Wall clock time and date at job start Mon Mar 8 2021 05:53:46 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 C 1.53000 * 109.47007 * 2 1 4 4 C 1.52997 * 109.47314 * 239.99883 * 2 1 3 5 5 O 1.45201 * 109.47346 * 120.00147 * 2 1 3 6 6 C 1.34638 * 116.99819 * 59.99666 * 5 2 1 7 7 O 1.21513 * 120.00208 * 0.02562 * 6 5 2 8 8 N 1.34777 * 119.99834 * 179.72501 * 6 5 2 9 9 C 1.46499 * 120.00199 * 180.27541 * 8 6 5 10 10 H 1.09003 * 112.84940 * 336.20268 * 9 8 6 11 11 C 1.53783 * 113.61254 * 107.50239 * 9 8 6 12 12 C 1.53783 * 87.07930 * 139.98361 * 11 9 8 13 13 H 1.09007 * 113.61362 * 89.11667 * 12 11 9 14 14 C 1.53002 * 113.69293 * 220.00864 * 12 11 9 15 15 N 1.46497 * 109.46747 * 272.53546 * 14 12 11 16 16 C 1.38412 * 119.99648 * 179.97438 * 15 14 12 17 17 N 1.32498 * 119.21627 * 359.73381 * 16 15 14 18 18 C 1.32274 * 120.73860 * 179.71274 * 17 16 15 19 19 C 1.38606 * 119.19447 * 0.55141 * 18 17 16 20 20 C 1.50702 * 120.71741 * 179.70740 * 19 18 17 21 21 O 1.42904 * 109.47354 * 120.02062 * 20 19 18 22 22 Si 1.86304 * 109.47348 * 0.02562 * 20 19 18 23 23 C 1.38601 * 118.56054 * 359.72201 * 19 18 17 24 24 N 1.32271 * 119.19722 * 0.02562 * 23 19 18 25 25 C 1.53780 * 113.61714 * 205.00175 * 9 8 6 26 26 H 1.08997 * 109.47392 * 299.99655 * 1 2 3 27 27 H 1.08999 * 109.47056 * 59.99890 * 1 2 3 28 28 H 1.08999 * 109.47175 * 179.97438 * 1 2 3 29 29 H 1.08997 * 109.47042 * 180.02562 * 3 2 1 30 30 H 1.08999 * 109.47303 * 299.99959 * 3 2 1 31 31 H 1.09003 * 109.46990 * 60.00348 * 3 2 1 32 32 H 1.08999 * 109.47400 * 300.00352 * 4 2 1 33 33 H 1.09013 * 109.46945 * 59.99983 * 4 2 1 34 34 H 1.08997 * 109.47343 * 179.97438 * 4 2 1 35 35 H 0.97001 * 119.99727 * 0.28438 * 8 6 5 36 36 H 1.08995 * 113.61760 * 254.52995 * 11 9 8 37 37 H 1.09000 * 113.61177 * 25.43853 * 11 9 8 38 38 H 1.09000 * 109.46632 * 32.53344 * 14 12 11 39 39 H 1.08995 * 109.46975 * 152.53490 * 14 12 11 40 40 H 0.96993 * 120.00850 * 0.02562 * 15 14 12 41 41 H 1.07999 * 120.39868 * 180.25305 * 18 17 16 42 42 H 1.09000 * 109.47314 * 240.02026 * 20 19 18 43 43 H 0.96700 * 114.00259 * 180.02562 * 21 20 19 44 44 H 1.48507 * 109.99912 * 298.68251 * 22 20 19 45 45 H 1.48501 * 109.99911 * 59.99725 * 22 20 19 46 46 H 1.08001 * 120.39855 * 180.02562 * 23 19 18 47 47 H 1.09000 * 113.61190 * 334.57001 * 25 9 8 48 48 H 1.09002 * 113.61034 * 105.38881 * 25 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0399 1.4425 0.0000 4 6 2.0400 -0.7213 -1.2492 5 8 2.0140 -0.6845 1.1855 6 6 1.6522 -1.9723 1.3383 7 8 0.9515 -2.5097 0.5035 8 7 2.0722 -2.6672 2.4140 9 6 1.6835 -4.0703 2.5772 10 1 0.7689 -4.3213 2.0401 11 6 2.8346 -5.0606 2.3338 12 6 2.2912 -5.8638 3.5273 13 1 1.5432 -6.6065 3.2496 14 6 3.3843 -6.4320 4.4347 15 7 3.8082 -7.7397 3.9284 16 6 4.7945 -8.4511 4.5893 17 7 5.3484 -7.9324 5.6755 18 6 6.2895 -8.5886 6.3337 19 6 6.7021 -9.8271 5.8678 20 6 7.7762 -10.6015 6.5872 21 8 7.2505 -11.8590 7.0165 22 14 8.3541 -9.6316 8.0693 23 6 6.1055 -10.3377 4.7257 24 7 5.1664 -9.6321 4.1177 25 6 1.6891 -4.5449 4.0399 26 1 -0.3634 0.5138 0.8900 27 1 -0.3633 0.5138 -0.8900 28 1 -0.3633 -1.0276 -0.0005 29 1 3.1299 1.4425 -0.0005 30 1 1.6766 1.9564 -0.8900 31 1 1.6766 1.9563 0.8900 32 1 1.6767 -1.7489 -1.2493 33 1 1.6766 -0.2074 -2.1393 34 1 3.1300 -0.7209 -1.2494 35 1 2.6318 -2.2383 3.0802 36 1 2.7625 -5.5887 1.3831 37 1 3.8222 -4.6336 2.5082 38 1 4.2367 -5.7529 4.4457 39 1 2.9950 -6.5430 5.4467 40 1 3.3983 -8.1067 3.1296 41 1 6.7344 -8.1624 7.2208 42 1 8.6161 -10.7699 5.9132 43 1 7.8884 -12.4116 7.4885 44 1 8.9322 -8.3349 7.6338 45 1 7.2181 -9.3955 8.9961 46 1 6.4040 -11.3001 4.3369 47 1 2.3635 -3.9769 4.6807 48 1 0.6922 -4.6553 4.4669 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_12628478_12175864.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 05:53:46 Heat of formation + Delta-G solvation = -26.447583 kcal Electronic energy + Delta-G solvation = -28473.977271 eV Core-core repulsion = 24339.065206 eV Total energy + Delta-G solvation = -4134.912066 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 337.183 amu Computer time = 0.87 seconds Orbital eigenvalues (eV) -42.07147 -41.79013 -40.53456 -38.21230 -37.85984 -36.63663 -35.25555 -34.70703 -34.15746 -32.61934 -29.02322 -28.32182 -28.28145 -26.93346 -26.28499 -25.88415 -24.46024 -22.97064 -22.40229 -21.41577 -20.66115 -19.39945 -19.01334 -18.72870 -18.33322 -17.70138 -17.06278 -16.87997 -16.69771 -16.46702 -16.14651 -15.82959 -15.67949 -15.34913 -15.31475 -15.22921 -14.85701 -14.62923 -14.42493 -14.01323 -13.67298 -13.62373 -13.42194 -13.33278 -13.15121 -13.04368 -12.83349 -12.81899 -12.49607 -12.37075 -12.26775 -12.17791 -11.92178 -11.81551 -11.80047 -11.65481 -11.28710 -11.23985 -10.94812 -10.58777 -10.14949 -9.96734 -9.08246 -5.07423 0.05801 0.17312 1.20160 1.21261 1.56139 1.79426 1.87637 1.89187 2.80540 3.06841 3.14326 3.27529 3.31924 3.35236 3.57767 3.61386 3.63889 3.78505 3.78880 3.84145 3.87577 3.97949 4.05509 4.14216 4.27714 4.45583 4.50172 4.54663 4.56767 4.59797 4.62448 4.63550 4.73209 4.77129 4.78701 4.85192 4.87880 4.88849 4.93818 5.06579 5.10476 5.20711 5.34374 5.37140 5.48988 5.61437 5.76230 5.99388 6.39471 6.42891 6.57102 7.29495 7.43787 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.184 4.184 2 C 0.136 3.864 3 C -0.142 4.142 4 C -0.184 4.184 5 O -0.366 6.366 6 C 0.650 3.350 7 O -0.567 6.567 8 N -0.702 5.702 9 C 0.141 3.859 10 H 0.121 0.879 11 C -0.148 4.148 12 C -0.123 4.123 13 H 0.104 0.896 14 C 0.149 3.851 15 N -0.694 5.694 16 C 0.566 3.434 17 N -0.562 5.562 18 C 0.194 3.806 19 C -0.249 4.249 20 C -0.050 4.050 21 O -0.548 6.548 22 Si 0.680 3.320 23 C 0.228 3.772 24 N -0.567 5.567 25 C -0.133 4.133 26 H 0.060 0.940 27 H 0.072 0.928 28 H 0.087 0.913 29 H 0.067 0.933 30 H 0.082 0.918 31 H 0.067 0.933 32 H 0.087 0.913 33 H 0.072 0.928 34 H 0.059 0.941 35 H 0.407 0.593 36 H 0.077 0.923 37 H 0.089 0.911 38 H 0.070 0.930 39 H 0.071 0.929 40 H 0.416 0.584 41 H 0.157 0.843 42 H 0.076 0.924 43 H 0.384 0.616 44 H -0.253 1.253 45 H -0.249 1.249 46 H 0.173 0.827 47 H 0.094 0.906 48 H 0.084 0.916 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.888 -0.209 2.696 4.736 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.241 4.241 2 C 0.100 3.900 3 C -0.199 4.199 4 C -0.241 4.241 5 O -0.280 6.280 6 C 0.404 3.596 7 O -0.456 6.456 8 N -0.360 5.360 9 C 0.037 3.963 10 H 0.139 0.861 11 C -0.187 4.187 12 C -0.142 4.142 13 H 0.122 0.878 14 C 0.025 3.975 15 N -0.331 5.331 16 C 0.209 3.791 17 N -0.284 5.284 18 C 0.026 3.974 19 C -0.257 4.257 20 C -0.162 4.162 21 O -0.354 6.354 22 Si 0.581 3.419 23 C 0.059 3.941 24 N -0.289 5.289 25 C -0.172 4.172 26 H 0.079 0.921 27 H 0.091 0.909 28 H 0.106 0.894 29 H 0.086 0.914 30 H 0.101 0.899 31 H 0.086 0.914 32 H 0.106 0.894 33 H 0.091 0.909 34 H 0.078 0.922 35 H 0.242 0.758 36 H 0.096 0.904 37 H 0.108 0.892 38 H 0.089 0.911 39 H 0.089 0.911 40 H 0.254 0.746 41 H 0.174 0.826 42 H 0.094 0.906 43 H 0.232 0.768 44 H -0.177 1.177 45 H -0.173 1.173 46 H 0.190 0.810 47 H 0.112 0.888 48 H 0.103 0.897 Dipole moment (debyes) X Y Z Total from point charges 2.082 1.348 1.964 3.163 hybrid contribution 0.546 -0.445 -0.109 0.712 sum 2.628 0.903 1.855 3.341 Atomic orbital electron populations 1.22520 0.93837 1.05039 1.02711 1.22116 0.94450 0.91563 0.81878 1.21878 1.02321 0.92369 1.03336 1.22520 1.01585 1.03452 0.96550 1.86310 1.71456 1.23527 1.46730 1.18180 0.78621 0.80547 0.82276 1.90914 1.41092 1.70544 1.43002 1.44763 1.55291 1.11998 1.23950 1.22535 0.99195 0.77486 0.97115 0.86074 1.23641 0.99175 0.97045 0.98867 1.22616 0.98168 0.96695 0.96769 0.87752 1.21313 0.96396 0.82538 0.97261 1.44127 1.38715 1.19757 1.30464 1.19375 0.87431 0.85967 0.86302 1.67900 1.13659 1.37019 1.09863 1.22571 0.89180 0.90108 0.95525 1.20729 1.05104 0.98564 1.01341 1.24302 0.96059 0.90498 1.05374 1.86485 1.41973 1.28840 1.78140 0.95081 0.85179 0.81370 0.80223 1.22822 0.86141 0.96866 0.88260 1.67995 1.18345 1.07501 1.35018 1.23358 1.02586 0.95308 0.95972 0.92118 0.90931 0.89441 0.91415 0.89930 0.91391 0.89431 0.90935 0.92152 0.75817 0.90397 0.89216 0.91130 0.91056 0.74619 0.82628 0.90579 0.76826 1.17742 1.17320 0.81021 0.88798 0.89743 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.29 8.37 37.16 0.31 0.02 16 2 C 0.14 0.22 1.13 -90.62 -0.10 0.12 16 3 C -0.14 0.06 8.85 37.16 0.33 0.39 16 4 C -0.18 -0.30 8.37 37.16 0.31 0.01 16 5 O -0.37 -0.99 9.94 -40.32 -0.40 -1.39 16 6 C 0.65 1.94 8.06 54.06 0.44 2.38 16 7 O -0.57 -2.99 11.48 -19.28 -0.22 -3.21 16 8 N -0.70 0.04 5.36 -57.93 -0.31 -0.27 16 9 C 0.14 -0.15 4.24 -67.12 -0.28 -0.44 16 10 H 0.12 0.03 7.46 -51.93 -0.39 -0.36 16 11 C -0.15 0.24 7.43 -25.92 -0.19 0.05 16 12 C -0.12 0.31 3.75 -89.81 -0.34 -0.02 16 13 H 0.10 -0.31 8.14 -51.92 -0.42 -0.73 16 14 C 0.15 -0.11 5.49 -4.04 -0.02 -0.14 16 15 N -0.69 -0.72 5.70 -62.31 -0.36 -1.07 16 16 C 0.57 2.16 8.43 -322.80 -2.72 -0.56 16 17 N -0.56 -2.35 9.59 -13.93 -0.13 -2.48 16 18 C 0.19 0.59 9.92 -17.23 -0.17 0.42 16 19 C -0.25 -0.52 5.43 -104.35 -0.57 -1.08 16 20 C -0.05 0.05 2.84 36.01 0.10 0.15 16 21 O -0.55 0.45 12.76 -35.23 -0.45 0.00 16 22 Si 0.68 -1.33 29.87 -169.99 -5.08 -6.41 16 23 C 0.23 0.57 10.92 -17.23 -0.19 0.38 16 24 N -0.57 -2.29 10.46 -13.93 -0.15 -2.43 16 25 C -0.13 0.39 7.39 -25.92 -0.19 0.20 16 26 H 0.06 0.08 8.14 -51.93 -0.42 -0.34 16 27 H 0.07 0.01 8.14 -51.93 -0.42 -0.41 16 28 H 0.09 0.32 5.88 -51.93 -0.31 0.01 16 29 H 0.07 -0.03 8.14 -51.93 -0.42 -0.46 16 30 H 0.08 -0.14 8.14 -51.93 -0.42 -0.57 16 31 H 0.07 -0.04 8.14 -51.93 -0.42 -0.46 16 32 H 0.09 0.33 5.88 -51.93 -0.31 0.03 16 33 H 0.07 0.02 8.14 -51.92 -0.42 -0.40 16 34 H 0.06 0.09 8.14 -51.93 -0.42 -0.34 16 35 H 0.41 -0.81 8.84 -40.82 -0.36 -1.17 16 36 H 0.08 -0.07 8.14 -51.93 -0.42 -0.49 16 37 H 0.09 -0.12 7.90 -51.93 -0.41 -0.53 16 38 H 0.07 -0.01 7.85 -51.93 -0.41 -0.42 16 39 H 0.07 0.00 8.14 -51.93 -0.42 -0.43 16 40 H 0.42 -0.07 8.59 -40.82 -0.35 -0.42 16 41 H 0.16 0.26 5.04 -52.49 -0.26 -0.01 16 42 H 0.08 -0.22 7.96 -51.93 -0.41 -0.63 16 43 H 0.38 -2.23 8.74 45.56 0.40 -1.83 16 44 H -0.25 -0.09 7.11 56.52 0.40 0.31 16 45 H -0.25 -0.32 7.11 56.52 0.40 0.08 16 46 H 0.17 0.02 8.06 -52.49 -0.42 -0.40 16 47 H 0.09 -0.34 8.08 -51.93 -0.42 -0.76 16 48 H 0.08 -0.26 8.14 -51.93 -0.42 -0.68 16 LS Contribution 389.84 15.07 5.87 5.87 Total: 0.00 -8.92 389.84 -12.00 -20.92 By element: Atomic # 1 Polarization: -3.91 SS G_CDS: -7.50 Total: -11.41 kcal Atomic # 6 Polarization: 5.17 SS G_CDS: -3.29 Total: 1.88 kcal Atomic # 7 Polarization: -5.31 SS G_CDS: -0.95 Total: -6.26 kcal Atomic # 8 Polarization: -3.53 SS G_CDS: -1.07 Total: -4.60 kcal Atomic # 14 Polarization: -1.33 SS G_CDS: -5.08 Total: -6.41 kcal Total LS contribution 5.87 Total: 5.87 kcal Total: -8.92 -12.00 -20.92 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_12628478_12175864.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -5.529 kcal (2) G-P(sol) polarization free energy of solvation -8.915 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -14.444 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.004 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.919 kcal (6) G-S(sol) free energy of system = (1) + (5) -26.448 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.87 seconds