Wall clock time and date at job start Mon Mar 8 2021 05:24:14 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50706 * 1 3 3 C 1.33321 * 125.95102 * 2 1 4 4 C 1.50700 * 122.71301 * 0.02562 * 3 2 1 5 5 O 1.42901 * 109.47184 * 29.98833 * 4 3 2 6 6 Si 1.86294 * 109.47626 * 149.99487 * 4 3 2 7 7 N 1.32123 * 114.58139 * 179.75440 * 3 2 1 8 8 C 1.29690 * 116.86037 * 0.47573 * 7 3 2 9 9 N 1.38609 * 124.95217 * 179.81041 * 8 7 3 10 10 C 1.46497 * 120.00495 * 179.72030 * 9 8 7 11 11 C 1.53004 * 109.47104 * 174.69089 * 10 9 8 12 12 C 1.50697 * 112.84982 * 305.88580 * 11 10 9 13 13 C 1.38242 * 119.99856 * 102.96711 * 12 11 10 14 14 C 1.38230 * 119.99475 * 179.76486 * 13 12 11 15 15 C 1.38238 * 120.00842 * 0.50847 * 14 13 12 16 16 C 1.38243 * 119.99320 * 359.74311 * 15 14 13 17 17 C 1.38233 * 119.99919 * 283.24013 * 12 11 10 18 18 C 1.53783 * 113.61238 * 174.68940 * 11 10 9 19 19 C 1.53775 * 87.07833 * 270.88504 * 18 11 10 20 20 H 1.09008 * 113.61402 * 219.93454 * 19 18 11 21 21 O 1.42907 * 113.61582 * 89.12046 * 19 18 11 22 22 C 1.53777 * 87.08625 * 334.56678 * 19 18 11 23 23 S 1.70969 * 110.10238 * 359.54955 * 8 7 3 24 24 H 1.08994 * 109.47461 * 180.02562 * 1 2 3 25 25 H 1.09001 * 109.46971 * 300.02022 * 1 2 3 26 26 H 1.09006 * 109.47081 * 60.01589 * 1 2 3 27 27 H 1.09007 * 109.46637 * 269.99768 * 4 3 2 28 28 H 0.96698 * 113.99632 * 180.02562 * 5 4 3 29 29 H 1.48496 * 110.00326 * 178.67955 * 6 4 3 30 30 H 1.48501 * 110.00007 * 300.00016 * 6 4 3 31 31 H 0.97006 * 119.99186 * 359.72297 * 9 8 7 32 32 H 1.09002 * 109.46800 * 54.69251 * 10 9 8 33 33 H 1.08997 * 109.47168 * 294.69264 * 10 9 8 34 34 H 1.07999 * 119.99828 * 359.97438 * 13 12 11 35 35 H 1.08003 * 119.99739 * 180.23220 * 14 13 12 36 36 H 1.07992 * 120.00343 * 179.72565 * 15 14 13 37 37 H 1.07998 * 119.99818 * 179.97438 * 16 15 14 38 38 H 1.07994 * 120.00270 * 0.02562 * 17 12 11 39 39 H 1.08992 * 113.61110 * 156.33487 * 18 11 10 40 40 H 1.09002 * 113.69023 * 25.44288 * 18 11 10 41 41 H 0.96701 * 114.00154 * 179.97438 * 21 19 18 42 42 H 1.09002 * 113.61437 * 139.98173 * 22 19 18 43 43 H 1.08998 * 113.61673 * 270.88537 * 22 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 6 2.2898 1.0793 0.0000 4 6 1.7415 2.4830 0.0006 5 8 0.4815 2.5019 0.6744 6 14 2.9325 3.6147 0.8787 7 7 3.5851 0.8188 0.0052 8 6 3.9315 -0.4310 -0.0001 9 7 5.2384 -0.8927 0.0002 10 6 5.5065 -2.3330 0.0001 11 6 7.0120 -2.5715 -0.1330 12 6 7.6109 -1.8777 -1.3292 13 6 8.3348 -0.7120 -1.1613 14 6 8.8883 -0.0782 -2.2580 15 6 8.7091 -0.6043 -3.5238 16 6 7.9807 -1.7671 -3.6922 17 6 7.4316 -2.4038 -2.5948 18 6 7.4141 -4.0510 -0.0137 19 6 7.5314 -3.8155 1.5014 20 1 8.3843 -4.3188 1.9568 21 8 6.3115 -4.0386 2.2115 22 6 7.7907 -2.3360 1.1720 23 16 2.5412 -1.4261 -0.0002 24 1 -0.3634 -1.0276 0.0005 25 1 -0.3633 0.5142 0.8898 26 1 -0.3633 0.5136 -0.8902 27 1 1.6090 2.8216 -1.0271 28 1 0.0690 3.3757 0.7126 29 1 2.4185 5.0077 0.8583 30 1 3.1217 3.1636 2.2809 31 1 5.9755 -0.2621 0.0005 32 1 4.9893 -2.7987 -0.8388 33 1 5.1507 -2.7689 0.9336 34 1 8.4707 -0.2983 -0.1730 35 1 9.4570 0.8305 -2.1265 36 1 9.1378 -0.1067 -4.3810 37 1 7.8404 -2.1779 -4.6811 38 1 6.8620 -3.3118 -2.7265 39 1 8.3641 -4.2853 -0.4939 40 1 6.6190 -4.7445 -0.2875 41 1 6.3790 -3.8925 3.1651 42 1 7.2986 -1.6438 1.8553 43 1 8.8436 -2.1014 1.0159 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_13154428_15704122.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 05:24:14 Heat of formation + Delta-G solvation = 28.401049 kcal Electronic energy + Delta-G solvation = -26533.736642 eV Core-core repulsion = 22866.286068 eV Total energy + Delta-G solvation = -3667.450574 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 333.119 amu Computer time = 0.81 seconds Orbital eigenvalues (eV) -41.89641 -40.72639 -39.38953 -37.88795 -36.82741 -35.61541 -32.72184 -31.91284 -31.77320 -29.63169 -27.98213 -27.09308 -25.44094 -24.71206 -23.88894 -23.22816 -22.45866 -20.72620 -19.61067 -19.14928 -18.67863 -18.09352 -17.80983 -17.17274 -16.61598 -16.44353 -16.22582 -15.86118 -15.59134 -15.46762 -15.33773 -15.13036 -14.61717 -14.40965 -14.29608 -13.96554 -13.82932 -13.75859 -13.52354 -13.30487 -13.16906 -13.11133 -12.94819 -12.83128 -12.30771 -12.14117 -11.99642 -11.80656 -11.52530 -11.33400 -11.00827 -10.74290 -10.43848 -10.34037 -9.85280 -9.79984 -9.66396 -8.41120 -4.61624 0.22620 0.34825 0.39583 0.46933 0.96745 1.45640 1.81129 1.96716 2.08706 2.23937 2.78535 2.91997 3.13842 3.26677 3.40437 3.51748 3.64643 3.80356 4.03353 4.05149 4.08360 4.19055 4.26177 4.32080 4.41898 4.49675 4.52851 4.55166 4.56687 4.63076 4.67246 4.71549 4.84326 4.94202 4.98374 5.01647 5.07142 5.07939 5.09282 5.27185 5.48458 5.54546 5.59756 5.61739 5.73981 6.05221 6.42772 6.52959 6.54015 7.10639 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.056 4.056 2 C -0.235 4.235 3 C 0.106 3.894 4 C -0.041 4.041 5 O -0.534 6.534 6 Si 0.718 3.282 7 N -0.543 5.543 8 C 0.324 3.676 9 N -0.688 5.688 10 C 0.145 3.855 11 C -0.047 4.047 12 C -0.070 4.070 13 C -0.117 4.117 14 C -0.114 4.114 15 C -0.121 4.121 16 C -0.116 4.116 17 C -0.111 4.111 18 C -0.113 4.113 19 C 0.079 3.921 20 H 0.074 0.926 21 O -0.549 6.549 22 C -0.162 4.162 23 S 0.099 5.901 24 H 0.055 0.945 25 H 0.086 0.914 26 H 0.070 0.930 27 H 0.080 0.920 28 H 0.381 0.619 29 H -0.265 1.265 30 H -0.263 1.263 31 H 0.411 0.589 32 H 0.068 0.932 33 H 0.095 0.905 34 H 0.121 0.879 35 H 0.123 0.877 36 H 0.121 0.879 37 H 0.122 0.878 38 H 0.120 0.880 39 H 0.104 0.896 40 H 0.084 0.916 41 H 0.384 0.616 42 H 0.079 0.921 43 H 0.097 0.903 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.460 -1.575 -0.767 3.878 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.115 4.115 2 C -0.358 4.358 3 C -0.024 4.024 4 C -0.153 4.153 5 O -0.341 6.341 6 Si 0.618 3.382 7 N -0.270 5.270 8 C -0.047 4.047 9 N -0.329 5.329 10 C 0.021 3.979 11 C -0.048 4.048 12 C -0.070 4.070 13 C -0.135 4.135 14 C -0.132 4.132 15 C -0.139 4.139 16 C -0.134 4.134 17 C -0.129 4.129 18 C -0.151 4.151 19 C 0.020 3.980 20 H 0.092 0.908 21 O -0.355 6.355 22 C -0.200 4.200 23 S 0.348 5.652 24 H 0.074 0.926 25 H 0.104 0.896 26 H 0.088 0.912 27 H 0.098 0.902 28 H 0.229 0.771 29 H -0.191 1.191 30 H -0.188 1.188 31 H 0.249 0.751 32 H 0.086 0.914 33 H 0.113 0.887 34 H 0.139 0.861 35 H 0.141 0.859 36 H 0.139 0.861 37 H 0.140 0.860 38 H 0.138 0.862 39 H 0.122 0.878 40 H 0.103 0.897 41 H 0.232 0.768 42 H 0.098 0.902 43 H 0.115 0.885 Dipole moment (debyes) X Y Z Total from point charges 3.783 -2.705 -0.623 4.692 hybrid contribution -0.754 1.485 0.431 1.721 sum 3.029 -1.220 -0.192 3.271 Atomic orbital electron populations 1.20061 0.86636 1.01258 1.03553 1.25063 1.01276 0.92647 1.16798 1.18693 0.86593 0.94850 1.02276 1.23986 0.92055 0.97893 1.01386 1.86547 1.33263 1.34943 1.79389 0.93669 0.87509 0.74932 0.82062 1.65586 1.16718 1.16585 1.28119 1.23119 0.91723 0.91208 0.98680 1.43826 1.01635 1.07176 1.80277 1.21420 0.93709 0.79305 1.03435 1.20819 0.93668 0.96895 0.93393 1.19511 0.98271 0.95497 0.93688 1.21021 0.98340 0.95188 0.98998 1.21172 0.99538 0.99866 0.92657 1.21212 0.98939 0.96278 0.97429 1.21179 0.97656 0.95741 0.98792 1.20957 0.99821 1.00127 0.91962 1.23104 1.03287 0.94495 0.94223 1.22666 0.87207 0.94851 0.93308 0.90838 1.86433 1.32934 1.91798 1.24356 1.23803 1.01240 0.98458 0.96499 1.83999 0.96568 1.10532 1.74128 0.92556 0.89598 0.91173 0.90177 0.77095 1.19124 1.18764 0.75056 0.91388 0.88685 0.86059 0.85914 0.86051 0.86012 0.86194 0.87796 0.89749 0.76753 0.90195 0.88460 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.06 -0.13 8.91 36.01 0.32 0.19 16 2 C -0.23 -0.95 6.50 -36.02 -0.23 -1.19 16 3 C 0.11 0.47 5.96 -84.18 -0.50 -0.03 16 4 C -0.04 -0.09 2.93 36.01 0.11 0.01 16 5 O -0.53 -0.87 9.80 -35.23 -0.35 -1.22 16 6 Si 0.72 1.53 32.08 -169.99 -5.45 -3.92 16 7 N -0.54 -2.47 8.94 -11.36 -0.10 -2.57 16 8 C 0.32 1.09 8.24 -87.68 -0.72 0.37 16 9 N -0.69 -0.77 5.44 -62.30 -0.34 -1.11 16 10 C 0.15 -0.03 4.82 -4.04 -0.02 -0.05 16 11 C -0.05 0.08 0.70 -154.85 -0.11 -0.03 16 12 C -0.07 0.04 4.25 -104.62 -0.45 -0.40 16 13 C -0.12 0.07 8.24 -39.58 -0.33 -0.26 16 14 C -0.11 0.02 10.05 -39.58 -0.40 -0.38 16 15 C -0.12 -0.01 10.05 -39.58 -0.40 -0.41 16 16 C -0.12 -0.02 10.05 -39.58 -0.40 -0.41 16 17 C -0.11 0.01 9.39 -39.58 -0.37 -0.37 16 18 C -0.11 0.24 6.72 -25.92 -0.17 0.06 16 19 C 0.08 -0.19 5.28 -25.92 -0.14 -0.33 16 20 H 0.07 -0.24 8.14 -51.92 -0.42 -0.66 16 21 O -0.55 0.87 11.51 -35.23 -0.41 0.47 16 22 C -0.16 0.40 6.05 -25.92 -0.16 0.25 16 23 S 0.10 0.28 22.27 -107.50 -2.39 -2.11 16 24 H 0.06 0.08 8.14 -51.93 -0.42 -0.34 16 25 H 0.09 0.24 6.73 -51.93 -0.35 -0.11 16 26 H 0.07 0.13 8.14 -51.93 -0.42 -0.30 16 27 H 0.08 0.06 7.96 -51.92 -0.41 -0.36 16 28 H 0.38 -0.94 8.74 45.56 0.40 -0.54 16 29 H -0.27 -0.77 7.11 56.52 0.40 -0.37 16 30 H -0.26 -1.58 7.11 56.52 0.40 -1.18 16 31 H 0.41 0.32 7.50 -40.82 -0.31 0.01 16 32 H 0.07 0.01 8.07 -51.93 -0.42 -0.41 16 33 H 0.10 0.04 5.95 -51.93 -0.31 -0.27 16 34 H 0.12 -0.23 7.02 -52.49 -0.37 -0.60 16 35 H 0.12 -0.20 8.06 -52.48 -0.42 -0.62 16 36 H 0.12 -0.15 8.06 -52.49 -0.42 -0.58 16 37 H 0.12 -0.15 8.06 -52.49 -0.42 -0.57 16 38 H 0.12 -0.13 8.04 -52.49 -0.42 -0.55 16 39 H 0.10 -0.27 8.09 -51.93 -0.42 -0.69 16 40 H 0.08 -0.14 8.10 -51.93 -0.42 -0.56 16 41 H 0.38 -1.87 9.12 45.56 0.42 -1.45 16 42 H 0.08 -0.16 8.10 -51.93 -0.42 -0.58 16 43 H 0.10 -0.28 7.45 -51.93 -0.39 -0.67 16 LS Contribution 361.87 15.07 5.45 5.45 Total: 0.00 -6.69 361.87 -12.71 -19.39 By element: Atomic # 1 Polarization: -6.23 SS G_CDS: -5.16 Total: -11.39 kcal Atomic # 6 Polarization: 0.98 SS G_CDS: -3.96 Total: -2.98 kcal Atomic # 7 Polarization: -3.24 SS G_CDS: -0.44 Total: -3.68 kcal Atomic # 8 Polarization: 0.00 SS G_CDS: -0.75 Total: -0.75 kcal Atomic # 14 Polarization: 1.53 SS G_CDS: -5.45 Total: -3.92 kcal Atomic # 16 Polarization: 0.28 SS G_CDS: -2.39 Total: -2.11 kcal Total LS contribution 5.45 Total: 5.45 kcal Total: -6.69 -12.71 -19.39 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_13154428_15704122.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 47.793 kcal (2) G-P(sol) polarization free energy of solvation -6.687 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 41.106 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.705 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.392 kcal (6) G-S(sol) free energy of system = (1) + (5) 28.401 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.81 seconds