Wall clock time and date at job start Mon Mar 8 2021 03:59:11 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86295 * 109.47258 * 2 1 4 4 C 1.50705 * 109.47034 * 239.99833 * 2 1 3 5 5 C 1.38605 * 120.71624 * 300.00127 * 4 2 1 6 6 N 1.32278 * 119.19131 * 179.97438 * 5 4 2 7 7 C 1.32498 * 120.74374 * 0.02562 * 6 5 4 8 8 N 1.38403 * 119.21867 * 180.02562 * 7 6 5 9 9 C 1.46500 * 119.99826 * 179.97438 * 8 7 6 10 10 H 1.08997 * 112.84847 * 336.19486 * 9 8 7 11 11 C 1.53780 * 113.61314 * 107.50293 * 9 8 7 12 12 C 1.53781 * 87.08329 * 89.11526 * 11 9 8 13 13 H 1.09001 * 113.69027 * 270.87138 * 12 11 9 14 14 C 1.50697 * 113.61690 * 139.98387 * 12 11 9 15 15 O 1.20833 * 119.99747 * 262.50435 * 14 12 11 16 16 O 1.34230 * 120.00262 * 82.22057 * 14 12 11 17 17 C 1.45202 * 116.99836 * 180.27336 * 16 14 12 18 18 C 1.50701 * 109.46859 * 180.02562 * 17 16 14 19 19 C 1.38233 * 119.99931 * 269.73182 * 18 17 16 20 20 C 1.38236 * 119.99692 * 179.76963 * 19 18 17 21 21 C 1.38235 * 120.00010 * 0.50456 * 20 19 18 22 22 C 1.38229 * 119.99928 * 359.74438 * 21 20 19 23 23 C 1.38232 * 120.00238 * 0.02562 * 22 21 20 24 24 C 1.53776 * 87.08140 * 25.42883 * 12 11 9 25 25 N 1.32499 * 121.56142 * 0.27131 * 7 6 5 26 26 C 1.32273 * 120.74141 * 359.45061 * 25 7 6 27 27 H 0.96704 * 114.00224 * 59.99918 * 1 2 3 28 28 H 1.09000 * 109.47238 * 120.00040 * 2 1 3 29 29 H 1.48499 * 110.00123 * 59.99994 * 3 2 1 30 30 H 1.48497 * 110.00132 * 181.32178 * 3 2 1 31 31 H 1.07994 * 120.40837 * 359.95501 * 5 4 2 32 32 H 0.96998 * 119.99587 * 359.97438 * 8 7 6 33 33 H 1.09001 * 113.61822 * 334.56504 * 11 9 8 34 34 H 1.08998 * 113.61725 * 203.66295 * 11 9 8 35 35 H 1.08998 * 109.47630 * 300.00638 * 17 16 14 36 36 H 1.09004 * 109.46770 * 60.01042 * 17 16 14 37 37 H 1.08005 * 120.00354 * 0.02562 * 19 18 17 38 38 H 1.07998 * 119.99808 * 180.22914 * 20 19 18 39 39 H 1.08005 * 120.00022 * 179.72834 * 21 20 19 40 40 H 1.08000 * 119.99960 * 179.97438 * 22 21 20 41 41 H 1.08001 * 120.00289 * 179.97438 * 23 22 21 42 42 H 1.09004 * 113.60893 * 89.11672 * 24 12 11 43 43 H 1.09000 * 113.62048 * 219.93433 * 24 12 11 44 44 H 1.07998 * 120.40286 * 180.25459 * 26 25 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7105 -1.2305 5 6 1.6056 -2.0372 -1.4645 6 7 2.0625 -2.6311 -2.5546 7 6 2.8232 -1.9724 -3.4165 8 7 3.2837 -2.6245 -4.5471 9 6 4.1254 -1.9124 -5.5117 10 1 3.9893 -0.8316 -5.4754 11 6 5.5991 -2.3509 -5.4849 12 6 5.2188 -3.4185 -6.5244 13 1 4.8913 -4.3607 -6.0848 14 6 6.2529 -3.6049 -7.6045 15 8 6.1209 -3.0496 -8.6696 16 8 7.3236 -4.3831 -7.3816 17 6 8.2818 -4.5121 -8.4648 18 6 9.4072 -5.4175 -8.0348 19 6 10.5270 -4.8856 -7.4234 20 6 11.5572 -5.7167 -7.0247 21 6 11.4721 -7.0784 -7.2468 22 6 10.3545 -7.6096 -7.8628 23 6 9.3222 -6.7792 -8.2573 24 6 4.0600 -2.4942 -6.9338 25 7 3.1576 -0.7055 -3.2194 26 6 2.7295 -0.0515 -2.1523 27 1 -0.3934 0.4417 -0.7651 28 1 1.7924 -0.5138 0.8900 29 1 1.5615 2.4678 1.2085 30 1 3.5346 1.7702 -0.0322 31 1 0.9865 -2.5796 -0.7653 32 1 3.0490 -3.5531 -4.7007 33 1 5.9138 -2.7662 -4.5275 34 1 6.2864 -1.5957 -5.8662 35 1 7.7877 -4.9370 -9.3385 36 1 8.6813 -3.5293 -8.7154 37 1 10.5954 -3.8212 -7.2535 38 1 12.4305 -5.3015 -6.5436 39 1 12.2789 -7.7272 -6.9392 40 1 10.2882 -8.6735 -8.0367 41 1 8.4492 -7.1942 -8.7390 42 1 4.3265 -1.7781 -7.7111 43 1 3.1324 -3.0252 -7.1475 44 1 3.0020 0.9823 -1.9991 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_12636048_12175864.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 03:59:11 Heat of formation + Delta-G solvation = 4.749100 kcal Electronic energy + Delta-G solvation = -27771.180285 eV Core-core repulsion = 23656.755215 eV Total energy + Delta-G solvation = -4114.425070 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 342.141 amu Computer time = 1.01 seconds Orbital eigenvalues (eV) -42.24679 -41.80229 -40.39207 -39.70174 -38.06541 -37.37751 -35.41236 -34.70822 -33.21304 -32.09071 -31.91679 -28.63515 -27.14027 -26.95864 -26.29825 -25.73207 -23.60792 -23.37861 -22.69160 -22.16521 -20.56071 -19.77183 -18.82663 -18.48512 -18.14806 -18.04408 -17.52060 -17.28772 -16.61593 -16.59354 -16.23519 -16.03090 -15.93412 -15.80228 -15.56737 -15.16887 -14.73265 -14.57163 -14.43158 -14.19981 -14.06486 -13.92395 -13.81727 -13.49072 -13.40011 -13.19095 -12.86554 -12.24941 -12.22210 -12.13316 -12.04901 -11.86893 -11.85987 -11.76533 -11.64932 -11.41358 -11.23029 -10.60140 -10.03963 -9.92512 -9.88001 -9.17605 -5.12813 0.02920 0.13493 0.14878 0.40044 1.16038 1.20489 1.53667 1.66927 1.74778 1.90544 2.77743 2.82662 3.06390 3.17195 3.27027 3.37037 3.52375 3.57055 3.61678 3.67202 3.69699 3.74622 3.80202 3.94440 4.04042 4.13510 4.16432 4.18398 4.33604 4.42499 4.46259 4.49305 4.54569 4.61431 4.62339 4.64667 4.77178 4.78275 4.92682 4.93618 5.01933 5.24994 5.36926 5.46444 5.51183 5.52116 5.73737 5.95705 5.96037 6.34161 6.49182 6.73823 7.25144 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.540 6.540 2 C -0.046 4.046 3 Si 0.682 3.318 4 C -0.293 4.293 5 C 0.223 3.777 6 N -0.568 5.568 7 C 0.570 3.430 8 N -0.679 5.679 9 C 0.139 3.861 10 H 0.119 0.881 11 C -0.133 4.133 12 C -0.113 4.113 13 H 0.124 0.876 14 C 0.472 3.528 15 O -0.504 6.504 16 O -0.349 6.349 17 C 0.108 3.892 18 C -0.101 4.101 19 C -0.095 4.095 20 C -0.123 4.123 21 C -0.108 4.108 22 C -0.123 4.123 23 C -0.095 4.095 24 C -0.125 4.125 25 N -0.560 5.560 26 C 0.199 3.801 27 H 0.379 0.621 28 H 0.116 0.884 29 H -0.251 1.251 30 H -0.255 1.255 31 H 0.171 0.829 32 H 0.416 0.584 33 H 0.085 0.915 34 H 0.099 0.901 35 H 0.081 0.919 36 H 0.081 0.919 37 H 0.124 0.876 38 H 0.126 0.874 39 H 0.126 0.874 40 H 0.127 0.873 41 H 0.124 0.876 42 H 0.115 0.885 43 H 0.086 0.914 44 H 0.167 0.833 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.384 0.748 -0.102 0.847 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.346 6.346 2 C -0.159 4.159 3 Si 0.584 3.416 4 C -0.301 4.301 5 C 0.055 3.945 6 N -0.289 5.289 7 C 0.213 3.787 8 N -0.315 5.315 9 C 0.033 3.967 10 H 0.137 0.863 11 C -0.172 4.172 12 C -0.132 4.132 13 H 0.142 0.858 14 C 0.314 3.686 15 O -0.392 6.392 16 O -0.266 6.266 17 C 0.035 3.965 18 C -0.101 4.101 19 C -0.113 4.113 20 C -0.141 4.141 21 C -0.126 4.126 22 C -0.141 4.141 23 C -0.113 4.113 24 C -0.164 4.164 25 N -0.282 5.282 26 C 0.031 3.969 27 H 0.227 0.773 28 H 0.133 0.867 29 H -0.175 1.175 30 H -0.180 1.180 31 H 0.188 0.812 32 H 0.254 0.746 33 H 0.104 0.896 34 H 0.118 0.882 35 H 0.099 0.901 36 H 0.099 0.901 37 H 0.142 0.858 38 H 0.144 0.856 39 H 0.144 0.856 40 H 0.145 0.855 41 H 0.142 0.858 42 H 0.133 0.867 43 H 0.105 0.895 44 H 0.184 0.816 Dipole moment (debyes) X Y Z Total from point charges 1.411 0.802 -0.442 1.683 hybrid contribution -0.101 -0.747 0.695 1.025 sum 1.310 0.055 0.252 1.335 Atomic orbital electron populations 1.86510 1.17107 1.81627 1.49320 1.24705 0.85132 1.09624 0.96411 0.94948 0.80997 0.77765 0.87934 1.21736 1.07832 0.98487 1.02017 1.22841 0.90231 0.90576 0.90814 1.67982 1.16019 1.39262 1.05632 1.19321 0.86787 0.85638 0.86906 1.43798 1.53620 1.14441 1.19651 1.21776 0.89181 0.98471 0.87306 0.86275 1.23442 0.97986 0.97123 0.98651 1.22672 0.94169 1.01296 0.95052 0.85789 1.23554 0.81356 0.75305 0.88344 1.90690 1.76230 1.45675 1.26559 1.86599 1.32294 1.63377 1.44338 1.21845 0.86901 0.99633 0.88092 1.19482 0.94804 0.93954 1.01868 1.21103 0.93282 1.00160 0.96758 1.21208 0.98936 0.93770 1.00143 1.21304 0.98018 0.95440 0.97832 1.21206 0.93895 1.00094 0.98855 1.21104 0.98756 0.92587 0.98873 1.23406 0.97289 0.98673 0.96990 1.67904 1.28060 1.08471 1.23733 1.22803 0.88488 0.98827 0.86765 0.77322 0.86673 1.17520 1.17984 0.81173 0.74629 0.89626 0.88211 0.90116 0.90109 0.85763 0.85553 0.85644 0.85546 0.85762 0.86718 0.89526 0.81635 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.61 12.79 -35.23 -0.45 0.16 16 2 C -0.05 0.07 2.85 36.01 0.10 0.18 16 3 Si 0.68 -1.56 29.87 -169.99 -5.08 -6.64 16 4 C -0.29 0.19 5.40 -104.35 -0.56 -0.38 16 5 C 0.22 0.11 10.92 -17.22 -0.19 -0.08 16 6 N -0.57 -1.18 10.46 -13.93 -0.15 -1.33 16 7 C 0.57 0.97 8.43 -322.80 -2.72 -1.75 16 8 N -0.68 0.31 5.41 -55.00 -0.30 0.01 16 9 C 0.14 -0.19 4.33 -67.12 -0.29 -0.48 16 10 H 0.12 -0.09 7.37 -51.93 -0.38 -0.47 16 11 C -0.13 0.19 7.43 -25.92 -0.19 -0.01 16 12 C -0.11 0.13 4.14 -90.96 -0.38 -0.24 16 13 H 0.12 -0.31 8.14 -51.93 -0.42 -0.73 16 14 C 0.47 0.77 7.48 36.00 0.27 1.04 16 15 O -0.50 -2.10 15.65 -18.76 -0.29 -2.39 16 16 O -0.35 -0.68 10.20 -39.26 -0.40 -1.08 16 17 C 0.11 0.12 5.59 36.01 0.20 0.32 16 18 C -0.10 -0.12 5.52 -104.62 -0.58 -0.70 16 19 C -0.09 -0.08 9.70 -39.58 -0.38 -0.46 16 20 C -0.12 -0.04 10.05 -39.58 -0.40 -0.44 16 21 C -0.11 -0.02 10.05 -39.59 -0.40 -0.42 16 22 C -0.12 -0.04 10.05 -39.59 -0.40 -0.44 16 23 C -0.10 -0.08 9.70 -39.58 -0.38 -0.46 16 24 C -0.13 0.22 7.15 -25.92 -0.19 0.03 16 25 N -0.56 -0.82 9.13 -13.93 -0.13 -0.95 16 26 C 0.20 -0.06 9.92 -17.23 -0.17 -0.23 16 27 H 0.38 -1.80 8.70 45.56 0.40 -1.40 16 28 H 0.12 -0.16 7.96 -51.93 -0.41 -0.57 16 29 H -0.25 -0.28 7.11 56.52 0.40 0.12 16 30 H -0.25 0.01 7.11 56.52 0.40 0.41 16 31 H 0.17 -0.19 8.06 -52.49 -0.42 -0.62 16 32 H 0.42 -0.66 8.82 -40.82 -0.36 -1.02 16 33 H 0.09 -0.07 8.14 -51.93 -0.42 -0.49 16 34 H 0.10 -0.15 8.09 -51.93 -0.42 -0.57 16 35 H 0.08 0.06 8.08 -51.93 -0.42 -0.36 16 36 H 0.08 0.05 8.08 -51.93 -0.42 -0.37 16 37 H 0.12 -0.08 8.06 -52.48 -0.42 -0.50 16 38 H 0.13 -0.19 8.06 -52.49 -0.42 -0.61 16 39 H 0.13 -0.21 8.06 -52.48 -0.42 -0.63 16 40 H 0.13 -0.19 8.06 -52.49 -0.42 -0.61 16 41 H 0.12 -0.08 8.06 -52.49 -0.42 -0.50 16 42 H 0.11 -0.10 7.43 -51.93 -0.39 -0.49 16 43 H 0.09 -0.20 8.14 -51.93 -0.42 -0.62 16 44 H 0.17 -0.46 5.04 -52.49 -0.26 -0.72 16 LS Contribution 378.77 15.07 5.71 5.71 Total: 0.00 -8.37 378.77 -13.41 -21.78 By element: Atomic # 1 Polarization: -5.09 SS G_CDS: -5.67 Total: -10.77 kcal Atomic # 6 Polarization: 2.15 SS G_CDS: -6.65 Total: -4.50 kcal Atomic # 7 Polarization: -1.70 SS G_CDS: -0.57 Total: -2.27 kcal Atomic # 8 Polarization: -2.17 SS G_CDS: -1.14 Total: -3.31 kcal Atomic # 14 Polarization: -1.56 SS G_CDS: -5.08 Total: -6.64 kcal Total LS contribution 5.71 Total: 5.71 kcal Total: -8.37 -13.41 -21.78 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_12636048_12175864.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 26.527 kcal (2) G-P(sol) polarization free energy of solvation -8.368 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 18.159 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.410 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.778 kcal (6) G-S(sol) free energy of system = (1) + (5) 4.749 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.01 seconds