Wall clock time and date at job start Mon Mar 8 2021 06:48:17 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86299 * 109.47230 * 2 1 4 4 C 1.50701 * 109.47228 * 120.00279 * 2 1 3 5 5 C 1.37979 * 120.32707 * 244.99537 * 4 2 1 6 6 N 1.32004 * 120.90372 * 179.97438 * 5 4 2 7 7 C 1.32339 * 121.64544 * 0.02562 * 6 5 4 8 8 N 1.39145 * 119.71919 * 179.97438 * 7 6 5 9 9 C 1.46502 * 119.99890 * 359.97438 * 8 7 6 10 10 H 1.08999 * 109.47171 * 35.00358 * 9 8 7 11 11 C 1.52998 * 109.47085 * 155.00398 * 9 8 7 12 12 C 1.52995 * 109.47388 * 179.97438 * 11 9 8 13 13 C 1.53002 * 109.47378 * 300.00098 * 12 11 9 14 14 H 1.08999 * 109.46877 * 299.99856 * 13 12 11 15 15 O 1.42899 * 109.47598 * 179.97438 * 13 12 11 16 16 C 1.35675 * 117.00113 * 149.99614 * 15 13 12 17 17 C 1.39071 * 120.07188 * 180.02562 * 16 15 13 18 18 N 1.31997 * 119.91912 * 180.28028 * 17 16 15 19 19 C 1.32208 * 120.06618 * 359.48879 * 18 17 16 20 20 C 1.38233 * 120.14266 * 0.51113 * 19 18 17 21 21 N 1.32213 * 120.07897 * 359.74919 * 20 19 18 22 22 C 1.52998 * 109.46941 * 59.99628 * 13 12 11 23 23 C 1.53000 * 109.46990 * 275.00335 * 9 8 7 24 24 C 1.39339 * 120.56396 * 0.25052 * 7 6 5 25 25 F 1.35101 * 120.47408 * 179.72267 * 24 7 6 26 26 C 1.38447 * 119.05882 * 359.49741 * 24 7 6 27 27 H 0.96698 * 113.99727 * 299.99627 * 1 2 3 28 28 H 1.08999 * 109.47118 * 240.00199 * 2 1 3 29 29 H 1.48496 * 110.00204 * 299.99985 * 3 2 1 30 30 H 1.48494 * 109.99847 * 61.32460 * 3 2 1 31 31 H 1.08003 * 119.55226 * 0.02562 * 5 4 2 32 32 H 0.97005 * 120.00120 * 179.97438 * 8 7 6 33 33 H 1.08999 * 109.47149 * 59.99946 * 11 9 8 34 34 H 1.09002 * 109.47434 * 300.00216 * 11 9 8 35 35 H 1.09001 * 109.47322 * 179.97438 * 12 11 9 36 36 H 1.08999 * 109.46999 * 59.99880 * 12 11 9 37 37 H 1.08002 * 120.03672 * 359.97438 * 17 16 15 38 38 H 1.08004 * 119.93313 * 180.23471 * 19 18 17 39 39 H 1.07997 * 119.96540 * 179.72078 * 20 19 18 40 40 H 1.08999 * 109.47149 * 60.00394 * 22 13 12 41 41 H 1.09002 * 109.47434 * 180.02562 * 22 13 12 42 42 H 1.09001 * 109.47560 * 299.99641 * 23 9 8 43 43 H 1.09001 * 109.47214 * 60.00151 * 23 9 8 44 44 H 1.07997 * 120.76674 * 180.24226 * 26 24 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7105 1.2304 5 6 2.6382 -0.0203 2.1937 6 7 3.0831 -0.6311 3.2760 7 6 2.8722 -1.9213 3.4814 8 7 3.3598 -2.5247 4.6365 9 6 4.1036 -1.7322 5.6188 10 1 3.6907 -0.7244 5.6603 11 6 3.9877 -2.3880 6.9963 12 6 4.7650 -1.5608 8.0221 13 6 6.2375 -1.4927 7.6120 14 1 6.6500 -2.5007 7.5704 15 8 6.9634 -0.7195 8.5698 16 6 8.2690 -1.0380 8.7563 17 6 9.0356 -0.3272 9.6734 18 7 10.3069 -0.6360 9.8485 19 6 10.8489 -1.6262 9.1603 20 6 10.0894 -2.3346 8.2480 21 7 8.8168 -2.0268 8.0644 22 6 6.3534 -0.8369 6.2346 23 6 5.5761 -1.6636 5.2090 24 6 2.1709 -2.6820 2.5481 25 9 1.9614 -4.0002 2.7569 26 6 1.6877 -2.0667 1.4058 27 1 -0.3933 0.4417 0.7651 28 1 1.7923 -0.5138 -0.8900 29 1 1.5616 2.4679 -1.2084 30 1 1.5881 2.4584 1.2243 31 1 2.8295 1.0343 2.0607 32 1 3.2072 -3.4701 4.7914 33 1 4.4006 -3.3959 6.9548 34 1 2.9386 -2.4370 7.2883 35 1 4.6820 -2.0277 9.0035 36 1 4.3524 -0.5527 8.0636 37 1 8.5924 0.4797 10.2382 38 1 11.8883 -1.8795 9.3080 39 1 10.5362 -3.1400 7.6841 40 1 5.9409 0.1712 6.2762 41 1 7.4024 -0.7887 5.9422 42 1 5.9892 -2.6715 5.1675 43 1 5.6587 -1.1964 4.2276 44 1 1.1371 -2.6291 0.6662 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_12806124_17656566.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:48:17 Heat of formation + Delta-G solvation = -17.303486 kcal Electronic energy + Delta-G solvation = -29770.472740 eV Core-core repulsion = 25411.582225 eV Total energy + Delta-G solvation = -4358.890515 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 347.143 amu Computer time = 0.96 seconds Orbital eigenvalues (eV) -49.87555 -42.31683 -41.50108 -40.46602 -38.85079 -37.91549 -35.73480 -35.05581 -33.28333 -32.26475 -32.01215 -31.45754 -29.44017 -26.57101 -25.89432 -25.26086 -24.74024 -23.91808 -23.14909 -22.56603 -21.24211 -19.59639 -19.33290 -18.75890 -18.52865 -18.34516 -17.78099 -17.64960 -17.01935 -16.91646 -16.72013 -16.21521 -15.99481 -15.96101 -15.70461 -15.49018 -15.33171 -15.19368 -14.51951 -14.46690 -14.34416 -14.24399 -13.94778 -13.75915 -13.49453 -13.41014 -13.21211 -12.83747 -12.73148 -12.62508 -12.33830 -12.29006 -12.05168 -12.03591 -11.70904 -11.38429 -11.12114 -10.79551 -10.62806 -10.54996 -10.24611 -9.73413 -8.79643 -5.02522 -0.18843 -0.07837 0.09913 0.11090 1.20148 1.52041 1.71766 1.90757 1.96263 2.53832 2.67064 2.98212 3.03256 3.23215 3.29195 3.33231 3.44641 3.49719 3.54388 3.56309 3.81695 3.88104 3.92791 4.00695 4.02690 4.06093 4.21731 4.23950 4.29731 4.33446 4.41138 4.43559 4.46739 4.61143 4.64258 4.70680 4.80120 4.87413 4.96110 4.96649 5.04603 5.05442 5.16424 5.24940 5.40151 5.92581 6.04518 6.14965 6.18207 6.33929 6.71734 6.93912 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.530 6.530 2 C -0.062 4.062 3 Si 0.683 3.317 4 C -0.208 4.208 5 C 0.146 3.854 6 N -0.511 5.511 7 C 0.392 3.608 8 N -0.714 5.714 9 C 0.155 3.845 10 H 0.096 0.904 11 C -0.124 4.124 12 C -0.112 4.112 13 C 0.087 3.913 14 H 0.091 0.909 15 O -0.292 6.292 16 C 0.278 3.722 17 C 0.040 3.960 18 N -0.403 5.403 19 C 0.003 3.997 20 C 0.096 3.904 21 N -0.498 5.498 22 C -0.130 4.130 23 C -0.123 4.123 24 C -0.021 4.021 25 F -0.134 7.134 26 C -0.037 4.037 27 H 0.376 0.624 28 H 0.120 0.880 29 H -0.254 1.254 30 H -0.256 1.256 31 H 0.163 0.837 32 H 0.412 0.588 33 H 0.072 0.928 34 H 0.080 0.920 35 H 0.078 0.922 36 H 0.079 0.921 37 H 0.176 0.824 38 H 0.174 0.826 39 H 0.174 0.826 40 H 0.075 0.925 41 H 0.070 0.930 42 H 0.065 0.935 43 H 0.076 0.924 44 H 0.149 0.851 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.107 -0.589 -0.040 2.188 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.336 6.336 2 C -0.172 4.172 3 Si 0.584 3.416 4 C -0.213 4.213 5 C -0.011 4.011 6 N -0.228 5.228 7 C 0.154 3.846 8 N -0.346 5.346 9 C 0.050 3.950 10 H 0.114 0.886 11 C -0.162 4.162 12 C -0.150 4.150 13 C 0.031 3.969 14 H 0.109 0.891 15 O -0.197 6.197 16 C 0.096 3.904 17 C -0.123 4.123 18 N -0.118 5.118 19 C -0.156 4.156 20 C -0.063 4.063 21 N -0.227 5.227 22 C -0.168 4.168 23 C -0.162 4.162 24 C -0.047 4.047 25 F -0.113 7.113 26 C -0.064 4.064 27 H 0.224 0.776 28 H 0.138 0.862 29 H -0.178 1.178 30 H -0.181 1.181 31 H 0.180 0.820 32 H 0.249 0.751 33 H 0.091 0.909 34 H 0.098 0.902 35 H 0.097 0.903 36 H 0.098 0.902 37 H 0.193 0.807 38 H 0.191 0.809 39 H 0.191 0.809 40 H 0.093 0.907 41 H 0.089 0.911 42 H 0.084 0.916 43 H 0.095 0.905 44 H 0.167 0.833 Dipole moment (debyes) X Y Z Total from point charges 2.341 0.675 0.288 2.454 hybrid contribution -1.546 -1.577 -0.217 2.219 sum 0.795 -0.902 0.072 1.205 Atomic orbital electron populations 1.86617 1.17702 1.79940 1.49346 1.24824 0.83897 1.10808 0.97679 0.95068 0.91553 0.74293 0.80698 1.20854 1.05805 0.94559 1.00117 1.22402 0.91568 0.99535 0.87582 1.67324 1.25014 1.07235 1.23206 1.18431 0.90280 0.88951 0.86941 1.44652 1.58974 1.12104 1.18830 1.21032 0.91363 0.96280 0.86324 0.88633 1.21765 1.01355 0.99671 0.93435 1.21532 0.92168 1.02003 0.99276 1.22526 0.91264 0.96024 0.87084 0.89112 1.86329 1.17336 1.57174 1.58852 1.20975 0.86382 0.91055 0.92003 1.22958 0.89693 1.01437 0.98233 1.68484 1.09872 1.12943 1.20477 1.23637 1.02345 0.94038 0.95534 1.23568 0.88520 0.98586 0.95609 1.68055 1.13746 1.15671 1.25259 1.21884 1.01331 1.00182 0.93399 1.21859 0.94309 1.00693 0.99336 1.18010 1.08795 0.79472 0.98447 1.91493 1.93732 1.31086 1.94948 1.21291 0.95491 0.94434 0.95135 0.77595 0.86250 1.17845 1.18088 0.82026 0.75119 0.90934 0.90153 0.90329 0.90193 0.80654 0.80925 0.80923 0.90653 0.91116 0.91592 0.90524 0.83343 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.19 12.84 -35.23 -0.45 -0.65 16 2 C -0.06 0.08 2.82 36.01 0.10 0.18 16 3 Si 0.68 -1.35 29.91 -169.99 -5.08 -6.43 16 4 C -0.21 0.11 5.36 -104.47 -0.56 -0.45 16 5 C 0.15 -0.04 9.83 -17.57 -0.17 -0.22 16 6 N -0.51 -0.60 9.20 -12.37 -0.11 -0.71 16 7 C 0.39 0.44 7.47 -154.86 -1.16 -0.72 16 8 N -0.71 0.34 5.22 -53.85 -0.28 0.06 16 9 C 0.15 -0.18 2.47 -67.93 -0.17 -0.35 16 10 H 0.10 0.00 7.54 -51.93 -0.39 -0.39 16 11 C -0.12 0.29 5.39 -26.73 -0.14 0.15 16 12 C -0.11 0.18 5.57 -26.73 -0.15 0.04 16 13 C 0.09 -0.02 2.39 -26.73 -0.06 -0.09 16 14 H 0.09 0.04 7.00 -51.93 -0.36 -0.32 16 15 O -0.29 -0.38 9.77 -18.73 -0.18 -0.56 16 16 C 0.28 0.47 7.46 -16.94 -0.13 0.35 16 17 C 0.04 0.05 11.18 -17.17 -0.19 -0.14 16 18 N -0.40 -0.80 10.49 -12.93 -0.14 -0.93 16 19 C 0.00 0.00 11.21 -17.39 -0.20 -0.20 16 20 C 0.10 -0.06 11.22 -17.39 -0.20 -0.25 16 21 N -0.50 -0.70 8.83 -13.13 -0.12 -0.82 16 22 C -0.13 0.05 5.54 -26.75 -0.15 -0.10 16 23 C -0.12 0.10 5.51 -26.75 -0.15 -0.05 16 24 C -0.02 -0.03 7.35 -39.09 -0.29 -0.32 16 25 F -0.13 -0.26 16.65 2.25 0.04 -0.22 16 26 C -0.04 -0.01 9.82 -39.25 -0.39 -0.40 16 27 H 0.38 -0.90 8.70 45.56 0.40 -0.50 16 28 H 0.12 -0.24 7.96 -51.93 -0.41 -0.65 16 29 H -0.25 -0.37 7.11 56.52 0.40 0.03 16 30 H -0.26 0.07 7.01 56.52 0.40 0.46 16 31 H 0.16 -0.37 4.84 -52.48 -0.25 -0.62 16 32 H 0.41 -0.61 8.07 -40.82 -0.33 -0.94 16 33 H 0.07 -0.20 8.14 -51.93 -0.42 -0.62 16 34 H 0.08 -0.20 8.14 -51.93 -0.42 -0.63 16 35 H 0.08 -0.13 8.14 -51.93 -0.42 -0.56 16 36 H 0.08 -0.12 8.14 -51.93 -0.42 -0.55 16 37 H 0.18 -0.13 8.06 -52.49 -0.42 -0.55 16 38 H 0.17 -0.55 8.06 -52.48 -0.42 -0.97 16 39 H 0.17 -0.66 8.06 -52.49 -0.42 -1.08 16 40 H 0.07 -0.02 8.14 -51.93 -0.42 -0.44 16 41 H 0.07 0.05 8.14 -51.93 -0.42 -0.37 16 42 H 0.07 -0.04 8.14 -51.93 -0.42 -0.46 16 43 H 0.08 0.03 8.14 -51.93 -0.42 -0.39 16 44 H 0.15 -0.06 8.06 -52.49 -0.42 -0.49 16 LS Contribution 369.11 15.07 5.56 5.56 Total: 0.00 -6.93 369.11 -10.39 -17.32 By element: Atomic # 1 Polarization: -4.41 SS G_CDS: -5.63 Total: -10.05 kcal Atomic # 6 Polarization: 1.43 SS G_CDS: -3.99 Total: -2.56 kcal Atomic # 7 Polarization: -1.76 SS G_CDS: -0.65 Total: -2.41 kcal Atomic # 8 Polarization: -0.57 SS G_CDS: -0.64 Total: -1.21 kcal Atomic # 9 Polarization: -0.26 SS G_CDS: 0.04 Total: -0.22 kcal Atomic # 14 Polarization: -1.35 SS G_CDS: -5.08 Total: -6.43 kcal Total LS contribution 5.56 Total: 5.56 kcal Total: -6.93 -10.39 -17.32 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_12806124_17656566.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 0.014 kcal (2) G-P(sol) polarization free energy of solvation -6.930 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -6.916 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.388 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.317 kcal (6) G-S(sol) free energy of system = (1) + (5) -17.303 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.96 seconds