Wall clock time and date at job start Mon Mar 8 2021 03:59:15 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42905 * 1 3 3 Si 1.86299 * 109.47224 * 2 1 4 4 C 1.50703 * 109.46667 * 119.99946 * 2 1 3 5 5 C 1.38019 * 120.33199 * 244.99413 * 4 2 1 6 6 N 1.31973 * 120.85191 * 179.72365 * 5 4 2 7 7 C 1.32394 * 121.62797 * 0.26010 * 6 5 4 8 8 N 1.39004 * 119.71023 * 180.02562 * 7 6 5 9 9 C 1.46497 * 120.00202 * 179.97438 * 8 7 6 10 10 H 1.08998 * 112.84628 * 23.80310 * 9 8 7 11 11 C 1.53779 * 113.61561 * 154.99696 * 9 8 7 12 12 C 1.53781 * 87.07813 * 89.11705 * 11 9 8 13 13 H 1.09003 * 113.61408 * 270.88476 * 12 11 9 14 14 C 1.50699 * 113.61310 * 140.06758 * 12 11 9 15 15 O 1.20823 * 120.00141 * 359.97438 * 14 12 11 16 16 O 1.34234 * 120.00166 * 179.97438 * 14 12 11 17 17 C 1.45196 * 117.00163 * 180.02562 * 16 14 12 18 18 C 1.50698 * 109.47144 * 180.02562 * 17 16 14 19 19 C 1.38237 * 119.99620 * 269.72445 * 18 17 16 20 20 C 1.38233 * 119.99852 * 179.76727 * 19 18 17 21 21 C 1.38240 * 119.99943 * 0.48290 * 20 19 18 22 22 C 1.38231 * 120.00129 * 359.79529 * 21 20 19 23 23 C 1.38232 * 120.00469 * 89.99865 * 18 17 16 24 24 C 1.53780 * 87.08462 * 25.43408 * 12 11 9 25 25 C 1.39139 * 120.58436 * 359.97438 * 7 6 5 26 26 C 1.38303 * 119.09870 * 0.02562 * 25 7 6 27 27 H 0.96693 * 114.00056 * 300.00503 * 1 2 3 28 28 H 1.08996 * 109.46947 * 239.99867 * 2 1 3 29 29 H 1.48498 * 110.00204 * 299.99870 * 3 2 1 30 30 H 1.48498 * 110.00169 * 61.31948 * 3 2 1 31 31 H 1.08002 * 119.57644 * 0.02562 * 5 4 2 32 32 H 0.97001 * 119.99585 * 359.97438 * 8 7 6 33 33 H 1.08995 * 113.61372 * 203.66547 * 11 9 8 34 34 H 1.09003 * 113.61271 * 334.48664 * 11 9 8 35 35 H 1.09010 * 109.47049 * 299.99981 * 17 16 14 36 36 H 1.08998 * 109.47308 * 59.99308 * 17 16 14 37 37 H 1.08002 * 120.00030 * 359.97438 * 19 18 17 38 38 H 1.07997 * 120.00274 * 180.25036 * 20 19 18 39 39 H 1.07998 * 119.99944 * 179.76760 * 21 20 19 40 40 H 1.07999 * 120.00296 * 179.97438 * 22 21 20 41 41 H 1.08006 * 119.99923 * 0.02562 * 23 18 17 42 42 H 1.08998 * 113.61350 * 220.01720 * 24 12 11 43 43 H 1.09000 * 113.61460 * 89.11362 * 24 12 11 44 44 H 1.08004 * 120.44965 * 180.02562 * 25 7 6 45 45 H 1.07994 * 120.74650 * 179.97438 * 26 25 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 2.6383 -0.0201 2.1941 6 7 3.0782 -0.6308 3.2782 7 6 2.8658 -1.9215 3.4825 8 7 3.3467 -2.5243 4.6391 9 6 3.1148 -3.9519 4.8719 10 1 2.9440 -4.5087 3.9506 11 6 4.1544 -4.6015 5.8004 12 6 3.2388 -4.2073 6.9714 13 1 3.4453 -3.2149 7.3722 14 6 3.1411 -5.2624 8.0429 15 8 3.7519 -6.2986 7.9280 16 8 2.3756 -5.0512 9.1252 17 6 2.3293 -6.1107 10.1169 18 6 1.4265 -5.6982 11.2508 19 6 1.9481 -5.0249 12.3397 20 6 1.1191 -4.6423 13.3776 21 6 -0.2297 -4.9418 13.3313 22 6 -0.7502 -5.6201 12.2452 23 6 0.0778 -5.9980 11.2048 24 6 2.0741 -4.2363 5.9677 25 6 2.1645 -2.6798 2.5503 26 6 1.6911 -2.0673 1.4042 27 1 -0.3933 0.4417 0.7649 28 1 1.7923 -0.5138 -0.8899 29 1 1.5616 2.4679 -1.2085 30 1 1.5880 2.4586 1.2242 31 1 2.8300 1.0345 2.0616 32 1 3.8359 -1.9995 5.2920 33 1 4.2492 -5.6787 5.6638 34 1 5.1164 -4.0890 5.8050 35 1 1.9432 -7.0211 9.6582 36 1 3.3332 -6.2943 10.4996 37 1 3.0026 -4.7949 12.3779 38 1 1.5259 -4.1128 14.2265 39 1 -0.8766 -4.6461 14.1440 40 1 -1.8039 -5.8544 12.2092 41 1 -0.3288 -6.5283 10.3563 42 1 1.3562 -3.4282 6.1085 43 1 1.6002 -5.2137 5.8768 44 1 1.9920 -3.7325 2.7194 45 1 1.1439 -2.6305 0.6629 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_12636048_13915762.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 03:59:15 Heat of formation + Delta-G solvation = -11.557735 kcal Electronic energy + Delta-G solvation = -27641.304685 eV Core-core repulsion = 23591.598408 eV Total energy + Delta-G solvation = -4049.706277 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 341.146 amu Computer time = 0.98 seconds Orbital eigenvalues (eV) -42.08283 -41.37478 -40.37233 -39.70107 -37.99029 -37.39669 -35.25834 -33.41336 -33.20986 -31.92948 -31.26473 -28.62396 -27.10706 -26.99602 -26.03331 -24.83373 -23.62109 -23.12295 -22.47420 -22.10876 -20.44273 -19.41349 -18.56815 -18.48564 -18.15627 -17.55719 -17.49578 -17.30100 -16.51134 -16.44906 -16.24391 -16.15637 -15.90302 -15.59525 -15.35130 -14.95127 -14.68575 -14.45114 -14.28500 -14.17730 -14.04689 -13.91820 -13.84236 -13.53572 -13.41744 -13.28773 -12.90447 -12.47961 -12.24223 -12.14812 -12.03586 -11.98020 -11.83371 -11.67399 -11.41665 -11.14446 -10.77723 -10.53860 -10.37878 -9.93768 -9.89393 -8.78917 -4.95479 0.13363 0.21514 0.38787 0.40051 1.12379 1.29932 1.59124 1.69804 1.90937 1.97612 2.79473 2.81177 3.09421 3.18337 3.39571 3.47784 3.49462 3.57516 3.69364 3.73156 3.76103 3.88965 3.95756 4.02433 4.03918 4.12383 4.14638 4.23216 4.30272 4.35531 4.44333 4.48023 4.51248 4.56300 4.60572 4.66646 4.71497 4.73737 4.89603 4.91463 4.99301 5.00632 5.29531 5.34468 5.44677 5.48422 5.49758 5.50880 5.93443 5.94419 6.41576 6.44991 6.70463 7.11831 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.532 6.532 2 C -0.060 4.060 3 Si 0.680 3.320 4 C -0.231 4.231 5 C 0.155 3.845 6 N -0.538 5.538 7 C 0.410 3.590 8 N -0.706 5.706 9 C 0.132 3.868 10 H 0.109 0.891 11 C -0.124 4.124 12 C -0.111 4.111 13 H 0.125 0.875 14 C 0.471 3.529 15 O -0.504 6.504 16 O -0.349 6.349 17 C 0.109 3.891 18 C -0.101 4.101 19 C -0.095 4.095 20 C -0.122 4.122 21 C -0.108 4.108 22 C -0.123 4.123 23 C -0.095 4.095 24 C -0.138 4.138 25 C -0.237 4.237 26 C -0.005 4.005 27 H 0.375 0.625 28 H 0.117 0.883 29 H -0.256 1.256 30 H -0.258 1.258 31 H 0.156 0.844 32 H 0.407 0.593 33 H 0.114 0.886 34 H 0.087 0.913 35 H 0.080 0.920 36 H 0.081 0.919 37 H 0.124 0.876 38 H 0.127 0.873 39 H 0.126 0.874 40 H 0.127 0.873 41 H 0.124 0.876 42 H 0.088 0.912 43 H 0.099 0.901 44 H 0.135 0.865 45 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.291 -0.353 1.097 1.189 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.338 6.338 2 C -0.170 4.170 3 Si 0.581 3.419 4 C -0.237 4.237 5 C -0.003 4.003 6 N -0.255 5.255 7 C 0.174 3.826 8 N -0.338 5.338 9 C 0.025 3.975 10 H 0.126 0.874 11 C -0.163 4.163 12 C -0.130 4.130 13 H 0.143 0.857 14 C 0.314 3.686 15 O -0.392 6.392 16 O -0.266 6.266 17 C 0.035 3.965 18 C -0.101 4.101 19 C -0.113 4.113 20 C -0.140 4.140 21 C -0.126 4.126 22 C -0.141 4.141 23 C -0.113 4.113 24 C -0.177 4.177 25 C -0.262 4.262 26 C -0.031 4.031 27 H 0.223 0.777 28 H 0.134 0.866 29 H -0.181 1.181 30 H -0.183 1.183 31 H 0.173 0.827 32 H 0.244 0.756 33 H 0.132 0.868 34 H 0.106 0.894 35 H 0.099 0.901 36 H 0.099 0.901 37 H 0.142 0.858 38 H 0.145 0.855 39 H 0.144 0.856 40 H 0.145 0.855 41 H 0.142 0.858 42 H 0.107 0.893 43 H 0.117 0.883 44 H 0.153 0.847 45 H 0.154 0.846 Dipole moment (debyes) X Y Z Total from point charges 0.768 0.115 1.177 1.410 hybrid contribution -1.315 -0.588 0.489 1.521 sum -0.547 -0.473 1.666 1.816 Atomic orbital electron populations 1.86597 1.17952 1.79926 1.49320 1.24761 0.83695 1.10596 0.97982 0.95103 0.91671 0.74708 0.80415 1.20940 1.06773 0.95975 0.99968 1.22275 0.91347 0.99070 0.87581 1.67142 1.25786 1.08956 1.23590 1.18346 0.89223 0.88477 0.86505 1.44141 1.60731 1.08221 1.20675 1.21799 0.96022 0.81291 0.98421 0.87363 1.23379 0.97849 1.03424 0.91605 1.22617 1.00809 0.98213 0.91332 0.85695 1.23548 0.75586 0.87816 0.81639 1.90689 1.43073 1.27870 1.77530 1.86599 1.63592 1.46256 1.30131 1.21846 0.99817 0.88780 0.86014 1.19476 0.94171 1.01531 0.94954 1.21106 1.00164 0.96616 0.93428 1.21211 0.93850 1.00171 0.98805 1.21308 0.95528 0.97531 0.98205 1.21208 1.00083 0.98741 0.94020 1.21099 0.92611 0.99000 0.98592 1.23505 0.96332 1.04034 0.93808 1.21515 1.06581 1.01435 0.96662 1.21213 0.93050 0.93419 0.95406 0.77725 0.86552 1.18063 1.18326 0.82749 0.75609 0.86803 0.89388 0.90126 0.90103 0.85759 0.85534 0.85633 0.85544 0.85779 0.89316 0.88273 0.84695 0.84600 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.53 12.84 -35.23 -0.45 -0.98 16 2 C -0.06 0.03 2.82 36.01 0.10 0.13 16 3 Si 0.68 -0.74 29.91 -169.99 -5.08 -5.83 16 4 C -0.23 -0.03 5.36 -104.46 -0.56 -0.59 16 5 C 0.15 0.12 9.84 -17.57 -0.17 -0.05 16 6 N -0.54 -1.15 10.39 -12.44 -0.13 -1.28 16 7 C 0.41 0.36 7.65 -155.02 -1.19 -0.83 16 8 N -0.71 0.87 5.43 -53.14 -0.29 0.58 16 9 C 0.13 -0.35 4.11 -67.12 -0.28 -0.63 16 10 H 0.11 -0.37 6.10 -51.93 -0.32 -0.68 16 11 C -0.12 0.29 7.15 -25.92 -0.19 0.11 16 12 C -0.11 0.19 4.13 -90.96 -0.38 -0.19 16 13 H 0.13 -0.34 8.14 -51.93 -0.42 -0.77 16 14 C 0.47 0.59 7.49 36.01 0.27 0.86 16 15 O -0.50 -1.92 15.65 -18.75 -0.29 -2.21 16 16 O -0.35 -0.57 10.20 -39.27 -0.40 -0.97 16 17 C 0.11 0.10 5.59 36.00 0.20 0.30 16 18 C -0.10 -0.10 5.52 -104.63 -0.58 -0.68 16 19 C -0.10 -0.06 9.70 -39.58 -0.38 -0.44 16 20 C -0.12 -0.02 10.05 -39.58 -0.40 -0.42 16 21 C -0.11 0.00 10.05 -39.58 -0.40 -0.40 16 22 C -0.12 -0.02 10.05 -39.58 -0.40 -0.42 16 23 C -0.09 -0.06 9.70 -39.58 -0.38 -0.44 16 24 C -0.14 0.34 7.43 -25.92 -0.19 0.14 16 25 C -0.24 0.02 9.29 -39.22 -0.36 -0.34 16 26 C -0.01 0.00 9.84 -39.32 -0.39 -0.39 16 27 H 0.38 -0.61 8.70 45.56 0.40 -0.22 16 28 H 0.12 -0.15 7.96 -51.93 -0.41 -0.56 16 29 H -0.26 -0.57 7.11 56.52 0.40 -0.17 16 30 H -0.26 -0.21 7.01 56.52 0.40 0.19 16 31 H 0.16 -0.14 4.85 -52.49 -0.25 -0.40 16 32 H 0.41 -0.69 8.82 -40.82 -0.36 -1.05 16 33 H 0.11 -0.18 7.44 -51.93 -0.39 -0.57 16 34 H 0.09 -0.24 8.14 -51.93 -0.42 -0.66 16 35 H 0.08 0.03 8.08 -51.92 -0.42 -0.39 16 36 H 0.08 0.04 8.08 -51.93 -0.42 -0.38 16 37 H 0.12 -0.10 8.06 -52.49 -0.42 -0.52 16 38 H 0.13 -0.21 8.06 -52.49 -0.42 -0.63 16 39 H 0.13 -0.22 8.06 -52.49 -0.42 -0.65 16 40 H 0.13 -0.21 8.06 -52.49 -0.42 -0.63 16 41 H 0.12 -0.11 8.06 -52.48 -0.42 -0.53 16 42 H 0.09 -0.17 8.14 -51.93 -0.42 -0.59 16 43 H 0.10 -0.27 8.10 -51.93 -0.42 -0.69 16 44 H 0.14 -0.27 6.04 -52.48 -0.32 -0.58 16 45 H 0.14 -0.15 8.06 -52.49 -0.42 -0.57 16 LS Contribution 381.23 15.07 5.75 5.75 Total: 0.00 -7.77 381.23 -12.49 -20.26 By element: Atomic # 1 Polarization: -5.11 SS G_CDS: -5.92 Total: -11.03 kcal Atomic # 6 Polarization: 1.38 SS G_CDS: -5.67 Total: -4.29 kcal Atomic # 7 Polarization: -0.28 SS G_CDS: -0.42 Total: -0.69 kcal Atomic # 8 Polarization: -3.02 SS G_CDS: -1.15 Total: -4.17 kcal Atomic # 14 Polarization: -0.74 SS G_CDS: -5.08 Total: -5.83 kcal Total LS contribution 5.75 Total: 5.75 kcal Total: -7.77 -12.49 -20.26 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_12636048_13915762.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 8.704 kcal (2) G-P(sol) polarization free energy of solvation -7.774 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 0.930 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.488 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.262 kcal (6) G-S(sol) free energy of system = (1) + (5) -11.558 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.98 seconds