Wall clock time and date at job start Mon Mar 8 2021 05:54:06 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53000 * 1 3 3 C 1.52995 * 109.47774 * 2 1 4 4 C 1.53006 * 109.46761 * 239.99643 * 2 1 3 5 5 O 1.45205 * 109.46882 * 120.00557 * 2 1 3 6 6 C 1.34630 * 117.00296 * 59.99147 * 5 2 1 7 7 O 1.21507 * 120.00175 * 0.02562 * 6 5 2 8 8 N 1.34780 * 120.00006 * 180.02562 * 6 5 2 9 9 C 1.46495 * 120.00120 * 180.02562 * 8 6 5 10 10 H 1.08999 * 112.85142 * 336.19380 * 9 8 6 11 11 C 1.53960 * 113.53863 * 107.50428 * 9 8 6 12 12 C 1.53772 * 87.01931 * 89.18708 * 11 9 8 13 13 H 1.09000 * 113.61664 * 270.76961 * 12 11 9 14 14 C 1.53004 * 113.61304 * 139.95011 * 12 11 9 15 15 N 1.46497 * 109.47040 * 85.86523 * 14 12 11 16 16 C 1.38611 * 120.00112 * 180.02562 * 15 14 12 17 17 N 1.29688 * 124.95092 * 359.97438 * 16 15 14 18 18 C 1.32116 * 116.86560 * 180.02562 * 17 16 15 19 19 C 1.33326 * 114.58306 * 359.97438 * 18 17 16 20 20 C 1.50699 * 125.95303 * 180.02562 * 19 18 17 21 21 O 1.42903 * 109.47152 * 300.00076 * 20 19 18 22 22 Si 1.86293 * 109.47431 * 179.97438 * 20 19 18 23 23 S 1.70972 * 124.95043 * 180.32851 * 16 15 14 24 24 C 1.53782 * 113.61432 * 204.99897 * 9 8 6 25 25 H 1.09005 * 109.46750 * 300.00600 * 1 2 3 26 26 H 1.09004 * 109.46685 * 59.99585 * 1 2 3 27 27 H 1.08998 * 109.47687 * 179.97438 * 1 2 3 28 28 H 1.08991 * 109.47368 * 180.02562 * 3 2 1 29 29 H 1.09003 * 109.46861 * 300.00195 * 3 2 1 30 30 H 1.09004 * 109.46989 * 59.99637 * 3 2 1 31 31 H 1.09002 * 109.47464 * 300.00127 * 4 2 1 32 32 H 1.08998 * 109.46470 * 60.00847 * 4 2 1 33 33 H 1.09005 * 109.46945 * 180.02562 * 4 2 1 34 34 H 0.97008 * 119.99975 * 359.97438 * 8 6 5 35 35 H 1.08995 * 113.66498 * 334.65620 * 11 9 8 36 36 H 1.09004 * 113.61310 * 203.71049 * 11 9 8 37 37 H 1.09000 * 109.47073 * 325.86461 * 14 12 11 38 38 H 1.09003 * 109.47346 * 205.85906 * 14 12 11 39 39 H 0.97004 * 120.00046 * 359.97438 * 15 14 12 40 40 H 1.08006 * 122.70903 * 179.97438 * 18 17 16 41 41 H 1.09008 * 109.47393 * 59.99471 * 20 19 18 42 42 H 0.96700 * 114.00311 * 180.02562 * 21 20 19 43 43 H 1.48501 * 109.99918 * 298.67862 * 22 20 19 44 44 H 1.48506 * 109.99973 * 59.99460 * 22 20 19 45 45 H 1.09005 * 113.61720 * 156.33553 * 24 9 8 46 46 H 1.08997 * 113.61648 * 25.43184 * 24 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0401 1.4424 0.0000 4 6 2.0399 -0.7214 -1.2493 5 8 2.0140 -0.6846 1.1855 6 6 1.6521 -1.9723 1.3383 7 8 0.9514 -2.5097 0.5036 8 7 2.0670 -2.6655 2.4172 9 6 1.6737 -4.0669 2.5831 10 1 0.7597 -4.3167 2.0443 11 6 2.8250 -5.0610 2.3450 12 6 3.1490 -4.9204 3.8416 13 1 3.8451 -4.1115 4.0636 14 6 3.5386 -6.2399 4.5110 15 7 4.9733 -6.4745 4.3296 16 6 5.5605 -7.6159 4.8529 17 7 4.9333 -8.5362 5.5174 18 6 5.6523 -9.5590 5.9444 19 6 6.9455 -9.4997 5.6255 20 6 7.9922 -10.5240 5.9805 21 8 8.0746 -10.6481 7.4018 22 14 9.6431 -9.9842 5.3069 23 16 7.2188 -8.0113 4.7237 24 6 1.6738 -4.5375 4.0472 25 1 -0.3633 0.5140 0.8900 26 1 -0.3633 0.5139 -0.8900 27 1 -0.3634 -1.0276 -0.0005 28 1 3.1301 1.4423 -0.0005 29 1 1.6768 1.9562 -0.8900 30 1 1.6768 1.9563 0.8900 31 1 1.6766 -1.7490 -1.2493 32 1 1.6766 -0.2074 -2.1392 33 1 3.1300 -0.7218 -1.2491 34 1 2.6267 -2.2367 3.0834 35 1 3.6072 -4.6760 1.6909 36 1 2.4890 -6.0588 2.0628 37 1 2.9768 -7.0568 4.0581 38 1 3.3107 -6.1885 5.5757 39 1 5.5121 -5.8315 3.8427 40 1 5.2268 -10.3772 6.5066 41 1 7.7205 -11.4866 5.5470 42 1 8.7304 -11.2917 7.7031 43 1 9.5792 -9.8828 3.8268 44 1 10.0252 -8.6728 5.8898 45 1 1.0225 -5.3920 4.2313 46 1 1.5281 -3.7305 4.7652 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_12628558_15704118.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 05:54:06 Heat of formation + Delta-G solvation = -33.485886 kcal Electronic energy + Delta-G solvation = -26940.946659 eV Core-core repulsion = 22960.307546 eV Total energy + Delta-G solvation = -3980.639112 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 342.145 amu Computer time = 0.78 seconds Orbital eigenvalues (eV) -41.90876 -40.86144 -40.38772 -38.09697 -37.77392 -36.52996 -35.23915 -33.96597 -31.61364 -29.21906 -28.34962 -28.30800 -26.96361 -26.34597 -24.94188 -23.95450 -23.19184 -21.14616 -20.72451 -20.46680 -19.57727 -19.16380 -18.45278 -17.59495 -17.49325 -17.11998 -16.89781 -16.46119 -16.23492 -15.80869 -15.65576 -15.51366 -15.34787 -15.14322 -14.89573 -14.48657 -14.44772 -14.26432 -14.00257 -13.73488 -13.43953 -13.38281 -13.06042 -12.87610 -12.84927 -12.80993 -12.43744 -12.42078 -12.29760 -12.16073 -12.06159 -11.81946 -11.57521 -11.32090 -11.13091 -10.99734 -10.61992 -10.31531 -10.22286 -10.12750 -8.72487 -5.21280 -0.02504 0.11084 0.67400 1.12412 1.23504 1.58136 1.83636 1.93304 2.05448 2.10118 3.05937 3.23237 3.31372 3.45150 3.52107 3.62327 3.75495 3.77777 3.81174 3.94947 3.99911 4.02904 4.35826 4.42329 4.46341 4.51884 4.54819 4.55783 4.61067 4.62712 4.75227 4.76153 4.77761 4.82173 4.85699 4.89225 4.91080 4.96131 5.06822 5.12016 5.31786 5.34514 5.46100 5.58032 5.80897 6.01434 6.36591 6.59066 7.00838 7.39064 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.184 4.184 2 C 0.137 3.863 3 C -0.142 4.142 4 C -0.184 4.184 5 O -0.365 6.365 6 C 0.653 3.347 7 O -0.564 6.564 8 N -0.695 5.695 9 C 0.137 3.863 10 H 0.111 0.889 11 C -0.148 4.148 12 C -0.128 4.128 13 H 0.097 0.903 14 C 0.145 3.855 15 N -0.692 5.692 16 C 0.330 3.670 17 N -0.547 5.547 18 C 0.124 3.876 19 C -0.262 4.262 20 C -0.017 4.017 21 O -0.545 6.545 22 Si 0.667 3.333 23 S 0.066 5.934 24 C -0.132 4.132 25 H 0.060 0.940 26 H 0.072 0.928 27 H 0.087 0.913 28 H 0.067 0.933 29 H 0.082 0.918 30 H 0.067 0.933 31 H 0.087 0.913 32 H 0.072 0.928 33 H 0.059 0.941 34 H 0.406 0.594 35 H 0.074 0.926 36 H 0.098 0.902 37 H 0.073 0.927 38 H 0.071 0.929 39 H 0.414 0.586 40 H 0.179 0.821 41 H 0.082 0.918 42 H 0.383 0.617 43 H -0.242 1.242 44 H -0.239 1.239 45 H 0.105 0.895 46 H 0.081 0.919 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.839 -0.244 0.445 2.884 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.241 4.241 2 C 0.100 3.900 3 C -0.199 4.199 4 C -0.241 4.241 5 O -0.280 6.280 6 C 0.406 3.594 7 O -0.452 6.452 8 N -0.354 5.354 9 C 0.033 3.967 10 H 0.129 0.871 11 C -0.186 4.186 12 C -0.147 4.147 13 H 0.115 0.885 14 C 0.019 3.981 15 N -0.331 5.331 16 C -0.041 4.041 17 N -0.273 5.273 18 C -0.026 4.026 19 C -0.385 4.385 20 C -0.130 4.130 21 O -0.352 6.352 22 Si 0.567 3.433 23 S 0.314 5.686 24 C -0.171 4.171 25 H 0.079 0.921 26 H 0.091 0.909 27 H 0.106 0.894 28 H 0.086 0.914 29 H 0.101 0.899 30 H 0.086 0.914 31 H 0.106 0.894 32 H 0.091 0.909 33 H 0.078 0.922 34 H 0.241 0.759 35 H 0.093 0.907 36 H 0.116 0.884 37 H 0.091 0.909 38 H 0.089 0.911 39 H 0.251 0.749 40 H 0.196 0.804 41 H 0.100 0.900 42 H 0.231 0.769 43 H -0.166 1.166 44 H -0.163 1.163 45 H 0.124 0.876 46 H 0.100 0.900 Dipole moment (debyes) X Y Z Total from point charges 2.539 1.223 -0.864 2.948 hybrid contribution -0.395 -0.189 0.563 0.713 sum 2.143 1.034 -0.301 2.399 Atomic orbital electron populations 1.22526 0.93789 1.05068 1.02759 1.22131 0.94487 0.91547 0.81798 1.21880 1.02317 0.92335 1.03379 1.22525 1.01575 1.03462 0.96566 1.86303 1.71468 1.23388 1.46819 1.18070 0.78630 0.80581 0.82115 1.90923 1.40835 1.70497 1.42956 1.44367 1.55534 1.11696 1.23807 1.21816 0.98996 0.78428 0.97509 0.87131 1.23615 0.98926 1.00434 0.95663 1.22923 0.97768 0.97447 0.96565 0.88451 1.21435 0.79314 0.96247 1.01068 1.44035 1.09591 1.19798 1.59702 1.23807 0.92821 0.92022 0.95402 1.66472 1.36796 1.04302 1.19728 1.21344 0.88616 0.95862 0.96824 1.24277 0.98139 1.01206 1.14831 1.23674 1.04794 0.98171 0.86396 1.86514 1.63955 1.65686 1.19051 0.95172 0.81389 0.85680 0.81055 1.84089 1.08291 1.19140 1.57038 1.23320 0.95593 1.02252 0.95929 0.92089 0.90889 0.89421 0.91412 0.89887 0.91371 0.89424 0.90884 0.92155 0.75894 0.90719 0.88367 0.90922 0.91055 0.74908 0.80449 0.90044 0.76904 1.16627 1.16291 0.87644 0.90012 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.24 8.37 37.16 0.31 0.07 16 2 C 0.14 0.17 1.13 -90.62 -0.10 0.07 16 3 C -0.14 0.11 8.85 37.16 0.33 0.43 16 4 C -0.18 -0.24 8.37 37.16 0.31 0.07 16 5 O -0.37 -0.82 9.94 -40.30 -0.40 -1.22 16 6 C 0.65 1.66 8.06 54.06 0.44 2.10 16 7 O -0.56 -2.79 11.48 -19.28 -0.22 -3.01 16 8 N -0.70 0.38 5.26 -57.84 -0.30 0.07 16 9 C 0.14 -0.19 4.33 -67.03 -0.29 -0.48 16 10 H 0.11 0.02 7.46 -51.93 -0.39 -0.37 16 11 C -0.15 0.31 7.44 -25.83 -0.19 0.12 16 12 C -0.13 0.40 3.62 -89.81 -0.33 0.08 16 13 H 0.10 -0.37 8.14 -51.93 -0.42 -0.79 16 14 C 0.14 -0.18 5.77 -4.04 -0.02 -0.20 16 15 N -0.69 0.07 5.71 -62.29 -0.36 -0.29 16 16 C 0.33 0.92 8.09 -87.68 -0.71 0.21 16 17 N -0.55 -2.35 10.14 -15.20 -0.15 -2.50 16 18 C 0.12 0.44 11.22 -19.14 -0.21 0.22 16 19 C -0.26 -0.79 5.78 -36.02 -0.21 -1.00 16 20 C -0.02 0.00 2.98 36.01 0.11 0.10 16 21 O -0.55 -0.18 12.85 -35.23 -0.45 -0.64 16 22 Si 0.67 -0.37 31.05 -169.99 -5.28 -5.65 16 23 S 0.07 0.18 20.57 -107.50 -2.21 -2.03 16 24 C -0.13 0.43 7.39 -25.92 -0.19 0.24 16 25 H 0.06 0.06 8.14 -51.93 -0.42 -0.36 16 26 H 0.07 0.00 8.14 -51.93 -0.42 -0.43 16 27 H 0.09 0.30 5.88 -51.93 -0.31 -0.01 16 28 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 29 H 0.08 -0.17 8.14 -51.93 -0.42 -0.59 16 30 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 31 H 0.09 0.30 5.88 -51.93 -0.31 -0.01 16 32 H 0.07 0.00 8.14 -51.93 -0.42 -0.43 16 33 H 0.06 0.06 8.14 -51.93 -0.42 -0.36 16 34 H 0.41 -1.00 8.81 -40.82 -0.36 -1.36 16 35 H 0.07 -0.09 8.14 -51.93 -0.42 -0.52 16 36 H 0.10 -0.20 7.92 -51.93 -0.41 -0.61 16 37 H 0.07 -0.03 7.87 -51.93 -0.41 -0.44 16 38 H 0.07 -0.01 8.14 -51.93 -0.42 -0.44 16 39 H 0.41 -0.83 8.60 -40.82 -0.35 -1.18 16 40 H 0.18 0.31 8.06 -52.48 -0.42 -0.11 16 41 H 0.08 -0.13 7.96 -51.92 -0.41 -0.55 16 42 H 0.38 -1.87 8.74 45.56 0.40 -1.47 16 43 H -0.24 -0.43 7.11 56.52 0.40 -0.02 16 44 H -0.24 -0.64 7.11 56.52 0.40 -0.24 16 45 H 0.11 -0.39 8.10 -51.93 -0.42 -0.81 16 46 H 0.08 -0.28 8.14 -51.93 -0.42 -0.71 16 LS Contribution 387.48 15.07 5.84 5.84 Total: 0.00 -8.60 387.48 -11.54 -20.14 By element: Atomic # 1 Polarization: -5.51 SS G_CDS: -7.24 Total: -12.74 kcal Atomic # 6 Polarization: 2.81 SS G_CDS: -0.76 Total: 2.04 kcal Atomic # 7 Polarization: -1.91 SS G_CDS: -0.81 Total: -2.72 kcal Atomic # 8 Polarization: -3.80 SS G_CDS: -1.07 Total: -4.88 kcal Atomic # 14 Polarization: -0.37 SS G_CDS: -5.28 Total: -5.65 kcal Atomic # 16 Polarization: 0.18 SS G_CDS: -2.21 Total: -2.03 kcal Total LS contribution 5.84 Total: 5.84 kcal Total: -8.60 -11.54 -20.14 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_12628558_15704118.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -13.345 kcal (2) G-P(sol) polarization free energy of solvation -8.603 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -21.947 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.539 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.141 kcal (6) G-S(sol) free energy of system = (1) + (5) -33.486 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.78 seconds