Wall clock time and date at job start Mon Mar 8 2021 05:23:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42895 * 1 3 3 C 1.42897 * 114.00111 * 2 1 4 4 C 1.53001 * 109.47534 * 180.02562 * 3 2 1 5 5 H 1.09005 * 112.90400 * 43.74655 * 4 3 2 6 6 C 1.53776 * 113.61843 * 174.99809 * 4 3 2 7 7 C 1.53783 * 87.07878 * 139.98176 * 6 4 3 8 8 H 1.09002 * 113.61342 * 89.20698 * 7 6 4 9 9 N 1.46507 * 113.61454 * 220.01563 * 7 6 4 10 10 C 1.39140 * 120.00035 * 203.47190 * 9 7 6 11 11 N 1.32328 * 119.72029 * 359.97438 * 10 9 7 12 12 C 1.32015 * 121.64787 * 180.02562 * 11 10 9 13 13 C 1.37976 * 120.89981 * 0.02661 * 12 11 10 14 14 C 1.50698 * 120.32815 * 179.97438 * 13 12 11 15 15 O 1.42901 * 109.47499 * 244.99646 * 14 13 12 16 16 Si 1.86302 * 109.47133 * 4.99796 * 14 13 12 17 17 C 1.38907 * 119.34885 * 359.94946 * 13 12 11 18 18 C 1.38444 * 118.48255 * 0.04988 * 17 13 12 19 19 F 1.35102 * 120.47167 * 180.25194 * 18 17 13 20 20 C 1.53777 * 87.17558 * 334.61242 * 7 6 4 21 21 H 1.09003 * 109.47367 * 299.99702 * 1 2 3 22 22 H 1.08998 * 109.47334 * 59.99602 * 1 2 3 23 23 H 1.09002 * 109.47473 * 180.02562 * 1 2 3 24 24 H 1.09000 * 109.47195 * 59.99974 * 3 2 1 25 25 H 1.09002 * 109.47639 * 300.00133 * 3 2 1 26 26 H 1.08999 * 113.61580 * 25.43849 * 6 4 3 27 27 H 1.08994 * 113.69252 * 254.54099 * 6 4 3 28 28 H 0.97000 * 119.99290 * 23.48026 * 9 7 6 29 29 H 1.07999 * 119.55037 * 179.97438 * 12 11 10 30 30 H 1.09004 * 109.47183 * 124.99322 * 14 13 12 31 31 H 0.96701 * 113.99568 * 59.99590 * 15 14 13 32 32 H 1.48492 * 110.00311 * 180.02562 * 16 14 13 33 33 H 1.48499 * 109.99643 * 301.32211 * 16 14 13 34 34 H 1.07995 * 120.75977 * 180.02562 * 17 13 12 35 35 H 1.08993 * 113.61621 * 139.94072 * 20 7 6 36 36 H 1.09005 * 113.61337 * 270.84347 * 20 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0102 1.3054 0.0000 4 6 3.5354 1.1847 -0.0006 5 1 3.9008 0.4282 -0.6952 6 6 4.2603 2.5353 -0.1235 7 6 5.2678 1.9991 0.9071 8 1 6.1077 1.4667 0.4606 9 7 5.6873 2.9986 1.8927 10 6 6.9009 2.8534 2.5577 11 7 7.6716 1.8100 2.2960 12 6 8.8297 1.6343 2.9047 13 6 9.2813 2.5392 3.8434 14 6 10.6052 2.3256 4.5309 15 8 10.3875 2.1038 5.9256 16 14 11.4568 0.8426 3.7917 17 6 8.5039 3.6492 4.1481 18 6 7.2940 3.8075 3.4940 19 9 6.5082 4.8750 3.7557 20 6 4.1471 1.0727 1.4077 21 1 -0.3634 0.5138 0.8900 22 1 -0.3634 0.5139 -0.8899 23 1 -0.3634 -1.0277 0.0005 24 1 1.6886 1.8464 0.8900 25 1 1.6886 1.8464 -0.8900 26 1 3.6739 3.3801 0.2378 27 1 4.6944 2.7114 -1.1077 28 1 5.1189 3.7616 2.0817 29 1 9.4316 0.7701 2.6654 30 1 11.2309 3.2081 4.3966 31 1 9.8373 1.3327 6.1200 32 1 12.7634 0.6209 4.4615 33 1 10.5999 -0.3611 3.9398 34 1 8.8354 4.3721 4.8787 35 1 4.4896 0.0686 1.6575 36 1 3.5296 1.5169 2.1885 There are 49 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 49 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_27_12906262_17656566.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 05:23:50 Heat of formation + Delta-G solvation = -47.799630 kcal Electronic energy + Delta-G solvation = -20236.355031 eV Core-core repulsion = 16830.973726 eV Total energy + Delta-G solvation = -3405.381305 eV No. of doubly occupied orbitals = 49 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 269.121 amu Computer time = 0.55 seconds Orbital eigenvalues (eV) -49.96356 -41.50379 -40.41006 -38.49109 -37.94925 -35.54583 -33.23892 -31.49667 -29.49880 -27.07929 -26.75942 -26.25548 -25.17048 -23.24083 -22.53329 -20.77939 -19.24629 -18.62072 -18.36037 -17.66359 -17.39918 -17.03206 -16.86209 -16.59620 -16.24823 -16.05087 -15.73799 -15.50136 -15.28275 -14.88357 -14.34926 -14.06064 -13.98692 -13.46141 -13.46081 -13.19749 -13.01973 -12.66805 -12.41409 -12.08186 -11.97217 -11.79100 -11.38287 -11.13440 -10.75330 -10.65347 -10.60342 -10.53636 -8.76850 -4.88592 -0.08973 0.09946 1.31918 1.62823 1.98390 1.99692 2.52100 2.79342 3.02334 3.27867 3.43680 3.49815 3.60137 3.62641 3.83872 3.85790 3.92643 3.99540 4.31567 4.37425 4.43243 4.47020 4.51482 4.56262 4.58429 4.70740 4.73138 4.79015 4.82241 4.83444 4.98416 5.04320 5.09691 5.26370 5.49512 5.98524 6.19030 6.22430 6.49932 6.95656 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.025 3.975 2 O -0.417 6.417 3 C 0.069 3.931 4 C -0.104 4.104 5 H 0.099 0.901 6 C -0.127 4.127 7 C 0.137 3.863 8 H 0.114 0.886 9 N -0.703 5.703 10 C 0.382 3.618 11 N -0.527 5.527 12 C 0.146 3.854 13 C -0.203 4.203 14 C -0.068 4.068 15 O -0.549 6.549 16 Si 0.766 3.234 17 C -0.040 4.040 18 C -0.038 4.038 19 F -0.141 7.141 20 C -0.145 4.145 21 H 0.047 0.953 22 H 0.050 0.950 23 H 0.091 0.909 24 H 0.054 0.946 25 H 0.061 0.939 26 H 0.098 0.902 27 H 0.089 0.911 28 H 0.416 0.584 29 H 0.181 0.819 30 H 0.130 0.870 31 H 0.386 0.614 32 H -0.300 1.300 33 H -0.277 1.277 34 H 0.155 0.845 35 H 0.062 0.938 36 H 0.080 0.920 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.874 0.831 -3.268 3.484 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.071 4.071 2 O -0.336 6.336 3 C -0.008 4.008 4 C -0.122 4.122 5 H 0.118 0.882 6 C -0.165 4.165 7 C 0.032 3.968 8 H 0.132 0.868 9 N -0.335 5.335 10 C 0.143 3.857 11 N -0.244 5.244 12 C -0.011 4.011 13 C -0.208 4.208 14 C -0.177 4.177 15 O -0.357 6.357 16 Si 0.670 3.330 17 C -0.066 4.066 18 C -0.064 4.064 19 F -0.120 7.120 20 C -0.184 4.184 21 H 0.065 0.935 22 H 0.069 0.931 23 H 0.110 0.890 24 H 0.073 0.927 25 H 0.079 0.921 26 H 0.116 0.884 27 H 0.108 0.892 28 H 0.254 0.746 29 H 0.198 0.802 30 H 0.147 0.853 31 H 0.236 0.764 32 H -0.228 1.228 33 H -0.203 1.203 34 H 0.173 0.827 35 H 0.081 0.919 36 H 0.099 0.901 Dipole moment (debyes) X Y Z Total from point charges -0.458 -0.283 -3.828 3.866 hybrid contribution -1.124 1.063 1.922 2.468 sum -1.583 0.781 -1.906 2.598 Atomic orbital electron populations 1.22885 0.79868 1.03593 1.00728 1.87854 1.21069 1.29138 1.95572 1.22625 0.92984 0.84300 1.00847 1.22313 0.92919 0.98935 0.98081 0.88240 1.23321 0.96403 0.96715 1.00051 1.22487 0.95967 0.89564 0.88805 0.86846 1.44678 1.17542 1.28438 1.42835 1.18631 0.88432 0.89360 0.89259 1.67345 1.07159 1.20510 1.29411 1.22737 0.90476 0.97639 0.90282 1.20891 1.00144 0.97091 1.02715 1.25039 0.96118 1.12708 0.83829 1.86587 1.74146 1.52342 1.22620 0.94120 0.76012 0.74138 0.88692 1.21451 0.90767 0.97714 0.96656 1.18144 0.94236 0.89249 1.04812 1.91465 1.73497 1.53580 1.93438 1.23569 0.97674 1.00290 0.96897 0.93469 0.93123 0.89042 0.92732 0.92125 0.88402 0.89221 0.74576 0.80212 0.85273 0.76440 1.22837 1.20311 0.82714 0.91923 0.90126 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 11.01 113.37 1.25 1.23 16 2 O -0.42 -1.82 10.70 -148.98 -1.59 -3.42 16 3 C 0.07 -0.04 5.78 71.98 0.42 0.38 16 4 C -0.10 0.16 4.01 -10.21 -0.04 0.12 16 5 H 0.10 -0.04 8.14 -2.38 -0.02 -0.06 16 6 C -0.13 0.57 7.39 31.12 0.23 0.80 16 7 C 0.14 -0.14 4.24 45.52 0.19 0.06 16 8 H 0.11 0.09 7.45 -2.39 -0.02 0.07 16 9 N -0.70 -0.32 5.51 -321.78 -1.77 -2.09 16 10 C 0.38 1.42 7.49 133.09 1.00 2.42 16 11 N -0.53 -1.91 9.15 -193.04 -1.77 -3.68 16 12 C 0.15 -0.02 9.84 84.60 0.83 0.81 16 13 C -0.20 0.15 5.36 -19.77 -0.11 0.04 16 14 C -0.07 0.17 2.82 71.24 0.20 0.37 16 15 O -0.55 -0.51 12.84 -148.98 -1.91 -2.43 16 16 Si 0.77 -3.05 29.91 68.60 2.05 -1.00 16 17 C -0.04 -0.06 9.82 22.48 0.22 0.16 16 18 C -0.04 -0.15 7.35 22.59 0.17 0.02 16 19 F -0.14 -0.72 16.65 44.97 0.75 0.03 16 20 C -0.15 -0.02 7.45 31.18 0.23 0.21 16 21 H 0.05 -0.11 8.14 -2.39 -0.02 -0.13 16 22 H 0.05 -0.14 8.14 -2.39 -0.02 -0.16 16 23 H 0.09 -0.20 8.14 -2.39 -0.02 -0.22 16 24 H 0.05 -0.10 7.85 -2.39 -0.02 -0.12 16 25 H 0.06 -0.16 8.14 -2.39 -0.02 -0.18 16 26 H 0.10 -0.63 8.07 -2.39 -0.02 -0.65 16 27 H 0.09 -0.50 8.14 -2.39 -0.02 -0.52 16 28 H 0.42 -0.77 8.18 -92.71 -0.76 -1.53 16 29 H 0.18 -0.86 4.84 -2.91 -0.01 -0.87 16 30 H 0.13 -0.58 7.96 -2.39 -0.02 -0.60 16 31 H 0.39 -1.69 8.70 -74.06 -0.64 -2.34 16 32 H -0.30 -1.20 7.11 99.48 0.71 -0.49 16 33 H -0.28 0.16 7.01 99.48 0.70 0.86 16 34 H 0.16 -0.05 8.06 -2.91 -0.02 -0.08 16 35 H 0.06 0.18 8.14 -2.39 -0.02 0.16 16 36 H 0.08 0.05 7.90 -2.38 -0.02 0.03 16 Total: 0.00 -12.86 307.44 0.08 -12.78 By element: Atomic # 1 Polarization: -6.55 SS G_CDS: -0.27 Total: -6.81 kcal Atomic # 6 Polarization: 2.03 SS G_CDS: 4.59 Total: 6.62 kcal Atomic # 7 Polarization: -2.23 SS G_CDS: -3.54 Total: -5.77 kcal Atomic # 8 Polarization: -2.34 SS G_CDS: -3.51 Total: -5.84 kcal Atomic # 9 Polarization: -0.72 SS G_CDS: 0.75 Total: 0.03 kcal Atomic # 14 Polarization: -3.05 SS G_CDS: 2.05 Total: -1.00 kcal Total: -12.86 0.08 -12.78 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_12906262_17656566.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -35.015 kcal (2) G-P(sol) polarization free energy of solvation -12.860 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -47.875 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.075 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -12.784 kcal (6) G-S(sol) free energy of system = (1) + (5) -47.800 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.56 seconds