Wall clock time and date at job start Mon Mar 8 2021 05:45:12 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53003 * 1 3 3 C 1.53000 * 109.47479 * 2 1 4 4 C 1.53004 * 109.46753 * 240.00181 * 2 1 3 5 5 O 1.45200 * 109.46974 * 120.00584 * 2 1 3 6 6 C 1.34636 * 117.00199 * 59.99557 * 5 2 1 7 7 O 1.21504 * 119.99926 * 0.02562 * 6 5 2 8 8 N 1.34778 * 119.99858 * 180.02562 * 6 5 2 9 9 C 1.46496 * 120.00072 * 179.97438 * 8 6 5 10 10 H 1.09002 * 109.47021 * 34.99856 * 9 8 6 11 11 C 1.53005 * 109.47414 * 154.99744 * 9 8 6 12 12 C 1.52997 * 109.47452 * 180.02562 * 11 9 8 13 13 C 1.53002 * 109.46817 * 300.00239 * 12 11 9 14 14 H 1.09004 * 109.46733 * 179.97438 * 13 12 11 15 15 N 1.46496 * 109.47037 * 299.99555 * 13 12 11 16 16 C 1.38403 * 120.00079 * 275.00080 * 15 13 12 17 17 N 1.32482 * 119.22009 * 359.73330 * 16 15 13 18 18 C 1.32276 * 120.74449 * 179.71325 * 17 16 15 19 19 C 1.38609 * 119.19555 * 0.55227 * 18 17 16 20 20 C 1.50691 * 120.72331 * 179.75204 * 19 18 17 21 21 O 1.42908 * 109.47125 * 244.97314 * 20 19 18 22 22 Si 1.86299 * 109.47232 * 4.97095 * 20 19 18 23 23 C 1.38612 * 118.55613 * 359.72056 * 19 18 17 24 24 N 1.32275 * 119.19296 * 0.02562 * 23 19 18 25 25 C 1.53000 * 109.47233 * 60.00194 * 13 12 11 26 26 C 1.52997 * 109.47060 * 299.99657 * 25 13 12 27 27 H 1.08995 * 109.46714 * 300.00028 * 1 2 3 28 28 H 1.09000 * 109.46608 * 59.99251 * 1 2 3 29 29 H 1.08997 * 109.47259 * 179.97438 * 1 2 3 30 30 H 1.09000 * 109.47289 * 180.02562 * 3 2 1 31 31 H 1.08993 * 109.47241 * 300.00324 * 3 2 1 32 32 H 1.09007 * 109.46883 * 60.00073 * 3 2 1 33 33 H 1.09000 * 109.46939 * 299.99571 * 4 2 1 34 34 H 1.08991 * 109.47340 * 60.00695 * 4 2 1 35 35 H 1.09000 * 109.46898 * 180.02562 * 4 2 1 36 36 H 0.97007 * 120.00235 * 359.97438 * 8 6 5 37 37 H 1.09002 * 109.46935 * 60.00059 * 11 9 8 38 38 H 1.09001 * 109.46812 * 300.00401 * 11 9 8 39 39 H 1.08993 * 109.47194 * 179.97438 * 12 11 9 40 40 H 1.09002 * 109.46695 * 59.99734 * 12 11 9 41 41 H 0.97001 * 119.99395 * 95.00922 * 15 13 12 42 42 H 1.08003 * 120.40661 * 180.29451 * 18 17 16 43 43 H 1.09001 * 109.47643 * 124.97410 * 20 19 18 44 44 H 0.96691 * 113.99770 * 59.99599 * 21 20 19 45 45 H 1.48501 * 110.00215 * 180.02562 * 22 20 19 46 46 H 1.48503 * 110.00247 * 301.32097 * 22 20 19 47 47 H 1.07991 * 120.40061 * 180.02562 * 23 19 18 48 48 H 1.09002 * 109.47398 * 59.99826 * 25 13 12 49 49 H 1.09001 * 109.47194 * 180.02562 * 25 13 12 50 50 H 1.08996 * 109.47853 * 180.02562 * 26 25 13 51 51 H 1.09002 * 109.47153 * 300.00319 * 26 25 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0401 1.4425 0.0000 4 6 2.0399 -0.7212 -1.2493 5 8 2.0140 -0.6846 1.1855 6 6 1.6522 -1.9724 1.3382 7 8 0.9515 -2.5097 0.5035 8 7 2.0671 -2.6656 2.4170 9 6 1.6730 -4.0666 2.5835 10 1 1.6264 -4.5494 1.6074 11 6 2.7014 -4.7852 3.4593 12 6 2.2901 -6.2486 3.6327 13 6 0.9153 -6.3162 4.3006 14 1 0.6221 -7.3589 4.4237 15 7 0.9775 -5.6678 5.6128 16 6 1.4028 -6.3830 6.7187 17 7 1.7450 -7.6547 6.5741 18 6 2.1611 -8.3650 7.6094 19 6 2.2256 -7.7663 8.8579 20 6 2.6893 -8.5449 10.0620 21 8 1.6116 -8.6704 10.9920 22 14 3.2492 -10.2396 9.5278 23 6 1.8549 -6.4358 8.9748 24 7 1.4527 -5.7812 7.8980 25 6 -0.1131 -5.5978 3.4248 26 6 0.2981 -4.1344 3.2514 27 1 -0.3632 0.5138 0.8900 28 1 -0.3632 0.5140 -0.8899 29 1 -0.3633 -1.0276 -0.0005 30 1 3.1301 1.4424 -0.0005 31 1 1.6768 1.9563 -0.8899 32 1 1.6768 1.9563 0.8901 33 1 1.6766 -1.7489 -1.2493 34 1 1.6767 -0.2074 -2.1392 35 1 3.1299 -0.7217 -1.2491 36 1 2.6268 -2.2367 3.0833 37 1 2.7480 -4.3024 4.4355 38 1 3.6808 -4.7373 2.9832 39 1 3.0230 -6.7606 4.2562 40 1 2.2439 -6.7311 2.6564 41 1 0.7204 -4.7372 5.7065 42 1 2.4432 -9.4000 7.4844 43 1 3.5191 -8.0208 10.5361 44 1 0.8372 -9.1280 10.6372 45 1 3.7084 -11.0177 10.7063 46 1 2.1358 -10.9526 8.8515 47 1 1.8941 -5.9398 9.9332 48 1 -0.1594 -6.0803 2.4485 49 1 -1.0925 -5.6456 3.9009 50 1 -0.4347 -3.6223 2.6279 51 1 0.3444 -3.6518 4.2277 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_12867096_12175864.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 05:45:12 Heat of formation + Delta-G solvation = -56.632775 kcal Electronic energy + Delta-G solvation = -31743.211507 eV Core-core repulsion = 27451.452894 eV Total energy + Delta-G solvation = -4291.758613 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 351.199 amu Computer time = 1.06 seconds Orbital eigenvalues (eV) -42.16212 -41.75171 -40.39029 -38.38804 -37.94148 -36.23879 -35.12252 -34.70086 -34.18085 -32.14308 -31.92529 -29.70740 -28.31566 -28.27659 -26.58845 -25.83911 -24.38207 -23.84177 -23.30979 -22.42071 -21.19992 -20.55734 -19.56793 -19.10032 -18.40848 -18.07472 -17.72591 -17.03448 -16.91043 -16.64519 -16.36464 -16.20050 -15.97884 -15.75394 -15.48809 -15.38923 -15.19865 -14.89234 -14.59767 -14.47978 -14.13817 -14.00589 -13.88234 -13.43346 -13.39345 -13.24257 -13.13166 -13.04940 -12.82057 -12.81161 -12.45104 -12.39685 -12.27825 -12.23169 -12.08874 -11.86213 -11.83059 -11.72811 -11.44259 -11.27167 -11.21743 -10.91491 -10.71520 -10.15219 -10.00631 -9.10238 -5.04187 0.07903 0.17567 1.20796 1.21576 1.50398 1.81911 1.90337 1.92590 2.83262 3.10913 3.16348 3.31698 3.50225 3.60700 3.61775 3.71626 3.76778 3.79343 3.82043 3.84534 3.90282 3.98623 4.04826 4.19235 4.26610 4.30786 4.36927 4.49288 4.53831 4.57171 4.64018 4.64083 4.70120 4.78105 4.79221 4.85661 4.89057 4.94296 4.95189 4.97959 5.02068 5.07734 5.10814 5.20559 5.28473 5.32236 5.37526 5.48971 5.63284 5.80091 6.02736 6.33363 6.41630 6.45094 7.31031 7.46020 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.184 4.184 2 C 0.137 3.863 3 C -0.142 4.142 4 C -0.184 4.184 5 O -0.366 6.366 6 C 0.650 3.350 7 O -0.566 6.566 8 N -0.709 5.709 9 C 0.163 3.837 10 H 0.095 0.905 11 C -0.126 4.126 12 C -0.125 4.125 13 C 0.158 3.842 14 H 0.097 0.903 15 N -0.688 5.688 16 C 0.568 3.432 17 N -0.561 5.561 18 C 0.198 3.802 19 C -0.294 4.294 20 C -0.053 4.053 21 O -0.530 6.530 22 Si 0.679 3.321 23 C 0.224 3.776 24 N -0.571 5.571 25 C -0.125 4.125 26 C -0.133 4.133 27 H 0.059 0.941 28 H 0.071 0.929 29 H 0.087 0.913 30 H 0.067 0.933 31 H 0.082 0.918 32 H 0.067 0.933 33 H 0.087 0.913 34 H 0.071 0.929 35 H 0.059 0.941 36 H 0.405 0.595 37 H 0.070 0.930 38 H 0.073 0.927 39 H 0.077 0.923 40 H 0.079 0.921 41 H 0.412 0.588 42 H 0.166 0.834 43 H 0.120 0.880 44 H 0.376 0.624 45 H -0.254 1.254 46 H -0.258 1.258 47 H 0.169 0.831 48 H 0.087 0.913 49 H 0.075 0.925 50 H 0.075 0.925 51 H 0.063 0.937 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.393 -0.088 -0.734 2.504 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.241 4.241 2 C 0.100 3.900 3 C -0.199 4.199 4 C -0.241 4.241 5 O -0.281 6.281 6 C 0.404 3.596 7 O -0.455 6.455 8 N -0.368 5.368 9 C 0.060 3.940 10 H 0.113 0.887 11 C -0.164 4.164 12 C -0.164 4.164 13 C 0.053 3.947 14 H 0.115 0.885 15 N -0.325 5.325 16 C 0.212 3.788 17 N -0.283 5.283 18 C 0.030 3.970 19 C -0.302 4.302 20 C -0.164 4.164 21 O -0.336 6.336 22 Si 0.580 3.420 23 C 0.055 3.945 24 N -0.292 5.292 25 C -0.164 4.164 26 C -0.172 4.172 27 H 0.078 0.922 28 H 0.090 0.910 29 H 0.106 0.894 30 H 0.086 0.914 31 H 0.100 0.900 32 H 0.086 0.914 33 H 0.106 0.894 34 H 0.090 0.910 35 H 0.078 0.922 36 H 0.240 0.760 37 H 0.088 0.912 38 H 0.091 0.909 39 H 0.096 0.904 40 H 0.097 0.903 41 H 0.251 0.749 42 H 0.183 0.817 43 H 0.137 0.863 44 H 0.223 0.777 45 H -0.178 1.178 46 H -0.183 1.183 47 H 0.186 0.814 48 H 0.105 0.895 49 H 0.094 0.906 50 H 0.094 0.906 51 H 0.082 0.918 Dipole moment (debyes) X Y Z Total from point charges 1.986 -0.373 -1.792 2.701 hybrid contribution -0.747 0.309 1.396 1.613 sum 1.239 -0.065 -0.397 1.303 Atomic orbital electron populations 1.22516 0.93871 1.05021 1.02667 1.22107 0.94418 0.91546 0.81898 1.21879 1.02327 0.92403 1.03313 1.22520 1.01587 1.03453 0.96538 1.86309 1.71530 1.23532 1.46691 1.18124 0.78748 0.80613 0.82126 1.90911 1.40921 1.70348 1.43292 1.44852 1.55635 1.12582 1.23708 1.21016 0.93762 0.78723 1.00495 0.88738 1.21794 0.98508 0.96165 0.99957 1.21896 0.97391 0.95521 1.01611 1.21017 0.95102 0.98008 0.80565 0.88485 1.44380 1.69930 1.13868 1.04345 1.19421 0.87399 0.85705 0.86276 1.67935 1.19626 1.06592 1.34157 1.22840 0.88282 0.98887 0.87013 1.21628 1.12413 0.98432 0.97725 1.24664 0.92687 1.09065 0.89997 1.86614 1.27036 1.79906 1.40058 0.95202 0.87273 0.75304 0.84188 1.22829 0.85591 0.89932 0.96104 1.67991 1.22752 1.39711 0.98770 1.21827 0.98664 0.95203 1.00676 1.21972 0.97233 0.96971 1.01051 0.92169 0.90973 0.89422 0.91409 0.89953 0.91416 0.89412 0.90965 0.92153 0.76026 0.91165 0.90873 0.90440 0.90263 0.74874 0.81734 0.86269 0.77676 1.17816 1.18270 0.81392 0.89461 0.90613 0.90581 0.91811 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.24 8.37 37.16 0.31 0.07 16 2 C 0.14 0.19 1.13 -90.62 -0.10 0.09 16 3 C -0.14 0.08 8.85 37.16 0.33 0.41 16 4 C -0.18 -0.25 8.37 37.16 0.31 0.06 16 5 O -0.37 -0.90 9.94 -40.31 -0.40 -1.31 16 6 C 0.65 1.70 8.02 54.06 0.43 2.14 16 7 O -0.57 -2.66 11.54 -19.27 -0.22 -2.88 16 8 N -0.71 0.15 5.08 -58.73 -0.30 -0.14 16 9 C 0.16 -0.19 2.45 -67.93 -0.17 -0.36 16 10 H 0.09 0.03 7.58 -51.93 -0.39 -0.37 16 11 C -0.13 0.28 5.23 -26.73 -0.14 0.14 16 12 C -0.12 0.26 5.62 -26.73 -0.15 0.11 16 13 C 0.16 -0.26 2.78 -67.93 -0.19 -0.45 16 14 H 0.10 -0.06 7.50 -51.93 -0.39 -0.45 16 15 N -0.69 0.36 4.38 -55.80 -0.24 0.11 16 16 C 0.57 0.89 8.40 -322.83 -2.71 -1.83 16 17 N -0.56 -0.72 9.20 -13.93 -0.13 -0.84 16 18 C 0.20 -0.06 9.92 -17.22 -0.17 -0.23 16 19 C -0.29 0.18 5.36 -104.35 -0.56 -0.38 16 20 C -0.05 0.08 2.83 36.00 0.10 0.18 16 21 O -0.53 -0.04 12.85 -35.23 -0.45 -0.49 16 22 Si 0.68 -1.45 29.95 -169.99 -5.09 -6.54 16 23 C 0.22 0.12 10.99 -17.22 -0.19 -0.07 16 24 N -0.57 -1.18 10.46 -13.93 -0.15 -1.33 16 25 C -0.13 0.28 5.61 -26.73 -0.15 0.13 16 26 C -0.13 0.20 5.32 -26.73 -0.14 0.05 16 27 H 0.06 0.07 8.14 -51.93 -0.42 -0.36 16 28 H 0.07 0.00 8.14 -51.93 -0.42 -0.42 16 29 H 0.09 0.29 5.88 -51.93 -0.31 -0.01 16 30 H 0.07 -0.04 8.14 -51.93 -0.42 -0.47 16 31 H 0.08 -0.15 8.14 -51.93 -0.42 -0.58 16 32 H 0.07 -0.04 8.14 -51.92 -0.42 -0.47 16 33 H 0.09 0.30 5.88 -51.93 -0.31 -0.01 16 34 H 0.07 0.00 8.14 -51.93 -0.42 -0.42 16 35 H 0.06 0.07 8.14 -51.93 -0.42 -0.35 16 36 H 0.41 -0.75 8.71 -40.82 -0.36 -1.10 16 37 H 0.07 -0.13 7.61 -51.93 -0.39 -0.53 16 38 H 0.07 -0.15 8.14 -51.93 -0.42 -0.57 16 39 H 0.08 -0.06 8.14 -51.93 -0.42 -0.49 16 40 H 0.08 -0.21 8.14 -51.93 -0.42 -0.63 16 41 H 0.41 -0.41 6.98 -40.82 -0.28 -0.69 16 42 H 0.17 -0.41 5.01 -52.48 -0.26 -0.67 16 43 H 0.12 -0.29 7.96 -51.93 -0.41 -0.70 16 44 H 0.38 -0.92 8.70 45.56 0.40 -0.52 16 45 H -0.25 -0.35 7.11 56.52 0.40 0.06 16 46 H -0.26 0.07 7.02 56.52 0.40 0.47 16 47 H 0.17 -0.19 8.06 -52.49 -0.42 -0.61 16 48 H 0.09 -0.22 8.14 -51.93 -0.42 -0.64 16 49 H 0.08 -0.15 8.14 -51.93 -0.42 -0.57 16 50 H 0.08 0.03 8.14 -51.93 -0.42 -0.39 16 51 H 0.06 -0.12 6.51 -51.93 -0.34 -0.45 16 LS Contribution 399.01 15.07 6.01 6.01 Total: 0.00 -6.99 399.01 -12.32 -19.31 By element: Atomic # 1 Polarization: -3.79 SS G_CDS: -8.17 Total: -11.96 kcal Atomic # 6 Polarization: 3.24 SS G_CDS: -3.19 Total: 0.06 kcal Atomic # 7 Polarization: -1.39 SS G_CDS: -0.82 Total: -2.21 kcal Atomic # 8 Polarization: -3.60 SS G_CDS: -1.08 Total: -4.68 kcal Atomic # 14 Polarization: -1.45 SS G_CDS: -5.09 Total: -6.54 kcal Total LS contribution 6.01 Total: 6.01 kcal Total: -6.99 -12.32 -19.31 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_12867096_12175864.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -37.319 kcal (2) G-P(sol) polarization free energy of solvation -6.990 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -44.309 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.324 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.313 kcal (6) G-S(sol) free energy of system = (1) + (5) -56.633 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.06 seconds