Wall clock time and date at job start Mon Mar 8 2021 03:59:10 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86295 * 109.47258 * 2 1 4 4 C 1.50705 * 109.47034 * 239.99833 * 2 1 3 5 5 C 1.38605 * 120.71624 * 300.00127 * 4 2 1 6 6 N 1.32278 * 119.19131 * 179.97438 * 5 4 2 7 7 C 1.32498 * 120.74374 * 0.02562 * 6 5 4 8 8 N 1.38403 * 119.21867 * 180.02562 * 7 6 5 9 9 C 1.46500 * 119.99826 * 179.97438 * 8 7 6 10 10 H 1.08997 * 112.84847 * 336.19486 * 9 8 7 11 11 C 1.53780 * 113.61314 * 107.50293 * 9 8 7 12 12 C 1.53781 * 87.08329 * 89.11526 * 11 9 8 13 13 H 1.09001 * 113.69027 * 270.87138 * 12 11 9 14 14 C 1.50697 * 113.61690 * 139.98387 * 12 11 9 15 15 O 1.20833 * 119.99747 * 262.50435 * 14 12 11 16 16 O 1.34230 * 120.00262 * 82.22057 * 14 12 11 17 17 C 1.45202 * 116.99836 * 180.27336 * 16 14 12 18 18 C 1.50701 * 109.46859 * 180.02562 * 17 16 14 19 19 C 1.38233 * 119.99931 * 269.73182 * 18 17 16 20 20 C 1.38236 * 119.99692 * 179.76963 * 19 18 17 21 21 C 1.38235 * 120.00010 * 0.50456 * 20 19 18 22 22 C 1.38229 * 119.99928 * 359.74438 * 21 20 19 23 23 C 1.38232 * 120.00238 * 0.02562 * 22 21 20 24 24 C 1.53776 * 87.08140 * 25.42883 * 12 11 9 25 25 N 1.32499 * 121.56142 * 0.27131 * 7 6 5 26 26 C 1.32273 * 120.74141 * 359.45061 * 25 7 6 27 27 H 0.96704 * 114.00224 * 59.99918 * 1 2 3 28 28 H 1.09000 * 109.47238 * 120.00040 * 2 1 3 29 29 H 1.48499 * 110.00123 * 59.99994 * 3 2 1 30 30 H 1.48497 * 110.00132 * 181.32178 * 3 2 1 31 31 H 1.07994 * 120.40837 * 359.95501 * 5 4 2 32 32 H 0.96998 * 119.99587 * 359.97438 * 8 7 6 33 33 H 1.09001 * 113.61822 * 334.56504 * 11 9 8 34 34 H 1.08998 * 113.61725 * 203.66295 * 11 9 8 35 35 H 1.08998 * 109.47630 * 300.00638 * 17 16 14 36 36 H 1.09004 * 109.46770 * 60.01042 * 17 16 14 37 37 H 1.08005 * 120.00354 * 0.02562 * 19 18 17 38 38 H 1.07998 * 119.99808 * 180.22914 * 20 19 18 39 39 H 1.08005 * 120.00022 * 179.72834 * 21 20 19 40 40 H 1.08000 * 119.99960 * 179.97438 * 22 21 20 41 41 H 1.08001 * 120.00289 * 179.97438 * 23 22 21 42 42 H 1.09004 * 113.60893 * 89.11672 * 24 12 11 43 43 H 1.09000 * 113.62048 * 219.93433 * 24 12 11 44 44 H 1.07998 * 120.40286 * 180.25459 * 26 25 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7105 -1.2305 5 6 1.6056 -2.0372 -1.4645 6 7 2.0625 -2.6311 -2.5546 7 6 2.8232 -1.9724 -3.4165 8 7 3.2837 -2.6245 -4.5471 9 6 4.1254 -1.9124 -5.5117 10 1 3.9893 -0.8316 -5.4754 11 6 5.5991 -2.3509 -5.4849 12 6 5.2188 -3.4185 -6.5244 13 1 4.8913 -4.3607 -6.0848 14 6 6.2529 -3.6049 -7.6045 15 8 6.1209 -3.0496 -8.6696 16 8 7.3236 -4.3831 -7.3816 17 6 8.2818 -4.5121 -8.4648 18 6 9.4072 -5.4175 -8.0348 19 6 10.5270 -4.8856 -7.4234 20 6 11.5572 -5.7167 -7.0247 21 6 11.4721 -7.0784 -7.2468 22 6 10.3545 -7.6096 -7.8628 23 6 9.3222 -6.7792 -8.2573 24 6 4.0600 -2.4942 -6.9338 25 7 3.1576 -0.7055 -3.2194 26 6 2.7295 -0.0515 -2.1523 27 1 -0.3934 0.4417 -0.7651 28 1 1.7924 -0.5138 0.8900 29 1 1.5615 2.4678 1.2085 30 1 3.5346 1.7702 -0.0322 31 1 0.9865 -2.5796 -0.7653 32 1 3.0490 -3.5531 -4.7007 33 1 5.9138 -2.7662 -4.5275 34 1 6.2864 -1.5957 -5.8662 35 1 7.7877 -4.9370 -9.3385 36 1 8.6813 -3.5293 -8.7154 37 1 10.5954 -3.8212 -7.2535 38 1 12.4305 -5.3015 -6.5436 39 1 12.2789 -7.7272 -6.9392 40 1 10.2882 -8.6735 -8.0367 41 1 8.4492 -7.1942 -8.7390 42 1 4.3265 -1.7781 -7.7111 43 1 3.1324 -3.0252 -7.1475 44 1 3.0020 0.9823 -1.9991 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_27_12636048_12175864.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 03:59:10 Heat of formation + Delta-G solvation = 10.063764 kcal Electronic energy + Delta-G solvation = -27770.949824 eV Core-core repulsion = 23656.755215 eV Total energy + Delta-G solvation = -4114.194609 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 342.141 amu Computer time = 1.11 seconds Orbital eigenvalues (eV) -42.25378 -41.87101 -40.37637 -39.70698 -37.98041 -37.51946 -35.37251 -34.72210 -33.23543 -32.05165 -31.90288 -28.64952 -27.13319 -26.86533 -26.24727 -25.72709 -23.59818 -23.35447 -22.70467 -22.20762 -20.52688 -19.75433 -18.86604 -18.51816 -18.15594 -17.96600 -17.61475 -17.30574 -16.57103 -16.52823 -16.20260 -16.00582 -15.95148 -15.75355 -15.51907 -15.12844 -14.73240 -14.54997 -14.40551 -14.20047 -14.05309 -13.95730 -13.78966 -13.47351 -13.39804 -13.14059 -12.87689 -12.22675 -12.22027 -12.13723 -12.00008 -11.89862 -11.83010 -11.75828 -11.72710 -11.42257 -11.22805 -10.52256 -10.03610 -9.92843 -9.89454 -9.13905 -4.97447 0.04369 0.12995 0.13738 0.39744 1.03950 1.33926 1.65143 1.67769 1.75024 2.00618 2.77568 2.81781 3.12295 3.23326 3.34230 3.50628 3.55151 3.63432 3.69695 3.71858 3.73032 3.76743 3.80783 3.99913 4.07449 4.15543 4.20267 4.26331 4.30258 4.50384 4.52713 4.56849 4.63583 4.64100 4.70097 4.71752 4.84810 4.89139 4.94214 5.01330 5.04913 5.28556 5.31898 5.45738 5.50226 5.52826 5.76057 5.97965 6.02295 6.37549 6.61556 6.80242 7.25666 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.554 6.554 2 C -0.047 4.047 3 Si 0.768 3.232 4 C -0.285 4.285 5 C 0.213 3.787 6 N -0.587 5.587 7 C 0.555 3.445 8 N -0.674 5.674 9 C 0.145 3.855 10 H 0.115 0.885 11 C -0.127 4.127 12 C -0.108 4.108 13 H 0.140 0.860 14 C 0.472 3.528 15 O -0.533 6.533 16 O -0.355 6.355 17 C 0.108 3.892 18 C -0.114 4.114 19 C -0.107 4.107 20 C -0.131 4.131 21 C -0.116 4.116 22 C -0.131 4.131 23 C -0.108 4.108 24 C -0.117 4.117 25 N -0.574 5.574 26 C 0.194 3.806 27 H 0.395 0.605 28 H 0.114 0.886 29 H -0.297 1.297 30 H -0.282 1.282 31 H 0.182 0.818 32 H 0.420 0.580 33 H 0.082 0.918 34 H 0.100 0.900 35 H 0.081 0.919 36 H 0.081 0.919 37 H 0.133 0.867 38 H 0.143 0.857 39 H 0.143 0.857 40 H 0.143 0.857 41 H 0.133 0.867 42 H 0.107 0.893 43 H 0.096 0.904 44 H 0.188 0.812 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.351 0.618 0.166 0.730 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.362 6.362 2 C -0.159 4.159 3 Si 0.674 3.326 4 C -0.293 4.293 5 C 0.045 3.955 6 N -0.310 5.310 7 C 0.199 3.801 8 N -0.311 5.311 9 C 0.039 3.961 10 H 0.133 0.867 11 C -0.166 4.166 12 C -0.127 4.127 13 H 0.158 0.842 14 C 0.317 3.683 15 O -0.422 6.422 16 O -0.272 6.272 17 C 0.035 3.965 18 C -0.114 4.114 19 C -0.125 4.125 20 C -0.149 4.149 21 C -0.134 4.134 22 C -0.149 4.149 23 C -0.126 4.126 24 C -0.155 4.155 25 N -0.296 5.296 26 C 0.027 3.973 27 H 0.245 0.755 28 H 0.131 0.869 29 H -0.225 1.225 30 H -0.209 1.209 31 H 0.199 0.801 32 H 0.259 0.741 33 H 0.100 0.900 34 H 0.118 0.882 35 H 0.099 0.901 36 H 0.100 0.900 37 H 0.151 0.849 38 H 0.160 0.840 39 H 0.161 0.839 40 H 0.161 0.839 41 H 0.151 0.849 42 H 0.125 0.875 43 H 0.114 0.886 44 H 0.204 0.796 Dipole moment (debyes) X Y Z Total from point charges 1.366 0.652 -0.192 1.526 hybrid contribution -0.081 -0.701 0.665 0.970 sum 1.285 -0.049 0.473 1.370 Atomic orbital electron populations 1.86479 1.17174 1.82057 1.50503 1.24794 0.85157 1.10068 0.95856 0.93936 0.77933 0.75226 0.85536 1.21779 1.07367 0.98083 1.02095 1.23125 0.90362 0.91241 0.90729 1.67991 1.16750 1.39884 1.06332 1.19560 0.87140 0.85986 0.87434 1.43822 1.53387 1.14624 1.19222 1.21695 0.88982 0.98163 0.87256 0.86745 1.23403 0.97987 0.96965 0.98282 1.22798 0.93479 1.02182 0.94279 0.84180 1.24074 0.81359 0.74428 0.88465 1.90674 1.76830 1.46831 1.27905 1.86604 1.32525 1.63372 1.44699 1.21879 0.86892 0.99770 0.87980 1.19592 0.95025 0.94284 1.02506 1.21313 0.93439 1.00869 0.96928 1.21482 0.99346 0.94006 1.00063 1.21609 0.98499 0.95757 0.97517 1.21481 0.93783 1.00984 0.98625 1.21315 0.99438 0.92636 0.99169 1.23334 0.97410 0.98337 0.96466 1.67946 1.28625 1.08546 1.24521 1.23190 0.88118 0.99692 0.86326 0.75505 0.86909 1.22514 1.20874 0.80107 0.74092 0.89957 0.88177 0.90077 0.90046 0.84931 0.83966 0.83889 0.83939 0.84915 0.87453 0.88578 0.79579 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 1.63 12.79 -148.98 -1.90 -0.28 16 2 C -0.05 0.18 2.85 71.24 0.20 0.38 16 3 Si 0.77 -3.77 29.87 68.60 2.05 -1.72 16 4 C -0.29 0.47 5.40 -19.69 -0.11 0.36 16 5 C 0.21 0.21 10.92 84.71 0.93 1.13 16 6 N -0.59 -2.56 10.46 -197.98 -2.07 -4.63 16 7 C 0.56 1.97 8.43 261.48 2.20 4.17 16 8 N -0.67 0.59 5.41 -327.93 -1.77 -1.19 16 9 C 0.15 -0.39 4.33 45.52 0.20 -0.19 16 10 H 0.11 -0.14 7.37 -2.39 -0.02 -0.16 16 11 C -0.13 0.33 7.43 31.12 0.23 0.57 16 12 C -0.11 0.25 4.14 -11.02 -0.05 0.21 16 13 H 0.14 -0.78 8.14 -2.39 -0.02 -0.80 16 14 C 0.47 1.85 7.48 71.23 0.53 2.38 16 15 O -0.53 -4.96 15.65 21.94 0.34 -4.61 16 16 O -0.36 -1.65 10.20 -51.41 -0.52 -2.18 16 17 C 0.11 0.35 5.59 71.24 0.40 0.75 16 18 C -0.11 -0.37 5.52 -19.87 -0.11 -0.48 16 19 C -0.11 -0.22 9.70 22.27 0.22 -0.01 16 20 C -0.13 -0.07 10.05 22.27 0.22 0.15 16 21 C -0.12 0.00 10.05 22.27 0.22 0.22 16 22 C -0.13 -0.06 10.05 22.27 0.22 0.16 16 23 C -0.11 -0.22 9.70 22.27 0.22 0.00 16 24 C -0.12 0.40 7.15 31.12 0.22 0.62 16 25 N -0.57 -1.65 9.13 -197.99 -1.81 -3.45 16 26 C 0.19 -0.21 9.92 84.71 0.84 0.63 16 27 H 0.39 -4.12 8.70 -74.05 -0.64 -4.76 16 28 H 0.11 -0.35 7.96 -2.39 -0.02 -0.37 16 29 H -0.30 -0.91 7.11 99.48 0.71 -0.20 16 30 H -0.28 0.10 7.11 99.48 0.71 0.80 16 31 H 0.18 -0.42 8.06 -2.91 -0.02 -0.44 16 32 H 0.42 -1.37 8.82 -92.71 -0.82 -2.18 16 33 H 0.08 -0.13 8.14 -2.39 -0.02 -0.15 16 34 H 0.10 -0.26 8.09 -2.39 -0.02 -0.28 16 35 H 0.08 0.22 8.08 -2.39 -0.02 0.20 16 36 H 0.08 0.21 8.08 -2.38 -0.02 0.20 16 37 H 0.13 -0.09 8.06 -2.91 -0.02 -0.11 16 38 H 0.14 -0.50 8.06 -2.91 -0.02 -0.52 16 39 H 0.14 -0.61 8.06 -2.91 -0.02 -0.63 16 40 H 0.14 -0.51 8.06 -2.91 -0.02 -0.53 16 41 H 0.13 -0.09 8.06 -2.91 -0.02 -0.12 16 42 H 0.11 -0.14 7.43 -2.39 -0.02 -0.16 16 43 H 0.10 -0.49 8.14 -2.39 -0.02 -0.51 16 44 H 0.19 -1.20 5.04 -2.91 -0.01 -1.22 16 Total: 0.00 -19.46 378.77 0.53 -18.92 By element: Atomic # 1 Polarization: -11.56 SS G_CDS: -0.37 Total: -11.93 kcal Atomic # 6 Polarization: 4.47 SS G_CDS: 6.60 Total: 11.06 kcal Atomic # 7 Polarization: -3.62 SS G_CDS: -5.65 Total: -9.27 kcal Atomic # 8 Polarization: -4.98 SS G_CDS: -2.09 Total: -7.06 kcal Atomic # 14 Polarization: -3.77 SS G_CDS: 2.05 Total: -1.72 kcal Total: -19.46 0.53 -18.92 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_12636048_12175864.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 28.987 kcal (2) G-P(sol) polarization free energy of solvation -19.455 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 9.532 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.532 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.923 kcal (6) G-S(sol) free energy of system = (1) + (5) 10.064 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.11 seconds