291 -13.19227 -12.99546 -12.92625 -12.80506 -12.75175 -12.50697 -12.44962 -12.23625 -12.14984 -11.92727 -11.81847 -11.40635 -11.05088 -10.89360 -10.55500 -10.30372 -10.00607 -8.64967 -4.77364 0.02456 0.17213 0.77843 1.13508 1.46708 1.51139 1.86989 1.92928 1.99651 2.25867 3.01943 3.07966 3.35628 3.42217 3.47720 3.53822 3.66114 3.73549 3.77315 3.89085 4.06480 4.19309 4.33635 4.38448 4.42582 4.48684 4.53818 4.54006 4.56277 4.66013 4.69764 4.71535 4.78565 4.81422 4.82511 4.87074 4.93712 5.02382 5.14642 5.22864 5.24627 5.34250 5.51870 5.57540 6.23578 6.51674 6.79083 6.95945 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.078 4.078 2 C -0.229 4.229 3 C 0.062 3.938 4 C -0.034 4.034 5 O -0.535 6.535 6 Si 0.722 3.278 7 N -0.542 5.542 8 C 0.318 3.682 9 N -0.682 5.682 10 C 0.130 3.870 11 H 0.114 0.886 12 C -0.122 4.122 13 C -0.111 4.111 14 H 0.131 0.869 15 C 0.476 3.524 16 O -0.499 6.499 17 O -0.348 6.348 18 C 0.116 3.884 19 C -0.184 4.184 20 C -0.142 4.142 21 C -0.184 4.184 22 C -0.135 4.135 23 S 0.098 5.902 24 H 0.067 0.933 25 H 0.062 0.938 26 H 0.101 0.899 27 H 0.119 0.881 28 H 0.380 0.620 29 H -0.257 1.257 30 H -0.264 1.264 31 H 0.415 0.585 32 H 0.107 0.893 33 H 0.091 0.909 34 H 0.062 0.938 35 H 0.073 0.927 36 H 0.082 0.918 37 H 0.067 0.933 38 H 0.080 0.920 39 H 0.067 0.933 40 H 0.083 0.917 41 H 0.073 0.927 42 H 0.062 0.938 43 H 0.092 0.908 44 H 0.096 0.904 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.203 -4.583 2.947 5.453 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.138 4.138 2 C -0.352 4.352 3 C -0.068 4.068 4 C -0.148 4.148 5 O -0.340 6.340 6 Si 0.623 3.377 7 N -0.268 5.268 8 C -0.053 4.053 9 N -0.322 5.322 10 C 0.024 3.976 11 H 0.132 0.868 12 C -0.161 4.161 13 C -0.130 4.130 14 H 0.149 0.851 15 C 0.319 3.681 16 O -0.387 6.387 17 O -0.265 6.265 18 C 0.081 3.919 19 C -0.241 4.241 20 C -0.199 4.199 21 C -0.241 4.241 22 C -0.175 4.175 23 S 0.347 5.653 24 H 0.086 0.914 25 H 0.081 0.919 26 H 0.119 0.881 27 H 0.136 0.864 28 H 0.227 0.773 29 H -0.181 1.181 30 H -0.190 1.190 31 H 0.254 0.746 32 H 0.126 0.874 33 H 0.109 0.891 34 H 0.081 0.919 35 H 0.092 0.908 36 H 0.101 0.899 37 H 0.087 0.913 38 H 0.099 0.901 39 H 0.086 0.914 40 H 0.101 0.899 41 H 0.092 0.908 42 H 0.081 0.919 43 H 0.110 0.890 44 H 0.115 0.885 Dipole moment (debyes) X Y Z Total from point charges 0.929 -4.398 2.053 4.942 hybrid contribution 0.045 0.460 -0.509 0.687 sum 0.975 -3.938 1.545 4.341 Atomic orbital electron populations 1.20356 0.86538 1.03724 1.03143 1.25175 1.01282 0.92642 1.16087 1.20087 0.86651 0.97253 1.02792 1.24564 0.98095 0.95791 0.96325 1.86452 1.35258 1.91799 1.20483 0.93759 0.77078 0.75353 0.91487 1.65894 1.17239 1.16679 1.26991 1.23291 0.91807 0.91519 0.98696 1.43912 1.01915 1.06373 1.80021 1.22553 0.98112 0.79959 0.96997 0.86779 1.23361 0.96123 0.98323 0.98250 1.22306 0.90706 1.01600 0.98431 0.85103 1.23188 0.90730 0.76886 0.77288 1.90602 1.46407 1.42082 1.59580 1.86555 1.33961 1.57093 1.48878 1.22243 0.78538 0.96986 0.94161 1.22497 1.02580 0.96627 1.02371 1.21870 1.03137 0.98023 0.96894 1.22498 0.99354 1.02882 0.99369 1.23547 0.98040 0.98548 0.97344 1.83928 0.96559 1.10752 1.74022 0.91386 0.91911 0.88078 0.86419 0.77258 1.18140 1.19039 0.74639 0.87438 0.89061 0.91907 0.90813 0.89887 0.91347 0.90139 0.91351 0.89864 0.90811 0.91894 0.88982 0.88502 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.08 -0.01 9.97 36.00 0.36 0.35 16 2 C -0.23 -0.34 6.49 -36.02 -0.23 -0.57 16 3 C 0.06 0.14 6.00 -84.18 -0.50 -0.37 16 4 C -0.03 -0.04 2.74 36.00 0.10 0.06 16 5 O -0.54 -0.09 10.22 -35.23 -0.36 -0.45 16 6 Si 0.72 0.96 31.88 -169.99 -5.42 -4.46 16 7 N -0.54 -1.58 8.61 -11.36 -0.10 -1.68 16 8 C 0.32 0.42 8.24 -87.68 -0.72 -0.30 16 9 N -0.68 0.56 5.52 -54.99 -0.30 0.26 16 10 C 0.13 -0.36 4.23 -67.12 -0.28 -0.64 16 11 H 0.11 -0.39 7.05 -51.93 -0.37 -0.76 16 12 C -0.12 0.33 7.16 -25.92 -0.19 0.14 16 13 C -0.11 0.28 4.26 -90.96 -0.39 -0.11 16 14 H 0.13 -0.56 8.14 -51.93 -0.42 -0.98 16 15 C 0.48 0.26 6.79 36.01 0.24 0.51 16 16 O -0.50 -1.34 11.40 -18.75 -0.21 -1.56 16 17 O -0.35 -0.33 9.89 -39.23 -0.39 -0.72 16 18 C 0.12 0.03 1.13 -90.63 -0.10 -0.07 16 19 C -0.18 -0.05 8.37 37.16 0.31 0.26 16 20 C -0.14 0.19 8.85 37.15 0.33 0.52 16 21 C -0.18 -0.06 8.37 37.15 0.31 0.25 16 22 C -0.14 0.40 7.43 -25.92 -0.19 0.21 16 23 S 0.10 0.03 21.68 -107.50 -2.33 -2.30 16 24 H 0.07 0.01 8.14 -51.93 -0.42 -0.41 16 25 H 0.06 -0.05 8.14 -51.93 -0.42 -0.47 16 26 H 0.10 0.00 5.67 -51.92 -0.29 -0.30 16 27 H 0.12 0.18 7.96 -51.93 -0.41 -0.24 16 28 H 0.38 -1.23 8.70 45.56 0.40 -0.83 16 29 H -0.26 -1.25 7.11 56.52 0.40 -0.85 16 30 H -0.26 -0.98 7.11 56.52 0.40 -0.58 16 31 H 0.41 -0.45 8.85 -40.82 -0.36 -0.81 16 32 H 0.11 -0.16 7.41 -51.93 -0.38 -0.54 16 33 H 0.09 -0.31 8.14 -51.93 -0.42 -0.73 16 34 H 0.06 0.00 8.14 -51.93 -0.42 -0.42 16 35 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 36 H 0.08 0.16 5.89 -51.93 -0.31 -0.14 16 37 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 38 H 0.08 -0.19 8.14 -51.93 -0.42 -0.62 16 39 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 40 H 0.08 0.17 5.89 -51.93 -0.31 -0.13 16 41 H 0.07 -0.05 8.14 -51.93 -0.42 -0.48 16 42 H 0.06 0.00 8.14 -51.93 -0.42 -0.42 16 43 H 0.09 -0.34 8.14 -51.93 -0.42 -0.76 16 44 H 0.10 -0.20 8.09 -51.93 -0.42 -0.62 16 LS Contribution 366.66 15.07 5.53 5.53 Total: 0.00 -6.48 366.66 -11.27 -17.75 By element: Atomic # 1 Polarization: -5.88 SS G_CDS: -6.73 Total: -12.61 kcal Atomic # 6 Polarization: 1.18 SS G_CDS: -0.96 Total: 0.22 kcal Atomic # 7 Polarization: -1.02 SS G_CDS: -0.40 Total: -1.42 kcal Atomic # 8 Polarization: -1.76 SS G_CDS: -0.96 Total: -2.72 kcal Atomic # 14 Polarization: 0.96 SS G_CDS: -5.42 Total: -4.46 kcal Atomic # 16 Polarization: 0.03 SS G_CDS: -2.33 Total: -2.30 kcal Total LS contribution 5.53 Total: 5.53 kcal Total: -6.48 -11.27 -17.75 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_12626396_15704122.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -26.860 kcal (2) G-P(sol) polarization free energy of solvation -6.478 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -33.338 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.273 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.751 kcal (6) G-S(sol) free energy of system = (1) + (5) -44.611 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.68 seconds