Wall clock time and date at job start Mon Mar 8 2021 05:23:46 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42908 * 1 3 3 C 1.42904 * 113.99677 * 2 1 4 4 C 1.53001 * 109.47062 * 180.02562 * 3 2 1 5 5 H 1.09006 * 112.85041 * 43.79853 * 4 3 2 6 6 C 1.53774 * 113.61751 * 174.99795 * 4 3 2 7 7 C 1.53779 * 87.08060 * 139.97711 * 6 4 3 8 8 H 1.08998 * 113.61201 * 89.20439 * 7 6 4 9 9 N 1.46504 * 113.61705 * 220.01743 * 7 6 4 10 10 C 1.38608 * 120.00174 * 203.47283 * 9 7 6 11 11 N 1.29677 * 124.94973 * 359.97438 * 10 9 7 12 12 C 1.32124 * 116.86481 * 180.02562 * 11 10 9 13 13 C 1.33320 * 114.58045 * 0.02562 * 12 11 10 14 14 C 1.50700 * 125.95274 * 180.02562 * 13 12 11 15 15 O 1.42894 * 109.47431 * 64.99295 * 14 13 12 16 16 Si 1.86303 * 109.47163 * 184.99733 * 14 13 12 17 17 S 1.70974 * 124.94672 * 179.97438 * 10 9 7 18 18 C 1.53775 * 87.17672 * 334.60991 * 7 6 4 19 19 H 1.08996 * 109.46920 * 60.00006 * 1 2 3 20 20 H 1.08993 * 109.47071 * 179.97438 * 1 2 3 21 21 H 1.08998 * 109.46937 * 300.00470 * 1 2 3 22 22 H 1.08998 * 109.47316 * 59.99672 * 3 2 1 23 23 H 1.09004 * 109.47166 * 299.99694 * 3 2 1 24 24 H 1.09007 * 113.61382 * 25.42990 * 6 4 3 25 25 H 1.09002 * 113.69262 * 254.53741 * 6 4 3 26 26 H 0.97003 * 119.99618 * 23.47069 * 9 7 6 27 27 H 1.08004 * 122.70746 * 179.72660 * 12 11 10 28 28 H 1.09002 * 109.46719 * 304.99246 * 14 13 12 29 29 H 0.96700 * 113.99838 * 180.02562 * 15 14 13 30 30 H 1.48506 * 109.99844 * 178.67662 * 16 14 13 31 31 H 1.48501 * 109.99794 * 299.99232 * 16 14 13 32 32 H 1.08998 * 113.61675 * 139.93374 * 18 7 6 33 33 H 1.09002 * 113.61536 * 270.84612 * 18 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0103 1.3055 0.0000 4 6 3.5355 1.1848 -0.0006 5 1 3.9000 0.4287 -0.6962 6 6 4.2603 2.5354 -0.1235 7 6 5.2678 1.9993 0.9072 8 1 6.1076 1.4669 0.4608 9 7 5.6872 2.9988 1.8928 10 6 6.8961 2.8542 2.5553 11 7 7.7276 1.8750 2.3784 12 6 8.8362 1.8959 3.0970 13 6 8.9449 2.9402 3.9185 14 6 10.0973 3.2177 4.8491 15 8 11.2786 3.4650 4.0841 16 14 9.7081 4.7121 5.8913 17 16 7.5080 3.9408 3.7249 18 6 4.1471 1.0730 1.4078 19 1 -0.3633 0.5138 -0.8900 20 1 -0.3633 -1.0276 -0.0005 21 1 -0.3633 0.5139 0.8899 22 1 1.6886 1.8465 0.8899 23 1 1.6886 1.8464 -0.8900 24 1 3.6738 3.3802 0.2377 25 1 4.6945 2.7115 -1.1077 26 1 5.1188 3.7619 2.0817 27 1 9.5909 1.1264 3.0282 28 1 10.2575 2.3552 5.4962 29 1 12.0621 3.6511 4.6194 30 1 10.8232 4.9772 6.8355 31 1 9.4877 5.8949 5.0208 32 1 4.4896 0.0688 1.6576 33 1 3.5295 1.5172 2.1885 There are 44 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 44 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_12906262_15704118.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 05:23:46 Heat of formation + Delta-G solvation = 3.041370 kcal Electronic energy + Delta-G solvation = -16546.348804 eV Core-core repulsion = 13701.778352 eV Total energy + Delta-G solvation = -2844.570452 eV No. of doubly occupied orbitals = 44 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 257.087 amu Computer time = 0.41 seconds Orbital eigenvalues (eV) -40.97839 -40.13117 -38.39902 -37.84851 -35.33803 -31.43264 -29.68675 -27.11678 -26.82230 -26.29205 -24.72853 -23.15645 -20.96589 -20.47883 -19.31639 -18.54663 -17.62338 -17.40652 -16.89014 -16.81179 -16.15507 -15.89277 -15.71028 -15.32291 -15.30824 -14.44046 -14.13227 -13.94369 -13.56073 -13.25436 -13.10806 -12.86526 -12.43732 -12.37073 -12.25284 -12.02014 -11.82653 -11.41717 -11.00487 -10.64176 -10.59680 -10.19273 -10.09928 -8.65131 -5.04473 0.02640 0.12730 0.75752 1.26078 1.55038 1.91821 2.10677 2.19069 2.74989 3.38057 3.41087 3.52560 3.72773 3.80184 3.86982 4.01922 4.24842 4.31164 4.39716 4.42651 4.48095 4.51327 4.60003 4.69624 4.73860 4.76521 4.84019 5.00183 5.05997 5.13060 5.38398 5.92287 6.11487 6.19020 6.42993 7.09368 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.031 3.969 2 O -0.390 6.390 3 C 0.072 3.928 4 C -0.106 4.106 5 H 0.104 0.896 6 C -0.139 4.139 7 C 0.140 3.860 8 H 0.119 0.881 9 N -0.683 5.683 10 C 0.326 3.674 11 N -0.550 5.550 12 C 0.119 3.881 13 C -0.261 4.261 14 C -0.019 4.019 15 O -0.535 6.535 16 Si 0.650 3.350 17 S 0.092 5.908 18 C -0.144 4.144 19 H 0.041 0.959 20 H 0.087 0.913 21 H 0.041 0.959 22 H 0.050 0.950 23 H 0.051 0.949 24 H 0.088 0.912 25 H 0.081 0.919 26 H 0.414 0.586 27 H 0.175 0.825 28 H 0.084 0.916 29 H 0.380 0.620 30 H -0.242 1.242 31 H -0.239 1.239 32 H 0.077 0.923 33 H 0.084 0.916 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.219 1.454 1.931 4.026 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.309 6.309 3 C -0.004 4.004 4 C -0.125 4.125 5 H 0.123 0.877 6 C -0.178 4.178 7 C 0.033 3.967 8 H 0.137 0.863 9 N -0.321 5.321 10 C -0.045 4.045 11 N -0.275 5.275 12 C -0.032 4.032 13 C -0.383 4.383 14 C -0.131 4.131 15 O -0.342 6.342 16 Si 0.549 3.451 17 S 0.342 5.658 18 C -0.183 4.183 19 H 0.060 0.940 20 H 0.105 0.895 21 H 0.060 0.940 22 H 0.068 0.932 23 H 0.069 0.931 24 H 0.106 0.894 25 H 0.100 0.900 26 H 0.251 0.749 27 H 0.192 0.808 28 H 0.102 0.898 29 H 0.228 0.772 30 H -0.165 1.165 31 H -0.163 1.163 32 H 0.095 0.905 33 H 0.103 0.897 Dipole moment (debyes) X Y Z Total from point charges -3.797 2.407 1.616 4.778 hybrid contribution 1.309 -0.262 -0.272 1.362 sum -2.489 2.145 1.344 3.550 Atomic orbital electron populations 1.22762 0.80819 1.03017 1.00001 1.87902 1.19811 1.27773 1.95399 1.22512 0.92820 0.84926 1.00185 1.22349 0.93082 0.98273 0.98826 0.87743 1.23393 0.97132 0.97165 1.00097 1.22574 0.96192 0.89529 0.88435 0.86336 1.44093 1.16771 1.28322 1.42909 1.23745 0.91978 0.93825 0.94938 1.66464 1.05187 1.25382 1.30437 1.21303 0.93637 0.97430 0.90797 1.24294 1.01036 1.01249 1.11771 1.23704 0.84313 1.08739 0.96379 1.86623 1.18614 1.92614 1.36379 0.95206 0.90219 0.78179 0.81488 1.83955 1.15382 1.27252 1.39258 1.23602 0.97205 1.01050 0.96464 0.94015 0.89451 0.94036 0.93162 0.93077 0.89358 0.90012 0.74888 0.80813 0.89821 0.77153 1.16513 1.16283 0.90464 0.89707 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 11.01 101.05 1.11 1.10 16 2 O -0.39 -0.75 10.70 -35.23 -0.38 -1.13 16 3 C 0.07 -0.03 5.78 37.16 0.21 0.18 16 4 C -0.11 0.09 4.01 -89.72 -0.36 -0.27 16 5 H 0.10 -0.02 8.14 -51.93 -0.42 -0.45 16 6 C -0.14 0.29 7.39 -25.92 -0.19 0.10 16 7 C 0.14 -0.06 4.33 -67.12 -0.29 -0.35 16 8 H 0.12 0.15 7.70 -51.93 -0.40 -0.25 16 9 N -0.68 0.17 5.52 -54.99 -0.30 -0.13 16 10 C 0.33 0.71 8.09 -87.69 -0.71 0.00 16 11 N -0.55 -2.17 9.85 -15.21 -0.15 -2.32 16 12 C 0.12 0.37 11.24 -19.14 -0.22 0.16 16 13 C -0.26 -0.58 5.76 -36.03 -0.21 -0.79 16 14 C -0.02 -0.01 2.98 36.01 0.11 0.10 16 15 O -0.53 -0.80 12.86 -35.23 -0.45 -1.25 16 16 Si 0.65 -0.17 31.07 -169.99 -5.28 -5.45 16 17 S 0.09 0.11 20.59 -107.50 -2.21 -2.10 16 18 C -0.14 0.05 7.45 -25.83 -0.19 -0.14 16 19 H 0.04 -0.06 8.14 -51.93 -0.42 -0.48 16 20 H 0.09 -0.11 8.14 -51.93 -0.42 -0.53 16 21 H 0.04 -0.06 8.14 -51.93 -0.42 -0.48 16 22 H 0.05 -0.06 7.85 -51.93 -0.41 -0.47 16 23 H 0.05 -0.06 8.14 -51.93 -0.42 -0.48 16 24 H 0.09 -0.29 8.07 -51.93 -0.42 -0.71 16 25 H 0.08 -0.18 8.14 -51.93 -0.42 -0.60 16 26 H 0.41 -1.06 8.84 -40.82 -0.36 -1.42 16 27 H 0.17 0.29 8.06 -52.48 -0.42 -0.14 16 28 H 0.08 -0.13 7.96 -51.93 -0.41 -0.54 16 29 H 0.38 -1.05 8.74 45.56 0.40 -0.65 16 30 H -0.24 -0.25 7.11 56.52 0.40 0.16 16 31 H -0.24 -0.67 7.11 56.52 0.40 -0.27 16 32 H 0.08 0.07 8.14 -51.93 -0.42 -0.35 16 33 H 0.08 -0.05 7.90 -51.93 -0.41 -0.46 16 LS Contribution 294.94 15.07 4.44 4.44 Total: 0.00 -6.32 294.94 -9.66 -15.97 By element: Atomic # 1 Polarization: -3.54 SS G_CDS: -4.59 Total: -8.13 kcal Atomic # 6 Polarization: 0.82 SS G_CDS: -0.73 Total: 0.09 kcal Atomic # 7 Polarization: -2.00 SS G_CDS: -0.45 Total: -2.45 kcal Atomic # 8 Polarization: -1.55 SS G_CDS: -0.83 Total: -2.38 kcal Atomic # 14 Polarization: -0.17 SS G_CDS: -5.28 Total: -5.45 kcal Atomic # 16 Polarization: 0.11 SS G_CDS: -2.21 Total: -2.10 kcal Total LS contribution 4.44 Total: 4.44 kcal Total: -6.32 -9.66 -15.97 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_12906262_15704118.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 19.015 kcal (2) G-P(sol) polarization free energy of solvation -6.317 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 12.698 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.657 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.974 kcal (6) G-S(sol) free energy of system = (1) + (5) 3.041 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.41 seconds