Wall clock time and date at job start Mon Mar 8 2021 03:59:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42893 * 1 3 3 Si 1.86296 * 109.47389 * 2 1 4 4 C 1.50710 * 109.47184 * 119.99774 * 2 1 3 5 5 C 1.37978 * 120.32792 * 244.97995 * 4 2 1 6 6 N 1.32004 * 120.90389 * 179.76399 * 5 4 2 7 7 C 1.32344 * 121.64119 * 0.52277 * 6 5 4 8 8 N 1.39142 * 119.71451 * 179.75436 * 7 6 5 9 9 C 1.46503 * 120.00236 * 359.72269 * 8 7 6 10 10 H 1.08996 * 112.85276 * 336.20162 * 9 8 7 11 11 C 1.53783 * 113.68911 * 107.46855 * 9 8 7 12 12 C 1.53774 * 87.08417 * 89.12343 * 11 9 8 13 13 H 1.08999 * 113.69658 * 270.87676 * 12 11 9 14 14 C 1.50702 * 113.61505 * 139.97644 * 12 11 9 15 15 O 1.20826 * 120.00303 * 262.50853 * 14 12 11 16 16 O 1.34228 * 119.99603 * 82.50576 * 14 12 11 17 17 C 1.45206 * 117.00001 * 180.02562 * 16 14 12 18 18 C 1.50703 * 109.47147 * 180.02562 * 17 16 14 19 19 C 1.38237 * 119.99944 * 269.72682 * 18 17 16 20 20 C 1.38229 * 119.99729 * 179.74365 * 19 18 17 21 21 C 1.38236 * 120.00120 * 0.52952 * 20 19 18 22 22 C 1.38238 * 120.00193 * 359.74795 * 21 20 19 23 23 C 1.38232 * 119.99467 * 359.97438 * 22 21 20 24 24 C 1.53787 * 113.61513 * 205.00074 * 9 8 7 25 25 C 1.39343 * 120.56376 * 359.47586 * 7 6 5 26 26 F 1.35100 * 120.47062 * 180.27488 * 25 7 6 27 27 C 1.38441 * 119.05658 * 0.25484 * 25 7 6 28 28 H 0.96709 * 113.99946 * 300.00381 * 1 2 3 29 29 H 1.08996 * 109.47598 * 239.99574 * 2 1 3 30 30 H 1.48504 * 109.99855 * 300.00184 * 3 2 1 31 31 H 1.48503 * 110.00192 * 61.31508 * 3 2 1 32 32 H 1.08001 * 119.55037 * 0.02562 * 5 4 2 33 33 H 0.97003 * 119.99839 * 179.72925 * 8 7 6 34 34 H 1.09003 * 113.61017 * 334.57504 * 11 9 8 35 35 H 1.08995 * 113.61475 * 203.67975 * 11 9 8 36 36 H 1.09001 * 109.47157 * 299.99890 * 17 16 14 37 37 H 1.09004 * 109.47122 * 60.00023 * 17 16 14 38 38 H 1.08000 * 119.99953 * 0.02562 * 19 18 17 39 39 H 1.08004 * 120.00292 * 180.29616 * 20 19 18 40 40 H 1.08003 * 120.00023 * 179.76924 * 21 20 19 41 41 H 1.07996 * 120.00488 * 180.02562 * 22 21 20 42 42 H 1.07999 * 120.00073 * 180.02562 * 23 22 21 43 43 H 1.08996 * 113.61240 * 156.25681 * 24 9 8 44 44 H 1.09001 * 113.68699 * 25.36338 * 24 9 8 45 45 H 1.08000 * 120.75490 * 180.02562 * 27 25 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 1.2306 5 6 2.6384 -0.0202 2.1936 6 7 3.0798 -0.6301 3.2780 7 6 2.8732 -1.9214 3.4810 8 7 3.3607 -2.5247 4.6361 9 6 4.1044 -1.7321 5.6185 10 1 4.5631 -0.8432 5.1854 11 6 3.3176 -1.4523 6.9098 12 6 3.8965 -2.7686 7.4546 13 1 3.2862 -3.6427 7.2275 14 6 4.2988 -2.6966 8.9052 15 8 5.4522 -2.4948 9.2030 16 8 3.3755 -2.8565 9.8664 17 6 3.8345 -2.7741 11.2415 18 6 2.6678 -2.9772 12.1735 19 6 1.9294 -1.8906 12.6037 20 6 0.8560 -2.0776 13.4544 21 6 0.5276 -3.3499 13.8835 22 6 1.2695 -4.4360 13.4579 23 6 2.3393 -4.2496 12.6026 24 6 5.0684 -2.5653 6.4797 25 6 2.1666 -2.6808 2.5505 26 9 1.9520 -3.9978 2.7623 27 6 1.6872 -2.0665 1.4062 28 1 -0.3933 0.4418 0.7651 29 1 1.7923 -0.5139 -0.8899 30 1 1.5614 2.4678 -1.2085 31 1 1.5878 2.4586 1.2242 32 1 2.8299 1.0343 2.0604 33 1 3.2083 -3.4701 4.7910 34 1 2.2361 -1.4734 6.7754 35 1 3.6610 -0.5685 7.4475 36 1 4.5820 -3.5466 11.4220 37 1 4.2754 -1.7932 11.4192 38 1 2.1885 -0.8961 12.2716 39 1 0.2762 -1.2292 13.7868 40 1 -0.3088 -3.4956 14.5511 41 1 1.0127 -5.4301 13.7928 42 1 2.9187 -5.0980 12.2697 43 1 5.8904 -1.9859 6.8999 44 1 5.4012 -3.4853 5.9991 45 1 1.1358 -2.6288 0.6672 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_12636048_17656566.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 03:59:28 Heat of formation + Delta-G solvation = -57.012945 kcal Electronic energy + Delta-G solvation = -30243.427864 eV Core-core repulsion = 25722.296526 eV Total energy + Delta-G solvation = -4521.131338 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 359.137 amu Computer time = 1.03 seconds Orbital eigenvalues (eV) -49.90569 -42.01576 -41.40294 -40.36131 -39.67557 -38.08486 -37.37014 -35.39581 -33.26346 -33.18065 -31.91930 -31.32515 -28.59604 -27.07151 -26.94788 -26.30390 -24.93452 -23.60959 -23.07294 -22.66529 -22.15508 -20.50621 -19.69363 -18.88023 -18.46449 -18.29063 -18.10152 -17.60496 -17.51985 -17.27749 -16.98688 -16.54271 -16.25742 -16.13760 -15.93351 -15.90377 -15.50522 -15.32028 -14.85699 -14.67091 -14.43234 -14.37771 -14.12992 -14.05311 -13.89411 -13.78391 -13.51904 -13.46138 -13.33400 -12.84686 -12.69942 -12.24525 -12.13507 -12.07536 -12.01302 -11.83541 -11.65138 -11.40416 -11.21951 -10.80371 -10.67201 -10.57527 -9.92743 -9.88140 -8.85698 -5.02844 -0.10998 0.07547 0.14666 0.39848 1.16053 1.19373 1.51599 1.72086 1.83332 1.90555 2.49638 2.82472 2.99419 3.12546 3.19665 3.29476 3.31969 3.52018 3.54152 3.60675 3.74175 3.76262 3.80505 3.91925 3.95802 4.03886 4.13344 4.16237 4.33531 4.39070 4.41636 4.44156 4.49119 4.55422 4.61454 4.62453 4.66846 4.76510 4.78656 4.92517 4.93868 4.96400 5.01745 5.35915 5.37232 5.46285 5.50989 5.51911 5.88019 5.95498 6.09300 6.32973 6.73791 6.89304 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.530 6.530 2 C -0.062 4.062 3 Si 0.684 3.316 4 C -0.205 4.205 5 C 0.146 3.854 6 N -0.510 5.510 7 C 0.392 3.608 8 N -0.701 5.701 9 C 0.136 3.864 10 H 0.119 0.881 11 C -0.133 4.133 12 C -0.113 4.113 13 H 0.123 0.877 14 C 0.472 3.528 15 O -0.504 6.504 16 O -0.349 6.349 17 C 0.108 3.892 18 C -0.101 4.101 19 C -0.095 4.095 20 C -0.123 4.123 21 C -0.108 4.108 22 C -0.123 4.123 23 C -0.095 4.095 24 C -0.127 4.127 25 C -0.018 4.018 26 F -0.133 7.133 27 C -0.037 4.037 28 H 0.377 0.623 29 H 0.120 0.880 30 H -0.254 1.254 31 H -0.256 1.256 32 H 0.164 0.836 33 H 0.413 0.587 34 H 0.085 0.915 35 H 0.099 0.901 36 H 0.080 0.920 37 H 0.081 0.919 38 H 0.124 0.876 39 H 0.127 0.873 40 H 0.126 0.874 41 H 0.127 0.873 42 H 0.124 0.876 43 H 0.114 0.886 44 H 0.085 0.915 45 H 0.150 0.850 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.128 0.681 0.269 0.743 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.336 6.336 2 C -0.173 4.173 3 Si 0.585 3.415 4 C -0.211 4.211 5 C -0.011 4.011 6 N -0.226 5.226 7 C 0.154 3.846 8 N -0.333 5.333 9 C 0.030 3.970 10 H 0.137 0.863 11 C -0.172 4.172 12 C -0.132 4.132 13 H 0.141 0.859 14 C 0.314 3.686 15 O -0.391 6.391 16 O -0.266 6.266 17 C 0.035 3.965 18 C -0.101 4.101 19 C -0.113 4.113 20 C -0.141 4.141 21 C -0.126 4.126 22 C -0.140 4.140 23 C -0.113 4.113 24 C -0.165 4.165 25 C -0.044 4.044 26 F -0.112 7.112 27 C -0.063 4.063 28 H 0.224 0.776 29 H 0.138 0.862 30 H -0.178 1.178 31 H -0.181 1.181 32 H 0.181 0.819 33 H 0.251 0.749 34 H 0.104 0.896 35 H 0.117 0.883 36 H 0.099 0.901 37 H 0.099 0.901 38 H 0.142 0.858 39 H 0.145 0.855 40 H 0.144 0.856 41 H 0.145 0.855 42 H 0.142 0.858 43 H 0.132 0.868 44 H 0.104 0.896 45 H 0.168 0.832 Dipole moment (debyes) X Y Z Total from point charges 0.909 1.803 0.609 2.109 hybrid contribution -1.640 -1.453 0.307 2.212 sum -0.731 0.350 0.916 1.223 Atomic orbital electron populations 1.86619 1.17672 1.79933 1.49363 1.24836 0.83922 1.10851 0.97661 0.95061 0.91523 0.74242 0.80718 1.20880 1.05577 0.94536 1.00075 1.22412 0.91611 0.99603 0.87446 1.67306 1.24922 1.07157 1.23216 1.18383 0.90466 0.89003 0.86710 1.44223 1.59020 1.11751 1.18339 1.21755 0.92001 0.95680 0.87529 0.86346 1.23437 1.01847 0.95524 0.96415 1.22671 1.01304 1.02286 0.86960 0.85899 1.23560 0.83818 0.72511 0.88681 1.90687 1.20267 1.44431 1.83761 1.86599 1.41329 1.82341 1.16354 1.21846 0.94445 1.03308 0.76875 1.19483 0.97807 0.94101 0.98715 1.21102 0.94762 0.98507 0.96928 1.21208 0.97320 0.97560 0.97963 1.21307 0.99360 0.92765 0.99162 1.21208 0.95590 0.99323 0.97929 1.21103 0.97058 0.96257 0.96908 1.23408 0.96595 1.01973 0.94485 1.17990 1.08463 0.79567 0.98405 1.91499 1.93623 1.31177 1.94887 1.21300 0.95519 0.94439 0.95090 0.77574 0.86186 1.17841 1.18076 0.81912 0.74920 0.89643 0.88298 0.90127 0.90109 0.85762 0.85546 0.85641 0.85546 0.85772 0.86805 0.89649 0.83246 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.05 12.84 -35.23 -0.45 -0.50 16 2 C -0.06 0.10 2.82 36.01 0.10 0.20 16 3 Si 0.68 -1.55 29.91 -169.99 -5.08 -6.63 16 4 C -0.21 0.18 5.36 -104.47 -0.56 -0.38 16 5 C 0.15 -0.10 9.83 -17.57 -0.17 -0.27 16 6 N -0.51 -0.41 9.13 -12.37 -0.11 -0.53 16 7 C 0.39 0.28 7.49 -154.85 -1.16 -0.88 16 8 N -0.70 0.65 5.42 -53.05 -0.29 0.36 16 9 C 0.14 -0.20 4.35 -67.11 -0.29 -0.49 16 10 H 0.12 -0.10 7.41 -51.93 -0.38 -0.48 16 11 C -0.13 0.19 7.43 -25.92 -0.19 0.00 16 12 C -0.11 0.13 4.14 -90.96 -0.38 -0.25 16 13 H 0.12 -0.30 8.14 -51.93 -0.42 -0.72 16 14 C 0.47 0.81 7.48 36.01 0.27 1.08 16 15 O -0.50 -2.14 15.65 -18.75 -0.29 -2.44 16 16 O -0.35 -0.70 10.20 -39.25 -0.40 -1.10 16 17 C 0.11 0.13 5.59 36.01 0.20 0.33 16 18 C -0.10 -0.13 5.52 -104.62 -0.58 -0.70 16 19 C -0.09 -0.07 9.70 -39.58 -0.38 -0.46 16 20 C -0.12 -0.04 10.05 -39.59 -0.40 -0.43 16 21 C -0.11 -0.02 10.05 -39.58 -0.40 -0.42 16 22 C -0.12 -0.04 10.05 -39.58 -0.40 -0.43 16 23 C -0.10 -0.08 9.70 -39.58 -0.38 -0.46 16 24 C -0.13 0.20 7.15 -25.91 -0.19 0.02 16 25 C -0.02 -0.02 7.35 -39.10 -0.29 -0.30 16 26 F -0.13 -0.20 16.65 2.25 0.04 -0.16 16 27 C -0.04 0.00 9.82 -39.26 -0.39 -0.39 16 28 H 0.38 -1.00 8.70 45.56 0.40 -0.61 16 29 H 0.12 -0.28 7.96 -51.93 -0.41 -0.69 16 30 H -0.25 -0.31 7.11 56.52 0.40 0.09 16 31 H -0.26 0.14 7.01 56.52 0.40 0.54 16 32 H 0.16 -0.44 4.84 -52.49 -0.25 -0.69 16 33 H 0.41 -0.83 8.18 -40.82 -0.33 -1.16 16 34 H 0.08 -0.09 8.14 -51.93 -0.42 -0.51 16 35 H 0.10 -0.14 8.09 -51.93 -0.42 -0.56 16 36 H 0.08 0.06 8.08 -51.93 -0.42 -0.36 16 37 H 0.08 0.06 8.08 -51.93 -0.42 -0.36 16 38 H 0.12 -0.08 8.06 -52.49 -0.42 -0.50 16 39 H 0.13 -0.19 8.06 -52.48 -0.42 -0.61 16 40 H 0.13 -0.21 8.06 -52.48 -0.42 -0.63 16 41 H 0.13 -0.19 8.06 -52.49 -0.42 -0.61 16 42 H 0.12 -0.07 8.06 -52.49 -0.42 -0.50 16 43 H 0.11 -0.08 7.43 -51.93 -0.39 -0.47 16 44 H 0.08 -0.19 8.14 -51.93 -0.42 -0.61 16 45 H 0.15 -0.12 8.06 -52.49 -0.42 -0.55 16 LS Contribution 389.34 15.07 5.87 5.87 Total: 0.00 -7.44 389.34 -11.95 -19.39 By element: Atomic # 1 Polarization: -4.37 SS G_CDS: -5.64 Total: -10.01 kcal Atomic # 6 Polarization: 1.33 SS G_CDS: -5.58 Total: -4.25 kcal Atomic # 7 Polarization: 0.24 SS G_CDS: -0.40 Total: -0.16 kcal Atomic # 8 Polarization: -2.89 SS G_CDS: -1.15 Total: -4.03 kcal Atomic # 9 Polarization: -0.20 SS G_CDS: 0.04 Total: -0.16 kcal Atomic # 14 Polarization: -1.55 SS G_CDS: -5.08 Total: -6.63 kcal Total LS contribution 5.87 Total: 5.87 kcal Total: -7.44 -11.95 -19.39 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_12636048_17656566.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -37.625 kcal (2) G-P(sol) polarization free energy of solvation -7.441 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -45.066 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.947 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.387 kcal (6) G-S(sol) free energy of system = (1) + (5) -57.013 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.03 seconds