Wall clock time and date at job start Mon Mar 8 2021 07:08:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86304 * 109.46725 * 2 1 4 4 C 1.50699 * 109.47184 * 119.99892 * 2 1 3 5 5 C 1.33322 * 125.95140 * 65.00264 * 4 2 1 6 6 N 1.32129 * 114.58097 * 180.02562 * 5 4 2 7 7 C 1.29682 * 116.86138 * 0.02562 * 6 5 4 8 8 N 1.38614 * 124.94817 * 180.02562 * 7 6 5 9 9 C 1.46507 * 119.99752 * 359.96863 * 8 7 6 10 10 H 1.08997 * 109.46824 * 35.00719 * 9 8 7 11 11 C 1.53003 * 109.46591 * 155.00394 * 9 8 7 12 12 C 1.52998 * 109.47251 * 60.00568 * 11 9 8 13 13 C 1.52996 * 109.47218 * 59.99675 * 12 11 9 14 14 H 1.08994 * 109.47280 * 60.00521 * 13 12 11 15 15 O 1.42904 * 109.46908 * 180.02562 * 13 12 11 16 16 C 1.52995 * 109.47327 * 299.99850 * 13 12 11 17 17 C 1.53001 * 109.47038 * 60.00238 * 16 13 12 18 18 S 1.70965 * 110.10352 * 359.72653 * 7 6 5 19 19 H 0.96700 * 114.00234 * 299.99899 * 1 2 3 20 20 H 1.09002 * 109.47382 * 239.99890 * 2 1 3 21 21 H 1.48499 * 109.99644 * 178.68105 * 3 2 1 22 22 H 1.48492 * 110.00078 * 299.99611 * 3 2 1 23 23 H 1.07998 * 122.71319 * 359.97438 * 5 4 2 24 24 H 0.96996 * 120.00469 * 179.97438 * 8 7 6 25 25 H 1.09000 * 109.46579 * 180.02562 * 11 9 8 26 26 H 1.09001 * 109.47208 * 299.99464 * 11 9 8 27 27 H 1.09008 * 109.46867 * 179.97438 * 12 11 9 28 28 H 1.09000 * 109.46663 * 299.99296 * 12 11 9 29 29 H 0.96697 * 114.00420 * 180.02562 * 15 13 12 30 30 H 1.08994 * 109.47496 * 180.02562 * 16 13 12 31 31 H 1.09000 * 109.47062 * 300.00690 * 16 13 12 32 32 H 1.09002 * 109.46975 * 180.02562 * 17 16 13 33 33 H 1.08995 * 109.47237 * 59.99696 * 17 16 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9314 -0.7104 1.2305 5 6 1.7623 -2.0025 1.5122 6 7 2.2974 -2.3902 2.6563 7 6 2.9100 -1.4843 3.3535 8 7 3.5294 -1.7054 4.5736 9 6 3.5213 -3.0449 5.1671 10 1 3.5861 -3.7928 4.3768 11 6 4.7183 -3.1926 6.1086 12 6 4.6274 -2.1428 7.2178 13 6 3.3312 -2.3440 8.0054 14 1 3.3253 -3.3404 8.4470 15 8 3.2461 -1.3630 9.0410 16 6 2.1343 -2.1961 7.0640 17 6 2.2251 -3.2460 5.9547 18 16 2.8493 0.0206 2.5444 19 1 -0.3933 0.4417 0.7650 20 1 1.7924 -0.5138 -0.8900 21 1 3.5345 1.7704 0.0321 22 1 1.5615 2.4679 -1.2085 23 1 1.2302 -2.6776 0.8584 24 1 3.9682 -0.9734 5.0345 25 1 4.7126 -4.1893 6.5498 26 1 5.6418 -3.0495 5.5474 27 1 5.4800 -2.2485 7.8888 28 1 4.6334 -1.1463 6.7762 29 1 2.4477 -1.4308 9.5823 30 1 1.2108 -2.3389 7.6251 31 1 2.1403 -1.1996 6.6224 32 1 1.3726 -3.1403 5.2838 33 1 2.2192 -4.2425 6.3962 There are 44 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 44 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_12892150_15704118.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 07:08:18 Heat of formation + Delta-G solvation = -35.780273 kcal Electronic energy + Delta-G solvation = -17361.419471 eV Core-core repulsion = 14515.165586 eV Total energy + Delta-G solvation = -2846.253885 eV No. of doubly occupied orbitals = 44 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 257.087 amu Computer time = 0.37 seconds Orbital eigenvalues (eV) -41.09028 -40.08538 -37.96478 -37.26206 -34.60938 -32.02586 -31.29601 -29.81735 -26.53539 -24.67319 -23.88869 -23.33231 -21.56390 -19.96240 -19.74970 -18.31881 -17.97666 -17.35547 -16.67314 -16.32424 -16.21780 -15.70329 -15.49362 -15.41850 -14.83672 -14.69436 -14.16583 -14.04798 -13.92325 -13.40611 -12.98306 -12.84054 -12.42356 -12.33306 -12.27435 -12.02193 -11.95359 -11.39798 -11.09389 -10.83594 -10.73754 -10.21197 -10.12982 -8.71802 -5.12719 0.00861 0.06586 0.72343 1.27914 1.60372 1.92413 2.06603 2.14691 3.06241 3.45954 3.52998 3.57549 3.70541 3.89873 3.94275 3.97503 4.07472 4.22723 4.28197 4.39445 4.49324 4.52799 4.71006 4.77186 4.85405 4.92209 4.95945 5.00007 5.10330 5.21344 5.23274 5.86866 6.06460 6.53865 6.61258 7.03641 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.537 6.537 2 C -0.010 4.010 3 Si 0.656 3.344 4 C -0.308 4.308 5 C 0.120 3.880 6 N -0.551 5.551 7 C 0.329 3.671 8 N -0.686 5.686 9 C 0.159 3.841 10 H 0.094 0.906 11 C -0.127 4.127 12 C -0.115 4.115 13 C 0.103 3.897 14 H 0.057 0.943 15 O -0.569 6.569 16 C -0.150 4.150 17 C -0.129 4.129 18 S 0.082 5.918 19 H 0.379 0.621 20 H 0.121 0.879 21 H -0.242 1.242 22 H -0.236 1.236 23 H 0.175 0.825 24 H 0.413 0.587 25 H 0.085 0.915 26 H 0.078 0.922 27 H 0.076 0.924 28 H 0.066 0.934 29 H 0.380 0.620 30 H 0.066 0.934 31 H 0.070 0.930 32 H 0.074 0.926 33 H 0.074 0.926 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.029 0.396 3.283 3.307 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.343 6.343 2 C -0.124 4.124 3 Si 0.556 3.444 4 C -0.431 4.431 5 C -0.031 4.031 6 N -0.276 5.276 7 C -0.041 4.041 8 N -0.326 5.326 9 C 0.052 3.948 10 H 0.112 0.888 11 C -0.165 4.165 12 C -0.152 4.152 13 C 0.044 3.956 14 H 0.075 0.925 15 O -0.375 6.375 16 C -0.188 4.188 17 C -0.168 4.168 18 S 0.331 5.669 19 H 0.227 0.773 20 H 0.139 0.861 21 H -0.166 1.166 22 H -0.159 1.159 23 H 0.192 0.808 24 H 0.251 0.749 25 H 0.104 0.896 26 H 0.097 0.903 27 H 0.095 0.905 28 H 0.085 0.915 29 H 0.227 0.773 30 H 0.084 0.916 31 H 0.089 0.911 32 H 0.093 0.907 33 H 0.093 0.907 Dipole moment (debyes) X Y Z Total from point charges 1.489 1.157 2.529 3.155 hybrid contribution -0.799 -1.105 -0.203 1.379 sum 0.690 0.052 2.327 2.427 Atomic orbital electron populations 1.86512 1.16978 1.81686 1.49103 1.24101 0.84778 1.08874 0.94650 0.94976 0.82020 0.78039 0.89327 1.25541 1.15159 0.98352 1.04044 1.21324 0.96539 0.93096 0.92153 1.66492 1.18977 1.33451 1.08702 1.23752 0.95309 0.93152 0.91914 1.44271 1.58992 1.12223 1.17149 1.21038 0.94701 0.83726 0.95324 0.88761 1.21848 0.98099 1.00390 0.96165 1.21474 0.97259 0.99460 0.97028 1.21834 0.94857 0.91363 0.87507 0.92492 1.86509 1.47325 1.56528 1.47125 1.22237 0.98477 1.00556 0.97547 1.21904 0.98449 0.99172 0.97248 1.83966 1.55603 1.11822 1.15474 0.77320 0.86146 1.16615 1.15938 0.80822 0.74852 0.89617 0.90303 0.90514 0.91525 0.77278 0.91578 0.91147 0.90742 0.90698 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.24 12.88 -35.23 -0.45 -0.69 16 2 C -0.01 0.00 2.99 36.01 0.11 0.11 16 3 Si 0.66 -0.26 31.07 -169.99 -5.28 -5.54 16 4 C -0.31 -0.28 5.73 -36.03 -0.21 -0.48 16 5 C 0.12 0.23 11.24 -19.14 -0.22 0.02 16 6 N -0.55 -1.51 9.90 -15.21 -0.15 -1.66 16 7 C 0.33 0.40 8.06 -87.68 -0.71 -0.31 16 8 N -0.69 0.52 4.39 -55.78 -0.24 0.27 16 9 C 0.16 -0.19 2.91 -67.92 -0.20 -0.39 16 10 H 0.09 0.02 7.76 -51.93 -0.40 -0.38 16 11 C -0.13 0.33 5.61 -26.73 -0.15 0.18 16 12 C -0.11 0.20 5.40 -26.73 -0.14 0.05 16 13 C 0.10 -0.14 3.47 -26.74 -0.09 -0.23 16 14 H 0.06 -0.10 8.14 -51.93 -0.42 -0.53 16 15 O -0.57 -0.01 13.32 -35.23 -0.47 -0.48 16 16 C -0.15 0.23 5.39 -26.73 -0.14 0.08 16 17 C -0.13 0.16 5.62 -26.73 -0.15 0.01 16 18 S 0.08 0.01 20.59 -107.50 -2.21 -2.20 16 19 H 0.38 -1.17 8.70 45.56 0.40 -0.78 16 20 H 0.12 0.02 7.96 -51.93 -0.41 -0.39 16 21 H -0.24 -0.47 7.11 56.52 0.40 -0.06 16 22 H -0.24 -0.51 7.11 56.52 0.40 -0.11 16 23 H 0.17 0.15 8.06 -52.49 -0.42 -0.27 16 24 H 0.41 -0.83 6.99 -40.82 -0.29 -1.12 16 25 H 0.09 -0.27 8.14 -51.93 -0.42 -0.70 16 26 H 0.08 -0.21 8.14 -51.93 -0.42 -0.63 16 27 H 0.08 -0.10 8.14 -51.92 -0.42 -0.52 16 28 H 0.07 -0.11 6.51 -51.93 -0.34 -0.45 16 29 H 0.38 -1.34 9.08 45.56 0.41 -0.92 16 30 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 31 H 0.07 -0.03 7.60 -51.93 -0.39 -0.43 16 32 H 0.07 0.05 8.14 -51.93 -0.42 -0.37 16 33 H 0.07 -0.15 8.14 -51.93 -0.42 -0.57 16 LS Contribution 282.41 15.07 4.26 4.26 Total: 0.00 -5.73 282.41 -10.06 -15.79 By element: Atomic # 1 Polarization: -5.18 SS G_CDS: -3.60 Total: -8.78 kcal Atomic # 6 Polarization: 0.93 SS G_CDS: -1.90 Total: -0.97 kcal Atomic # 7 Polarization: -0.99 SS G_CDS: -0.40 Total: -1.38 kcal Atomic # 8 Polarization: -0.25 SS G_CDS: -0.92 Total: -1.17 kcal Atomic # 14 Polarization: -0.26 SS G_CDS: -5.28 Total: -5.54 kcal Atomic # 16 Polarization: 0.01 SS G_CDS: -2.21 Total: -2.20 kcal Total LS contribution 4.26 Total: 4.26 kcal Total: -5.73 -10.06 -15.79 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_12892150_15704118.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -19.990 kcal (2) G-P(sol) polarization free energy of solvation -5.730 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -25.720 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.060 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.790 kcal (6) G-S(sol) free energy of system = (1) + (5) -35.780 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.37 seconds