Wall clock time and date at job start Mon Mar 8 2021 06:48:05 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86301 * 109.47280 * 2 1 4 4 C 1.50702 * 109.47378 * 239.99761 * 2 1 3 5 5 C 1.38834 * 120.33672 * 299.99883 * 4 2 1 6 6 C 1.38334 * 118.50821 * 179.97438 * 5 4 2 7 7 C 1.39100 * 119.09457 * 0.02562 * 6 5 4 8 8 N 1.39006 * 119.70108 * 179.97438 * 7 6 5 9 9 C 1.46501 * 120.00579 * 359.97438 * 8 7 6 10 10 H 1.09007 * 109.46599 * 35.00759 * 9 8 7 11 11 C 1.52992 * 109.47431 * 155.00209 * 9 8 7 12 12 C 1.53004 * 109.47303 * 180.02562 * 11 9 8 13 13 C 1.53004 * 109.46730 * 300.00162 * 12 11 9 14 14 H 1.08998 * 109.47298 * 299.99716 * 13 12 11 15 15 O 1.42907 * 109.46839 * 179.97438 * 13 12 11 16 16 C 1.35673 * 116.99719 * 149.99860 * 15 13 12 17 17 N 1.32505 * 120.07640 * 359.97438 * 16 15 13 18 18 C 1.32240 * 119.93577 * 179.97438 * 17 16 15 19 19 C 1.38188 * 120.08395 * 0.26404 * 18 17 16 20 20 N 1.32244 * 120.14250 * 359.47052 * 19 18 17 21 21 C 1.31965 * 120.07038 * 0.52332 * 20 19 18 22 22 C 1.52991 * 109.47179 * 60.00212 * 13 12 11 23 23 C 1.52998 * 109.47416 * 275.00866 * 9 8 7 24 24 N 1.32421 * 120.59207 * 0.25095 * 7 6 5 25 25 C 1.31941 * 121.62110 * 359.48376 * 24 7 6 26 26 H 0.96705 * 113.99297 * 60.00024 * 1 2 3 27 27 H 1.09004 * 109.47072 * 119.99765 * 2 1 3 28 28 H 1.48503 * 109.99788 * 59.99566 * 3 2 1 29 29 H 1.48495 * 110.00012 * 181.31308 * 3 2 1 30 30 H 1.08009 * 120.74486 * 359.96203 * 5 4 2 31 31 H 1.07999 * 120.45558 * 179.97438 * 6 5 4 32 32 H 0.97004 * 119.99696 * 180.02562 * 8 7 6 33 33 H 1.08998 * 109.47043 * 60.00666 * 11 9 8 34 34 H 1.08998 * 109.47425 * 300.00620 * 11 9 8 35 35 H 1.09001 * 109.46936 * 180.02562 * 12 11 9 36 36 H 1.08998 * 109.46998 * 60.00061 * 12 11 9 37 37 H 1.08002 * 119.95568 * 179.97438 * 18 17 16 38 38 H 1.07993 * 119.92666 * 179.73995 * 19 18 17 39 39 H 1.07998 * 120.04771 * 179.75065 * 21 20 19 40 40 H 1.08998 * 109.47411 * 59.99573 * 22 13 12 41 41 H 1.09003 * 109.47249 * 180.02562 * 22 13 12 42 42 H 1.08998 * 109.47022 * 299.99312 * 23 9 8 43 43 H 1.09003 * 109.47336 * 59.99438 * 23 9 8 44 44 H 1.07997 * 119.57485 * 180.24353 * 25 24 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7105 -1.2304 5 6 1.6003 -2.0396 -1.4570 6 6 2.0816 -2.6545 -2.5989 7 6 2.8769 -1.9245 -3.4762 8 7 3.3678 -2.5300 -4.6271 9 6 3.0474 -3.9310 -4.9115 10 1 2.0368 -4.1499 -4.5663 11 6 3.1362 -4.1787 -6.4187 12 6 2.8009 -5.6417 -6.7157 13 6 3.7954 -6.5502 -5.9900 14 1 4.8060 -6.3317 -6.3352 15 8 3.4820 -7.9167 -6.2670 16 6 4.5144 -8.7970 -6.2699 17 7 5.7465 -8.3763 -6.0237 18 6 6.7506 -9.2368 -6.0268 19 6 6.5171 -10.5728 -6.2918 20 7 5.2880 -10.9971 -6.5328 21 6 4.2816 -10.1435 -6.5311 22 6 3.7065 -6.3025 -4.4829 23 6 4.0421 -4.8392 -4.1859 24 7 3.1751 -0.6596 -3.2219 25 6 2.7260 -0.0463 -2.1435 26 1 -0.3932 0.4417 -0.7651 27 1 1.7923 -0.5138 0.8900 28 1 1.5614 2.4679 1.2085 29 1 3.5346 1.7702 -0.0320 30 1 0.9811 -2.5814 -0.7573 31 1 1.8439 -3.6874 -2.8061 32 1 3.9231 -2.0251 -5.2417 33 1 4.1466 -3.9599 -6.7639 34 1 2.4275 -3.5317 -6.9356 35 1 2.8647 -5.8182 -7.7895 36 1 1.7904 -5.8602 -6.3705 37 1 7.7551 -8.8942 -5.8266 38 1 7.3396 -11.2726 -6.2978 39 1 3.2785 -10.4897 -6.7319 40 1 2.6960 -6.5210 -4.1377 41 1 4.4154 -6.9494 -3.9660 42 1 5.0526 -4.6203 -4.5311 43 1 3.9788 -4.6627 -3.1121 44 1 2.9865 0.9874 -1.9708 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_12806124_13915762.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:48:05 Heat of formation + Delta-G solvation = 27.143686 kcal Electronic energy + Delta-G solvation = -27191.420849 eV Core-core repulsion = 23303.911683 eV Total energy + Delta-G solvation = -3887.509165 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 329.153 amu Computer time = 0.90 seconds Orbital eigenvalues (eV) -42.36151 -41.51943 -40.50058 -38.87047 -37.76130 -35.63976 -35.08708 -33.42699 -32.23845 -32.09905 -31.42913 -29.46983 -26.42143 -25.77449 -25.17717 -24.83251 -23.88070 -23.32598 -22.23336 -21.25544 -19.60363 -18.93350 -18.61390 -18.45081 -17.81949 -17.69705 -16.99390 -16.59734 -16.50926 -16.09926 -15.90657 -15.86336 -15.64287 -15.32992 -15.21605 -14.72398 -14.37131 -14.32849 -14.20930 -14.01972 -13.81528 -13.52605 -13.46933 -13.24482 -12.84759 -12.72257 -12.42161 -12.39068 -12.28251 -12.12561 -11.96659 -11.71761 -11.46759 -11.08601 -10.72250 -10.38454 -10.37592 -10.28426 -9.77828 -8.72141 -5.03172 -0.22461 0.06180 0.24838 0.43069 1.31528 1.63142 1.68303 1.98438 2.03781 2.63381 2.86328 2.94524 3.25730 3.35434 3.40009 3.48469 3.48892 3.60509 3.75085 3.78888 3.85499 3.90705 3.97890 4.01894 4.06916 4.13355 4.15394 4.21124 4.24662 4.33532 4.42416 4.50885 4.53203 4.55191 4.68839 4.73691 4.81503 4.87941 4.91357 4.95291 5.03037 5.06338 5.17806 5.31796 5.51357 5.97268 5.99586 6.14439 6.50990 6.59467 6.68072 7.15681 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.543 6.543 2 C -0.052 4.052 3 Si 0.682 3.318 4 C -0.236 4.236 5 C -0.005 4.005 6 C -0.240 4.240 7 C 0.410 3.590 8 N -0.719 5.719 9 C 0.152 3.848 10 H 0.086 0.914 11 C -0.121 4.121 12 C -0.113 4.113 13 C 0.087 3.913 14 H 0.092 0.908 15 O -0.292 6.292 16 C 0.277 3.723 17 N -0.498 5.498 18 C 0.096 3.904 19 C 0.003 3.997 20 N -0.403 5.403 21 C 0.041 3.959 22 C -0.132 4.132 23 C -0.131 4.131 24 N -0.540 5.540 25 C 0.156 3.844 26 H 0.378 0.622 27 H 0.112 0.888 28 H -0.253 1.253 29 H -0.256 1.256 30 H 0.135 0.865 31 H 0.133 0.867 32 H 0.406 0.594 33 H 0.074 0.926 34 H 0.083 0.917 35 H 0.080 0.920 36 H 0.079 0.921 37 H 0.174 0.826 38 H 0.174 0.826 39 H 0.177 0.823 40 H 0.074 0.926 41 H 0.072 0.928 42 H 0.072 0.928 43 H 0.073 0.927 44 H 0.155 0.845 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.252 0.083 -2.554 2.568 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.348 6.348 2 C -0.164 4.164 3 Si 0.584 3.416 4 C -0.241 4.241 5 C -0.031 4.031 6 C -0.265 4.265 7 C 0.174 3.826 8 N -0.351 5.351 9 C 0.047 3.953 10 H 0.104 0.896 11 C -0.159 4.159 12 C -0.151 4.151 13 C 0.031 3.969 14 H 0.110 0.890 15 O -0.197 6.197 16 C 0.095 3.905 17 N -0.228 5.228 18 C -0.063 4.063 19 C -0.155 4.155 20 N -0.118 5.118 21 C -0.122 4.122 22 C -0.170 4.170 23 C -0.170 4.170 24 N -0.256 5.256 25 C -0.002 4.002 26 H 0.226 0.774 27 H 0.129 0.871 28 H -0.178 1.178 29 H -0.181 1.181 30 H 0.153 0.847 31 H 0.151 0.849 32 H 0.242 0.758 33 H 0.093 0.907 34 H 0.101 0.899 35 H 0.098 0.902 36 H 0.098 0.902 37 H 0.191 0.809 38 H 0.191 0.809 39 H 0.194 0.806 40 H 0.092 0.908 41 H 0.090 0.910 42 H 0.091 0.909 43 H 0.092 0.908 44 H 0.171 0.829 Dipole moment (debyes) X Y Z Total from point charges 1.001 0.612 -2.235 2.525 hybrid contribution 0.128 -0.785 0.613 1.004 sum 1.130 -0.174 -1.623 1.985 Atomic orbital electron populations 1.86490 1.17346 1.81672 1.49273 1.24780 0.85011 1.09661 0.96958 0.94852 0.81073 0.78160 0.87486 1.20992 1.06036 0.96664 1.00457 1.21186 0.93795 0.93186 0.94929 1.21492 1.05567 1.01914 0.97515 1.18374 0.89020 0.88427 0.86779 1.44557 1.56251 1.11519 1.22729 1.21077 0.99216 0.79773 0.95254 0.89565 1.21726 1.03520 0.96071 0.94610 1.21557 0.99639 0.92634 1.01261 1.22517 1.00977 0.77832 0.95604 0.88995 1.86332 1.30069 1.19130 1.84156 1.20982 0.86828 0.90145 0.92542 1.68049 0.99415 1.38778 1.16512 1.23563 0.98380 0.90467 0.93882 1.23638 0.95409 0.96051 1.00381 1.68489 0.99705 1.36024 1.07547 1.22972 1.00523 0.87104 1.01640 1.21922 1.03110 0.96764 0.95208 1.21994 1.00162 0.93388 1.01420 1.67142 1.27117 1.09196 1.22170 1.22218 0.91474 0.98525 0.87943 0.77429 0.87104 1.17817 1.18119 0.84674 0.84883 0.75825 0.90683 0.89868 0.90158 0.90201 0.80905 0.80897 0.80631 0.90775 0.90970 0.90915 0.90828 0.82870 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.12 12.78 -35.23 -0.45 -0.57 16 2 C -0.05 0.01 2.84 36.01 0.10 0.11 16 3 Si 0.68 -0.62 29.82 -169.99 -5.07 -5.69 16 4 C -0.24 -0.14 5.40 -104.46 -0.56 -0.70 16 5 C -0.01 0.00 9.76 -39.33 -0.38 -0.39 16 6 C -0.24 -0.13 8.83 -39.23 -0.35 -0.48 16 7 C 0.41 0.57 7.63 -155.01 -1.18 -0.61 16 8 N -0.72 0.50 5.25 -53.94 -0.28 0.22 16 9 C 0.15 -0.34 2.14 -67.93 -0.15 -0.49 16 10 H 0.09 -0.20 6.45 -51.93 -0.33 -0.53 16 11 C -0.12 0.38 5.39 -26.73 -0.14 0.23 16 12 C -0.11 0.27 5.57 -26.73 -0.15 0.13 16 13 C 0.09 -0.08 2.39 -26.73 -0.06 -0.14 16 14 H 0.09 -0.01 7.00 -51.93 -0.36 -0.37 16 15 O -0.29 -0.24 9.77 -18.72 -0.18 -0.42 16 16 C 0.28 0.38 7.46 -16.93 -0.13 0.25 16 17 N -0.50 -0.58 8.83 -13.13 -0.12 -0.69 16 18 C 0.10 -0.07 11.22 -17.39 -0.20 -0.27 16 19 C 0.00 0.00 11.21 -17.39 -0.20 -0.20 16 20 N -0.40 -0.73 10.49 -12.93 -0.14 -0.86 16 21 C 0.04 0.04 11.18 -17.17 -0.19 -0.15 16 22 C -0.13 0.16 5.54 -26.71 -0.15 0.01 16 23 C -0.13 0.22 5.42 -26.71 -0.14 0.08 16 24 N -0.54 -1.39 10.39 -12.44 -0.13 -1.52 16 25 C 0.16 0.18 9.84 -17.57 -0.17 0.01 16 26 H 0.38 -1.31 8.70 45.56 0.40 -0.92 16 27 H 0.11 0.03 7.96 -51.93 -0.41 -0.38 16 28 H -0.25 -0.58 7.11 56.52 0.40 -0.18 16 29 H -0.26 -0.37 7.11 56.52 0.40 0.03 16 30 H 0.14 -0.05 8.06 -52.48 -0.42 -0.47 16 31 H 0.13 -0.13 6.07 -52.49 -0.32 -0.45 16 32 H 0.41 -0.46 8.73 -40.82 -0.36 -0.81 16 33 H 0.07 -0.24 8.14 -51.93 -0.42 -0.66 16 34 H 0.08 -0.27 8.14 -51.93 -0.42 -0.70 16 35 H 0.08 -0.19 8.14 -51.93 -0.42 -0.61 16 36 H 0.08 -0.20 8.14 -51.93 -0.42 -0.63 16 37 H 0.17 -0.68 8.06 -52.49 -0.42 -1.10 16 38 H 0.17 -0.57 8.06 -52.49 -0.42 -0.99 16 39 H 0.18 -0.18 8.06 -52.49 -0.42 -0.60 16 40 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 41 H 0.07 0.01 8.14 -51.93 -0.42 -0.41 16 42 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 43 H 0.07 -0.06 7.66 -51.93 -0.40 -0.46 16 44 H 0.15 -0.13 4.88 -52.49 -0.26 -0.38 16 LS Contribution 360.04 15.07 5.43 5.43 Total: 0.00 -7.49 360.04 -10.88 -18.38 By element: Atomic # 1 Polarization: -5.77 SS G_CDS: -5.89 Total: -11.66 kcal Atomic # 6 Polarization: 1.45 SS G_CDS: -4.05 Total: -2.60 kcal Atomic # 7 Polarization: -2.19 SS G_CDS: -0.66 Total: -2.85 kcal Atomic # 8 Polarization: -0.36 SS G_CDS: -0.63 Total: -0.99 kcal Atomic # 14 Polarization: -0.62 SS G_CDS: -5.07 Total: -5.69 kcal Total LS contribution 5.43 Total: 5.43 kcal Total: -7.49 -10.88 -18.38 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_12806124_13915762.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 45.520 kcal (2) G-P(sol) polarization free energy of solvation -7.492 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 38.028 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.884 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.376 kcal (6) G-S(sol) free energy of system = (1) + (5) 27.144 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.90 seconds