Wall clock time and date at job start Mon Mar 8 2021 05:23:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.42900 * 114.00333 * 2 1 4 4 C 1.52992 * 109.47327 * 180.02562 * 3 2 1 5 5 H 1.09004 * 112.90752 * 316.24432 * 4 3 2 6 6 C 1.53784 * 113.61673 * 87.49801 * 4 3 2 7 7 C 1.53778 * 87.08081 * 139.98135 * 6 4 3 8 8 H 1.08999 * 113.69218 * 89.12660 * 7 6 4 9 9 N 1.46504 * 113.61207 * 220.01967 * 7 6 4 10 10 C 1.39002 * 119.99966 * 252.49437 * 9 7 6 11 11 N 1.32393 * 119.70530 * 179.73191 * 10 9 7 12 12 C 1.31977 * 121.62209 * 179.71796 * 11 10 9 13 13 C 1.38026 * 120.85598 * 0.55366 * 12 11 10 14 14 C 1.50694 * 120.33507 * 179.74734 * 13 12 11 15 15 O 1.42908 * 109.46862 * 119.98564 * 14 13 12 16 16 Si 1.86294 * 109.47477 * 359.97438 * 14 13 12 17 17 C 1.38890 * 119.32563 * 359.73392 * 13 12 11 18 18 C 1.38294 * 118.50863 * 359.97438 * 17 13 12 19 19 C 1.53778 * 87.08449 * 334.56700 * 7 6 4 20 20 H 1.08991 * 109.46902 * 60.00377 * 1 2 3 21 21 H 1.08997 * 109.47142 * 180.02562 * 1 2 3 22 22 H 1.08999 * 109.47087 * 300.00657 * 1 2 3 23 23 H 1.08996 * 109.47230 * 59.99343 * 3 2 1 24 24 H 1.09007 * 109.46260 * 299.99608 * 3 2 1 25 25 H 1.08993 * 113.61313 * 254.52732 * 6 4 3 26 26 H 1.09000 * 113.61578 * 25.43464 * 6 4 3 27 27 H 0.97001 * 119.99776 * 72.50291 * 9 7 6 28 28 H 1.07998 * 119.57356 * 180.28807 * 12 11 10 29 29 H 1.09002 * 109.47528 * 239.98087 * 14 13 12 30 30 H 0.96703 * 113.99411 * 299.99878 * 15 14 13 31 31 H 1.48504 * 109.99854 * 58.67421 * 16 14 13 32 32 H 1.48498 * 110.00491 * 179.97438 * 16 14 13 33 33 H 1.07997 * 120.74347 * 179.97438 * 17 13 12 34 34 H 1.07998 * 120.45273 * 180.02562 * 18 17 13 35 35 H 1.08998 * 113.61879 * 270.88747 * 19 7 6 36 36 H 1.08997 * 113.69304 * 139.98833 * 19 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0103 1.3054 0.0000 4 6 3.5355 1.1846 -0.0006 5 1 3.9014 0.4280 0.6935 6 6 4.1442 1.0749 -1.4086 7 6 5.2672 1.9993 -0.9096 8 1 6.1073 1.4667 -0.4639 9 7 5.6858 2.9991 -1.8953 10 6 6.9119 2.8711 -2.5374 11 7 7.2820 3.7751 -3.4310 12 6 8.4400 3.6937 -4.0590 13 6 9.3073 2.6487 -3.8120 14 6 10.6241 2.5643 -4.5399 15 8 11.6942 2.5908 -3.5932 16 14 10.7858 4.0120 -5.7011 17 6 8.9542 1.6761 -2.8856 18 6 7.7371 1.7913 -2.2390 19 6 4.2605 2.5352 0.1220 20 1 -0.3633 0.5137 -0.8900 21 1 -0.3633 -1.0276 0.0005 22 1 -0.3633 0.5139 0.8899 23 1 1.6886 1.8464 0.8899 24 1 1.6887 1.8462 -0.8901 25 1 4.4848 0.0705 -1.6599 26 1 3.5257 1.5205 -2.1877 27 1 5.1073 3.7504 -2.0997 28 1 8.7106 4.4522 -4.7786 29 1 10.6657 1.6357 -5.1093 30 1 11.7191 3.3906 -3.0501 31 1 10.6985 5.2849 -4.9411 32 1 12.0806 3.9408 -6.4247 33 1 9.6152 0.8484 -2.6749 34 1 7.4313 1.0530 -1.5125 35 1 3.6737 3.3801 -0.2386 36 1 4.6938 2.7103 1.1067 There are 46 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 46 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_12906262_13915762.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 05:23:44 Heat of formation + Delta-G solvation = -5.504305 kcal Electronic energy + Delta-G solvation = -17915.230924 eV Core-core repulsion = 14981.137657 eV Total energy + Delta-G solvation = -2934.093267 eV No. of doubly occupied orbitals = 46 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 251.131 amu Computer time = 0.43 seconds Orbital eigenvalues (eV) -41.51586 -40.46975 -38.48851 -37.88943 -35.42643 -33.35103 -31.43399 -29.56860 -27.13672 -26.82084 -26.14031 -24.85822 -23.54342 -22.12372 -20.78702 -18.76166 -18.49569 -17.77017 -17.35695 -16.92416 -16.53058 -16.39348 -16.21003 -16.17089 -15.35406 -15.23654 -15.06510 -14.30929 -14.10226 -13.98322 -13.61753 -13.42299 -13.18501 -13.08647 -12.54166 -12.33863 -12.09737 -11.93262 -11.84419 -11.50246 -11.07168 -10.72001 -10.63768 -10.50173 -10.33610 -8.67976 -4.93312 0.27225 0.45465 1.32922 1.62248 1.99557 2.07069 2.71049 2.86799 3.33541 3.41543 3.46938 3.58093 3.69158 3.75937 3.80454 4.00062 4.08694 4.21203 4.25097 4.35220 4.37253 4.42177 4.47231 4.54189 4.59872 4.62973 4.65939 4.73734 4.76677 4.92735 4.95065 5.04115 5.20590 5.35849 5.55866 6.01871 6.14830 6.44068 6.54833 7.18555 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.031 3.969 2 O -0.391 6.391 3 C 0.072 3.928 4 C -0.107 4.107 5 H 0.104 0.896 6 C -0.146 4.146 7 C 0.130 3.870 8 H 0.112 0.888 9 N -0.711 5.711 10 C 0.408 3.592 11 N -0.541 5.541 12 C 0.156 3.844 13 C -0.235 4.235 14 C -0.059 4.059 15 O -0.532 6.532 16 Si 0.678 3.322 17 C -0.005 4.005 18 C -0.239 4.239 19 C -0.137 4.137 20 H 0.041 0.959 21 H 0.087 0.913 22 H 0.041 0.959 23 H 0.051 0.949 24 H 0.051 0.949 25 H 0.076 0.924 26 H 0.087 0.913 27 H 0.406 0.594 28 H 0.155 0.845 29 H 0.116 0.884 30 H 0.375 0.625 31 H -0.259 1.259 32 H -0.256 1.256 33 H 0.136 0.864 34 H 0.134 0.866 35 H 0.090 0.910 36 H 0.081 0.919 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.372 -0.032 0.774 3.460 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.309 6.309 3 C -0.005 4.005 4 C -0.126 4.126 5 H 0.122 0.878 6 C -0.185 4.185 7 C 0.024 3.976 8 H 0.130 0.870 9 N -0.342 5.342 10 C 0.173 3.827 11 N -0.257 5.257 12 C -0.001 4.001 13 C -0.240 4.240 14 C -0.170 4.170 15 O -0.338 6.338 16 Si 0.579 3.421 17 C -0.031 4.031 18 C -0.264 4.264 19 C -0.176 4.176 20 H 0.060 0.940 21 H 0.106 0.894 22 H 0.060 0.940 23 H 0.070 0.930 24 H 0.069 0.931 25 H 0.094 0.906 26 H 0.106 0.894 27 H 0.242 0.758 28 H 0.172 0.828 29 H 0.134 0.866 30 H 0.223 0.777 31 H -0.183 1.183 32 H -0.181 1.181 33 H 0.153 0.847 34 H 0.151 0.849 35 H 0.108 0.892 36 H 0.099 0.901 Dipole moment (debyes) X Y Z Total from point charges -3.270 0.486 0.246 3.315 hybrid contribution 0.441 0.004 1.247 1.323 sum -2.829 0.490 1.494 3.237 Atomic orbital electron populations 1.22763 0.80755 1.03034 1.00048 1.87889 1.19873 1.27769 1.95414 1.22510 0.92767 0.84947 1.00283 1.22336 0.93278 0.98321 0.98669 0.87761 1.23617 0.97438 1.00737 0.96738 1.22549 0.95965 0.90015 0.89097 0.87040 1.44545 1.17252 1.29056 1.43354 1.18451 0.86372 0.89346 0.88563 1.67165 1.18836 1.28759 1.10989 1.22212 0.88019 0.95088 0.94795 1.20926 0.99659 0.99133 1.04284 1.24753 0.84058 1.11956 0.96204 1.86592 1.50055 1.45083 1.52100 0.95165 0.86912 0.76186 0.83801 1.21192 0.94090 0.96530 0.91300 1.21486 0.96875 1.01265 1.06746 1.23366 0.97087 0.97224 0.99895 0.94005 0.89430 0.93990 0.93038 0.93108 0.90555 0.89425 0.75778 0.82842 0.86577 0.77741 1.18333 1.18088 0.84651 0.84853 0.89199 0.90050 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 11.01 101.05 1.11 1.09 16 2 O -0.39 -0.59 10.70 -35.23 -0.38 -0.97 16 3 C 0.07 -0.06 5.78 37.15 0.21 0.16 16 4 C -0.11 0.18 4.01 -89.81 -0.36 -0.18 16 5 H 0.10 -0.15 8.14 -51.93 -0.42 -0.57 16 6 C -0.15 0.21 7.43 -25.92 -0.19 0.01 16 7 C 0.13 -0.24 4.03 -67.12 -0.27 -0.51 16 8 H 0.11 -0.26 6.10 -51.93 -0.32 -0.57 16 9 N -0.71 0.16 5.53 -53.14 -0.29 -0.13 16 10 C 0.41 0.74 7.65 -155.02 -1.19 -0.44 16 11 N -0.54 -1.57 10.39 -12.44 -0.13 -1.70 16 12 C 0.16 0.22 9.84 -17.57 -0.17 0.05 16 13 C -0.23 -0.19 5.40 -104.46 -0.56 -0.75 16 14 C -0.06 0.00 2.84 36.00 0.10 0.10 16 15 O -0.53 -0.73 12.78 -35.23 -0.45 -1.18 16 16 Si 0.68 -0.46 29.82 -169.99 -5.07 -5.53 16 17 C -0.01 0.00 9.77 -39.32 -0.38 -0.39 16 18 C -0.24 -0.20 9.29 -39.23 -0.36 -0.57 16 19 C -0.14 0.37 7.39 -25.92 -0.19 0.18 16 20 H 0.04 -0.06 8.14 -51.93 -0.42 -0.48 16 21 H 0.09 -0.13 8.14 -51.93 -0.42 -0.56 16 22 H 0.04 -0.06 8.14 -51.93 -0.42 -0.49 16 23 H 0.05 -0.07 8.14 -51.93 -0.42 -0.50 16 24 H 0.05 -0.07 7.84 -51.93 -0.41 -0.47 16 25 H 0.08 -0.07 8.14 -51.93 -0.42 -0.49 16 26 H 0.09 -0.08 7.89 -51.93 -0.41 -0.49 16 27 H 0.41 -0.29 8.85 -40.82 -0.36 -0.65 16 28 H 0.15 -0.09 4.88 -52.49 -0.26 -0.34 16 29 H 0.12 -0.08 7.96 -51.93 -0.41 -0.50 16 30 H 0.38 -0.47 8.70 45.56 0.40 -0.07 16 31 H -0.26 -0.34 7.11 56.52 0.40 0.06 16 32 H -0.26 -0.66 7.11 56.52 0.40 -0.25 16 33 H 0.14 -0.04 8.06 -52.49 -0.42 -0.46 16 34 H 0.13 -0.12 6.03 -52.49 -0.32 -0.44 16 35 H 0.09 -0.28 8.08 -51.93 -0.42 -0.70 16 36 H 0.08 -0.24 8.14 -51.93 -0.42 -0.66 16 LS Contribution 299.25 15.07 4.51 4.51 Total: 0.00 -5.74 299.25 -9.15 -14.89 By element: Atomic # 1 Polarization: -3.55 SS G_CDS: -5.08 Total: -8.63 kcal Atomic # 6 Polarization: 1.01 SS G_CDS: -2.26 Total: -1.25 kcal Atomic # 7 Polarization: -1.41 SS G_CDS: -0.42 Total: -1.84 kcal Atomic # 8 Polarization: -1.33 SS G_CDS: -0.83 Total: -2.15 kcal Atomic # 14 Polarization: -0.46 SS G_CDS: -5.07 Total: -5.53 kcal Total LS contribution 4.51 Total: 4.51 kcal Total: -5.74 -9.15 -14.89 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_12906262_13915762.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 9.390 kcal (2) G-P(sol) polarization free energy of solvation -5.745 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 3.646 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.150 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -14.894 kcal (6) G-S(sol) free energy of system = (1) + (5) -5.504 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.43 seconds