Wall clock time and date at job start Mon Mar 8 2021 05:54:08 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50702 * 1 3 3 C 1.33331 * 125.95218 * 2 1 4 4 C 1.50700 * 122.70958 * 0.04700 * 3 2 1 5 5 O 1.42899 * 109.47036 * 30.02245 * 4 3 2 6 6 Si 1.86302 * 109.47135 * 150.01970 * 4 3 2 7 7 N 1.32115 * 114.58076 * 180.02562 * 3 2 1 8 8 C 1.29694 * 116.86485 * 0.02562 * 7 3 2 9 9 N 1.38609 * 124.94841 * 179.97438 * 8 7 3 10 10 C 1.46493 * 120.00201 * 180.02562 * 9 8 7 11 11 C 1.52998 * 109.47610 * 179.97438 * 10 9 8 12 12 H 1.08998 * 112.84728 * 316.19599 * 11 10 9 13 13 C 1.53780 * 113.61722 * 87.49817 * 11 10 9 14 14 C 1.53776 * 87.08325 * 139.98217 * 13 11 10 15 15 H 1.08995 * 113.69602 * 220.00522 * 14 13 11 16 16 N 1.46504 * 113.61068 * 89.11853 * 14 13 11 17 17 C 1.34773 * 119.99986 * 107.50627 * 16 14 13 18 18 O 1.21506 * 120.00098 * 359.97438 * 17 16 14 19 19 O 1.34637 * 119.99788 * 179.97438 * 17 16 14 20 20 C 1.45209 * 116.99977 * 179.97438 * 19 17 16 21 21 C 1.53001 * 109.46801 * 59.99974 * 20 19 17 22 22 C 1.52998 * 109.46995 * 179.97438 * 20 19 17 23 23 C 1.52999 * 109.47030 * 299.99899 * 20 19 17 24 24 C 1.53781 * 113.61748 * 184.99826 * 11 10 9 25 25 S 1.70958 * 110.10068 * 359.97438 * 8 7 3 26 26 H 1.08996 * 109.47363 * 179.97438 * 1 2 3 27 27 H 1.08995 * 109.46992 * 299.97427 * 1 2 3 28 28 H 1.09003 * 109.46820 * 59.96627 * 1 2 3 29 29 H 1.08998 * 109.47434 * 270.01967 * 4 3 2 30 30 H 0.96699 * 114.00388 * 60.00296 * 5 4 3 31 31 H 1.48499 * 110.00163 * 179.97438 * 6 4 3 32 32 H 1.48497 * 110.00143 * 301.32371 * 6 4 3 33 33 H 0.97000 * 120.00085 * 359.97438 * 9 8 7 34 34 H 1.09010 * 109.46920 * 299.99702 * 10 9 8 35 35 H 1.08997 * 109.47329 * 59.99647 * 10 9 8 36 36 H 1.08999 * 113.61606 * 254.53474 * 13 11 10 37 37 H 1.09008 * 113.61351 * 25.43431 * 13 11 10 38 38 H 0.97000 * 119.99935 * 287.50141 * 16 14 13 39 39 H 1.08993 * 109.47669 * 60.00174 * 21 20 19 40 40 H 1.09004 * 109.46409 * 180.02562 * 21 20 19 41 41 H 1.09001 * 109.47111 * 299.99495 * 21 20 19 42 42 H 1.09004 * 109.47000 * 60.00175 * 22 20 19 43 43 H 1.09004 * 109.46972 * 179.97438 * 22 20 19 44 44 H 1.09002 * 109.47496 * 299.99997 * 22 20 19 45 45 H 1.09004 * 109.46930 * 59.99675 * 23 20 19 46 46 H 1.08991 * 109.47150 * 180.02562 * 23 20 19 47 47 H 1.09004 * 109.47119 * 299.99919 * 23 20 19 48 48 H 1.09001 * 113.61539 * 334.56313 * 24 11 10 49 49 H 1.09002 * 113.61504 * 105.47089 * 24 11 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2898 1.0793 0.0000 4 6 1.7415 2.4830 0.0010 5 8 0.4820 2.5019 0.6760 6 14 2.9332 3.6146 0.8785 7 7 3.5850 0.8188 -0.0005 8 6 3.9315 -0.4310 -0.0015 9 7 5.2384 -0.8926 -0.0027 10 6 5.5066 -2.3328 -0.0043 11 6 7.0180 -2.5703 -0.0060 12 1 7.5479 -1.9192 -0.7012 13 6 7.6376 -2.6064 1.4010 14 6 8.5139 -3.7664 0.8998 15 1 8.6458 -4.5636 1.6313 16 7 9.7772 -3.3306 0.2995 17 6 10.9376 -3.5226 0.9576 18 8 10.9359 -4.0567 2.0489 19 8 12.0986 -3.1224 0.4057 20 6 13.3092 -3.3608 1.1713 21 6 13.4680 -4.8621 1.4199 22 6 14.5178 -2.8433 0.3887 23 6 13.2173 -2.6287 2.5117 24 6 7.4086 -4.0524 -0.1305 25 16 2.5413 -1.4260 -0.0011 26 1 -0.3634 -1.0276 -0.0005 27 1 -0.3633 0.5134 0.8902 28 1 -0.3633 0.5144 -0.8897 29 1 1.6082 2.8219 -1.0263 30 1 0.5252 2.2118 1.5974 31 1 2.4043 5.0022 0.8859 32 1 3.1481 3.1450 2.2708 33 1 5.9755 -0.2621 -0.0032 34 1 5.0684 -2.7850 0.8856 35 1 5.0674 -2.7832 -0.8944 36 1 8.2029 -1.7091 1.6523 37 1 6.9334 -2.8966 2.1809 38 1 9.7785 -2.9038 -0.5716 39 1 13.5334 -5.3837 0.4651 40 1 14.3765 -5.0409 1.9951 41 1 12.6070 -5.2312 1.9773 42 1 14.4048 -1.7738 0.2112 43 1 15.4265 -3.0219 0.9637 44 1 14.5831 -3.3652 -0.5660 45 1 12.3563 -2.9978 3.0689 46 1 14.1262 -2.8073 3.0862 47 1 13.1042 -1.5592 2.3345 48 1 6.6419 -4.7379 0.2306 49 1 7.7893 -4.3224 -1.1156 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_12628558_15704122.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 05:54:08 Heat of formation + Delta-G solvation = -38.896917 kcal Electronic energy + Delta-G solvation = -29107.090085 eV Core-core repulsion = 24970.678714 eV Total energy + Delta-G solvation = -4136.411371 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 356.160 amu Computer time = 0.89 seconds Orbital eigenvalues (eV) -41.93363 -41.04596 -40.64511 -38.25032 -37.79716 -36.57044 -35.25309 -34.02807 -32.72041 -29.91613 -28.35552 -28.31198 -28.29791 -26.99438 -25.58506 -24.67573 -24.02394 -23.29660 -21.15506 -20.96052 -20.17258 -19.32134 -19.04317 -17.94672 -17.60936 -17.37593 -17.11670 -16.89585 -16.68483 -16.24953 -16.00909 -15.70864 -15.62183 -15.40143 -15.14932 -14.98899 -14.51751 -14.23247 -14.11883 -13.94158 -13.74835 -13.66125 -13.47470 -13.42715 -13.37726 -13.08092 -12.88012 -12.85227 -12.71158 -12.47023 -12.37885 -12.28302 -12.20646 -11.85320 -11.76453 -11.60605 -11.32698 -11.01503 -11.00752 -10.57938 -10.48673 -10.25386 -9.96796 -8.61309 -4.65693 0.04717 0.19527 0.79793 1.10728 1.40413 1.81374 1.84165 1.87540 1.98115 2.13491 3.03865 3.15532 3.20810 3.34144 3.46005 3.56432 3.57520 3.75124 3.80867 3.92829 3.94680 4.16560 4.20508 4.28359 4.35391 4.42991 4.47992 4.49169 4.54490 4.60910 4.61076 4.71265 4.76035 4.76273 4.79945 4.80252 4.84090 4.90754 4.90856 4.92170 5.06738 5.08063 5.28331 5.29774 5.34118 5.44284 5.55449 5.57180 6.24299 6.34637 6.39113 6.97221 7.37601 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.059 4.059 2 C -0.243 4.243 3 C 0.069 3.931 4 C -0.042 4.042 5 O -0.526 6.526 6 Si 0.721 3.279 7 N -0.539 5.539 8 C 0.319 3.681 9 N -0.692 5.692 10 C 0.131 3.869 11 C -0.123 4.123 12 H 0.102 0.898 13 C -0.148 4.148 14 C 0.137 3.863 15 H 0.111 0.889 16 N -0.696 5.696 17 C 0.653 3.347 18 O -0.564 6.564 19 O -0.365 6.365 20 C 0.137 3.863 21 C -0.184 4.184 22 C -0.142 4.142 23 C -0.184 4.184 24 C -0.134 4.134 25 S 0.100 5.900 26 H 0.058 0.942 27 H 0.079 0.921 28 H 0.076 0.924 29 H 0.124 0.876 30 H 0.375 0.625 31 H -0.261 1.261 32 H -0.268 1.268 33 H 0.413 0.587 34 H 0.071 0.929 35 H 0.071 0.929 36 H 0.076 0.924 37 H 0.098 0.902 38 H 0.406 0.594 39 H 0.060 0.940 40 H 0.072 0.928 41 H 0.087 0.913 42 H 0.067 0.933 43 H 0.082 0.918 44 H 0.067 0.933 45 H 0.087 0.913 46 H 0.072 0.928 47 H 0.060 0.940 48 H 0.105 0.895 49 H 0.082 0.918 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.242 -2.628 -2.301 4.151 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.119 4.119 2 C -0.366 4.366 3 C -0.062 4.062 4 C -0.154 4.154 5 O -0.331 6.331 6 Si 0.622 3.378 7 N -0.266 5.266 8 C -0.052 4.052 9 N -0.334 5.334 10 C 0.007 3.993 11 C -0.142 4.142 12 H 0.120 0.880 13 C -0.186 4.186 14 C 0.033 3.967 15 H 0.129 0.871 16 N -0.354 5.354 17 C 0.406 3.594 18 O -0.452 6.452 19 O -0.279 6.279 20 C 0.101 3.899 21 C -0.241 4.241 22 C -0.199 4.199 23 C -0.241 4.241 24 C -0.173 4.173 25 S 0.349 5.651 26 H 0.077 0.923 27 H 0.097 0.903 28 H 0.094 0.906 29 H 0.141 0.859 30 H 0.223 0.777 31 H -0.186 1.186 32 H -0.193 1.193 33 H 0.251 0.749 34 H 0.090 0.910 35 H 0.089 0.911 36 H 0.095 0.905 37 H 0.116 0.884 38 H 0.242 0.758 39 H 0.079 0.921 40 H 0.091 0.909 41 H 0.106 0.894 42 H 0.086 0.914 43 H 0.101 0.899 44 H 0.086 0.914 45 H 0.106 0.894 46 H 0.091 0.909 47 H 0.079 0.921 48 H 0.123 0.877 49 H 0.101 0.899 Dipole moment (debyes) X Y Z Total from point charges 2.559 -3.043 -1.641 4.301 hybrid contribution -0.652 0.623 0.210 0.926 sum 1.907 -2.420 -1.431 3.397 Atomic orbital electron populations 1.20135 0.86473 1.01646 1.03601 1.25101 1.01280 0.92739 1.17517 1.20067 0.86867 0.97117 1.02150 1.24463 0.91890 0.95393 1.03651 1.86621 1.28660 1.89035 1.28807 0.93625 0.86149 0.76391 0.81644 1.65728 1.16992 1.16452 1.27471 1.23268 0.91824 0.91454 0.98696 1.43909 1.01741 1.07200 1.80516 1.21584 0.96096 0.79360 1.02278 1.22845 0.93996 0.98282 0.99033 0.87997 1.23594 0.98981 0.99753 0.96305 1.21758 0.80843 0.97803 0.96324 0.87109 1.44351 1.03356 1.64674 1.23044 1.18067 0.81199 0.77385 0.82715 1.90924 1.86709 1.47086 1.20488 1.86307 1.14590 1.76967 1.50077 1.22131 0.80453 0.96251 0.91102 1.22526 1.04505 0.94161 1.02954 1.21884 0.94994 1.02238 1.00816 1.22523 1.04695 1.00479 0.96442 1.23348 0.97866 0.95645 1.00406 1.83973 0.96570 1.10577 1.73977 0.92310 0.90261 0.90565 0.85856 0.77675 1.18643 1.19251 0.74851 0.91050 0.91094 0.90477 0.88379 0.75845 0.92094 0.90892 0.89434 0.91380 0.89891 0.91371 0.89428 0.90892 0.92111 0.87690 0.89886 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.06 -0.02 8.91 36.01 0.32 0.30 16 2 C -0.24 -0.43 6.50 -36.02 -0.23 -0.66 16 3 C 0.07 0.16 5.92 -84.18 -0.50 -0.34 16 4 C -0.04 -0.06 2.94 36.01 0.11 0.05 16 5 O -0.53 -0.65 10.17 -35.23 -0.36 -1.01 16 6 Si 0.72 1.00 32.08 -169.99 -5.45 -4.46 16 7 N -0.54 -1.39 8.95 -11.36 -0.10 -1.49 16 8 C 0.32 0.37 8.24 -87.68 -0.72 -0.35 16 9 N -0.69 1.05 5.71 -62.30 -0.36 0.69 16 10 C 0.13 -0.47 5.37 -4.05 -0.02 -0.49 16 11 C -0.12 0.57 3.63 -89.81 -0.33 0.24 16 12 H 0.10 -0.51 8.14 -51.93 -0.42 -0.93 16 13 C -0.15 0.47 7.43 -25.92 -0.19 0.28 16 14 C 0.14 -0.34 4.32 -67.12 -0.29 -0.63 16 15 H 0.11 -0.09 7.46 -51.93 -0.39 -0.48 16 16 N -0.70 0.93 5.27 -57.94 -0.31 0.63 16 17 C 0.65 1.27 8.06 54.05 0.44 1.70 16 18 O -0.56 -2.46 11.48 -19.28 -0.22 -2.68 16 19 O -0.36 -0.65 9.94 -40.32 -0.40 -1.05 16 20 C 0.14 0.12 1.13 -90.62 -0.10 0.02 16 21 C -0.18 -0.16 8.37 37.16 0.31 0.15 16 22 C -0.14 0.15 8.85 37.16 0.33 0.48 16 23 C -0.18 -0.18 8.37 37.16 0.31 0.14 16 24 C -0.13 0.63 7.39 -25.92 -0.19 0.44 16 25 S 0.10 0.06 22.32 -107.50 -2.40 -2.34 16 26 H 0.06 -0.02 8.14 -51.93 -0.42 -0.45 16 27 H 0.08 -0.03 6.40 -51.93 -0.33 -0.36 16 28 H 0.08 0.05 8.14 -51.93 -0.42 -0.37 16 29 H 0.12 0.07 7.96 -51.93 -0.41 -0.34 16 30 H 0.38 -0.43 8.13 45.56 0.37 -0.06 16 31 H -0.26 -0.95 7.11 56.52 0.40 -0.55 16 32 H -0.27 -1.11 7.11 56.52 0.40 -0.71 16 33 H 0.41 -0.91 8.60 -40.82 -0.35 -1.26 16 34 H 0.07 -0.25 7.85 -51.92 -0.41 -0.66 16 35 H 0.07 -0.26 8.14 -51.93 -0.42 -0.68 16 36 H 0.08 -0.15 8.14 -51.93 -0.42 -0.58 16 37 H 0.10 -0.33 7.90 -51.92 -0.41 -0.74 16 38 H 0.41 -1.33 8.81 -40.82 -0.36 -1.69 16 39 H 0.06 0.04 8.14 -51.93 -0.42 -0.39 16 40 H 0.07 -0.03 8.14 -51.93 -0.42 -0.45 16 41 H 0.09 0.26 5.88 -51.93 -0.31 -0.05 16 42 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 43 H 0.08 -0.19 8.14 -51.93 -0.42 -0.61 16 44 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 45 H 0.09 0.27 5.88 -51.93 -0.31 -0.04 16 46 H 0.07 -0.02 8.14 -51.93 -0.42 -0.45 16 47 H 0.06 0.04 8.14 -51.93 -0.42 -0.38 16 48 H 0.10 -0.57 8.10 -51.93 -0.42 -0.99 16 49 H 0.08 -0.40 8.14 -51.93 -0.42 -0.83 16 LS Contribution 404.38 15.07 6.09 6.09 Total: 0.00 -7.05 404.38 -12.28 -19.33 By element: Atomic # 1 Polarization: -7.03 SS G_CDS: -8.02 Total: -15.05 kcal Atomic # 6 Polarization: 2.09 SS G_CDS: -0.77 Total: 1.33 kcal Atomic # 7 Polarization: 0.59 SS G_CDS: -0.76 Total: -0.17 kcal Atomic # 8 Polarization: -3.76 SS G_CDS: -0.98 Total: -4.74 kcal Atomic # 14 Polarization: 1.00 SS G_CDS: -5.45 Total: -4.46 kcal Atomic # 16 Polarization: 0.06 SS G_CDS: -2.40 Total: -2.34 kcal Total LS contribution 6.09 Total: 6.09 kcal Total: -7.05 -12.28 -19.33 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_12628558_15704122.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -19.564 kcal (2) G-P(sol) polarization free energy of solvation -7.049 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -26.613 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.284 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.333 kcal (6) G-S(sol) free energy of system = (1) + (5) -38.897 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.89 seconds