Wall clock time and date at job start Mon Mar 8 2021 05:19:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86301 * 109.47209 * 2 1 4 4 C 1.50695 * 109.47429 * 240.00374 * 2 1 3 5 5 C 1.38612 * 120.72074 * 299.99606 * 4 2 1 6 6 N 1.32273 * 119.19810 * 179.97438 * 5 4 2 7 7 C 1.32492 * 120.74274 * 0.02562 * 6 5 4 8 8 N 1.38409 * 119.21698 * 179.97438 * 7 6 5 9 9 C 1.46498 * 119.99772 * 180.27705 * 8 7 6 10 10 H 1.09001 * 112.85160 * 25.05341 * 9 8 7 11 11 C 1.53784 * 113.61507 * 156.25314 * 9 8 7 12 12 C 1.53777 * 87.08269 * 89.11382 * 11 9 8 13 13 H 1.09007 * 113.61513 * 270.88559 * 12 11 9 14 14 C 1.52991 * 113.61535 * 140.06799 * 12 11 9 15 15 O 1.42904 * 109.47415 * 174.99875 * 14 12 11 16 16 C 1.53781 * 113.61116 * 253.85694 * 9 8 7 17 17 N 1.32489 * 121.56429 * 0.27365 * 7 6 5 18 18 C 1.32282 * 120.74091 * 359.43918 * 17 7 6 19 19 H 0.96696 * 114.00077 * 299.99554 * 1 2 3 20 20 H 1.09001 * 109.47399 * 119.99905 * 2 1 3 21 21 H 1.48504 * 110.00178 * 300.00479 * 3 2 1 22 22 H 1.48503 * 109.99833 * 61.31870 * 3 2 1 23 23 H 1.07997 * 120.39562 * 359.96239 * 5 4 2 24 24 H 0.97001 * 119.99783 * 359.97438 * 8 7 6 25 25 H 1.08996 * 113.61507 * 203.66303 * 11 9 8 26 26 H 1.09008 * 113.60985 * 334.56259 * 11 9 8 27 27 H 1.09000 * 109.46971 * 294.99937 * 14 12 11 28 28 H 1.09001 * 109.47324 * 54.99823 * 14 12 11 29 29 H 0.96700 * 114.00157 * 179.97438 * 15 14 12 30 30 H 1.08993 * 113.61427 * 25.43567 * 16 9 8 31 31 H 1.09003 * 113.61197 * 156.33752 * 16 9 8 32 32 H 1.08001 * 120.40197 * 180.24949 * 18 17 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7103 -1.2304 5 6 1.6058 -2.0371 -1.4647 6 7 2.0628 -2.6309 -2.5547 7 6 2.8234 -1.9721 -3.4166 8 7 3.2848 -2.6245 -4.5467 9 6 4.1320 -1.9143 -5.5079 10 1 4.6767 -1.0835 -5.0592 11 6 5.0161 -2.8447 -6.3551 12 6 3.8492 -2.9145 -7.3542 13 1 3.1415 -3.7164 -7.1437 14 6 4.2930 -2.8828 -8.8180 15 8 3.1567 -3.0688 -9.6644 16 6 3.4061 -1.5424 -6.8117 17 7 3.1577 -0.7053 -3.2194 18 6 2.7294 -0.0512 -2.1524 19 1 -0.3933 0.4416 0.7650 20 1 1.7924 -0.5138 0.8900 21 1 1.5614 2.4680 -1.2085 22 1 1.5879 2.4585 1.2243 23 1 0.9867 -2.5795 -0.7655 24 1 3.0508 -3.5533 -4.7000 25 1 5.9050 -2.3572 -6.7553 26 1 5.2355 -3.7972 -5.8725 27 1 4.7553 -1.9202 -9.0367 28 1 5.0136 -3.6809 -8.9966 29 1 3.3640 -3.0596 -10.6088 30 1 2.3266 -1.4443 -6.6976 31 1 3.8557 -0.6995 -7.3366 32 1 3.0019 0.9825 -1.9991 There are 43 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 43 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_13270476_12175864.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 05:19:22 Heat of formation + Delta-G solvation = 9.756032 kcal Electronic energy + Delta-G solvation = -16564.351268 eV Core-core repulsion = 13721.031447 eV Total energy + Delta-G solvation = -2843.319821 eV No. of doubly occupied orbitals = 43 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 238.110 amu Computer time = 0.26 seconds Orbital eigenvalues (eV) -42.03997 -40.51418 -38.11118 -37.39334 -35.36412 -34.60470 -32.18451 -28.86833 -26.79157 -26.43311 -25.79109 -23.50608 -22.92127 -20.47083 -19.44448 -18.66543 -18.32653 -18.13225 -16.71261 -16.61289 -16.30033 -15.85846 -15.78536 -15.57881 -15.19951 -14.68854 -14.49264 -13.96453 -13.67385 -13.50557 -13.30538 -13.06854 -12.26012 -11.98846 -11.77290 -11.74997 -11.65801 -11.42805 -11.09723 -10.82705 -10.67140 -9.93908 -9.03319 -5.03680 0.13450 0.24443 1.21790 1.53259 1.82343 1.90529 2.82140 3.12018 3.18253 3.30971 3.46638 3.62507 3.67423 3.74347 3.84628 3.88694 4.08731 4.17602 4.34593 4.47484 4.48473 4.54651 4.65767 4.69928 4.76439 4.85777 5.06385 5.07949 5.19616 5.40233 5.86719 6.08271 6.37689 6.48624 6.67115 7.36506 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.538 6.538 2 C -0.054 4.054 3 Si 0.675 3.325 4 C -0.247 4.247 5 C 0.224 3.776 6 N -0.569 5.569 7 C 0.570 3.430 8 N -0.678 5.678 9 C 0.136 3.864 10 H 0.110 0.890 11 C -0.139 4.139 12 C -0.113 4.113 13 H 0.096 0.904 14 C 0.084 3.916 15 O -0.574 6.574 16 C -0.145 4.145 17 N -0.560 5.560 18 C 0.201 3.799 19 H 0.381 0.619 20 H 0.078 0.922 21 H -0.252 1.252 22 H -0.257 1.257 23 H 0.169 0.831 24 H 0.415 0.585 25 H 0.100 0.900 26 H 0.078 0.922 27 H 0.048 0.952 28 H 0.047 0.953 29 H 0.380 0.620 30 H 0.071 0.929 31 H 0.092 0.908 32 H 0.167 0.833 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.187 0.814 0.968 4.374 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.345 6.345 2 C -0.165 4.165 3 Si 0.575 3.425 4 C -0.255 4.255 5 C 0.056 3.944 6 N -0.291 5.291 7 C 0.213 3.787 8 N -0.313 5.313 9 C 0.030 3.970 10 H 0.128 0.872 11 C -0.177 4.177 12 C -0.131 4.131 13 H 0.114 0.886 14 C 0.006 3.994 15 O -0.380 6.380 16 C -0.184 4.184 17 N -0.282 5.282 18 C 0.034 3.966 19 H 0.230 0.770 20 H 0.096 0.904 21 H -0.177 1.177 22 H -0.182 1.182 23 H 0.186 0.814 24 H 0.253 0.747 25 H 0.118 0.882 26 H 0.096 0.904 27 H 0.067 0.933 28 H 0.065 0.935 29 H 0.227 0.773 30 H 0.090 0.910 31 H 0.111 0.889 32 H 0.184 0.816 Dipole moment (debyes) X Y Z Total from point charges 4.236 0.916 0.016 4.334 hybrid contribution -1.304 -0.081 0.661 1.464 sum 2.932 0.835 0.677 3.123 Atomic orbital electron populations 1.86585 1.17899 1.80107 1.49932 1.24403 0.84290 1.10511 0.97278 0.95333 0.91518 0.74734 0.80884 1.20622 1.06954 0.97434 1.00478 1.22794 0.89978 0.90730 0.90873 1.67969 1.16060 1.39467 1.05587 1.19332 0.86865 0.85677 0.86806 1.43804 1.53582 1.14360 1.19569 1.21806 0.91463 0.95683 0.88060 0.87173 1.23362 0.97388 1.00736 0.96251 1.22663 0.98484 0.99167 0.92794 0.88568 1.22194 0.87777 0.99459 0.89929 1.86501 1.34566 1.96217 1.20668 1.23564 1.01696 0.96932 0.96166 1.67926 1.28507 1.08436 1.23287 1.22724 0.88898 0.98684 0.86319 0.77047 0.90362 1.17683 1.18174 0.81350 0.74728 0.88170 0.90363 0.93333 0.93497 0.77295 0.90982 0.88931 0.81619 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.23 12.76 -35.23 -0.45 -0.68 16 2 C -0.05 0.05 2.84 36.00 0.10 0.15 16 3 Si 0.67 -1.09 29.87 -169.99 -5.08 -6.17 16 4 C -0.25 -0.32 5.43 -104.35 -0.57 -0.88 16 5 C 0.22 0.50 10.92 -17.22 -0.19 0.31 16 6 N -0.57 -2.20 10.46 -13.93 -0.15 -2.34 16 7 C 0.57 2.02 8.43 -322.81 -2.72 -0.70 16 8 N -0.68 -0.98 5.41 -55.00 -0.30 -1.28 16 9 C 0.14 0.01 4.31 -67.12 -0.29 -0.28 16 10 H 0.11 0.06 7.40 -51.93 -0.38 -0.32 16 11 C -0.14 0.24 7.38 -25.92 -0.19 0.05 16 12 C -0.11 0.04 3.90 -89.67 -0.35 -0.31 16 13 H 0.10 0.07 8.14 -51.93 -0.42 -0.36 16 14 C 0.08 -0.05 6.89 37.15 0.26 0.20 16 15 O -0.57 -0.66 13.66 -35.23 -0.48 -1.14 16 16 C -0.14 -0.05 7.45 -25.78 -0.19 -0.24 16 17 N -0.56 -1.81 9.15 -13.93 -0.13 -1.94 16 18 C 0.20 0.31 9.92 -17.22 -0.17 0.13 16 19 H 0.38 -1.35 8.74 45.56 0.40 -0.95 16 20 H 0.08 -0.22 7.96 -51.93 -0.41 -0.63 16 21 H -0.25 -0.41 7.11 56.52 0.40 -0.01 16 22 H -0.26 -0.10 7.11 56.52 0.40 0.30 16 23 H 0.17 0.03 8.06 -52.49 -0.42 -0.39 16 24 H 0.41 0.22 8.82 -40.82 -0.36 -0.14 16 25 H 0.10 -0.29 8.10 -51.93 -0.42 -0.72 16 26 H 0.08 -0.15 8.14 -51.92 -0.42 -0.57 16 27 H 0.05 -0.08 7.85 -51.93 -0.41 -0.49 16 28 H 0.05 -0.07 8.14 -51.93 -0.42 -0.50 16 29 H 0.38 -1.17 9.12 45.56 0.42 -0.75 16 30 H 0.07 0.17 8.14 -51.93 -0.42 -0.25 16 31 H 0.09 -0.04 7.91 -51.93 -0.41 -0.45 16 32 H 0.17 -0.19 5.04 -52.49 -0.26 -0.46 16 LS Contribution 274.56 15.07 4.14 4.14 Total: 0.00 -7.76 274.56 -9.91 -17.67 By element: Atomic # 1 Polarization: -3.53 SS G_CDS: -3.16 Total: -6.69 kcal Atomic # 6 Polarization: 2.74 SS G_CDS: -4.31 Total: -1.57 kcal Atomic # 7 Polarization: -4.99 SS G_CDS: -0.57 Total: -5.56 kcal Atomic # 8 Polarization: -0.89 SS G_CDS: -0.93 Total: -1.82 kcal Atomic # 14 Polarization: -1.09 SS G_CDS: -5.08 Total: -6.17 kcal Total LS contribution 4.14 Total: 4.14 kcal Total: -7.76 -9.91 -17.67 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_13270476_12175864.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 27.425 kcal (2) G-P(sol) polarization free energy of solvation -7.759 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 19.666 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.910 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.669 kcal (6) G-S(sol) free energy of system = (1) + (5) 9.756 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.26 seconds