Wall clock time and date at job start Mon Mar 8 2021 05:19:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86305 * 109.47165 * 2 1 4 4 C 1.50708 * 109.47056 * 240.00165 * 2 1 3 5 5 C 1.33324 * 125.95139 * 300.01977 * 4 2 1 6 6 N 1.32119 * 114.58201 * 179.97438 * 5 4 2 7 7 C 1.29693 * 116.86173 * 359.97438 * 6 5 4 8 8 N 1.38611 * 124.94769 * 180.26352 * 7 6 5 9 9 C 1.46500 * 119.99873 * 359.69758 * 8 7 6 10 10 H 1.08996 * 112.85085 * 336.19112 * 9 8 7 11 11 C 1.53783 * 113.61448 * 107.50394 * 9 8 7 12 12 C 1.53775 * 87.08321 * 89.11518 * 11 9 8 13 13 H 1.09000 * 113.61503 * 270.88310 * 12 11 9 14 14 C 1.52997 * 113.69320 * 139.99023 * 12 11 9 15 15 O 1.42907 * 109.47176 * 87.46508 * 14 12 11 16 16 C 1.53784 * 113.61251 * 204.99960 * 9 8 7 17 17 S 1.70968 * 110.10264 * 359.97438 * 7 6 5 18 18 H 0.96706 * 113.99704 * 59.99956 * 1 2 3 19 19 H 1.08990 * 109.47265 * 120.00167 * 2 1 3 20 20 H 1.48501 * 109.99777 * 298.68414 * 3 2 1 21 21 H 1.48496 * 109.99448 * 60.00153 * 3 2 1 22 22 H 1.08002 * 122.71009 * 359.97438 * 5 4 2 23 23 H 0.97000 * 120.00159 * 179.69565 * 8 7 6 24 24 H 1.09001 * 113.61264 * 203.66632 * 11 9 8 25 25 H 1.08996 * 113.61284 * 334.56316 * 11 9 8 26 26 H 1.08998 * 109.47176 * 207.46388 * 14 12 11 27 27 H 1.09002 * 109.46974 * 327.46480 * 14 12 11 28 28 H 0.96697 * 114.00154 * 180.02562 * 15 14 12 29 29 H 1.08999 * 113.61664 * 25.43445 * 16 9 8 30 30 H 1.09000 * 113.61451 * 156.33604 * 16 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7565 0.0000 4 6 1.9314 -0.7104 -1.2306 5 6 1.6832 -1.9787 -1.5583 6 7 2.2374 -2.3721 -2.6913 7 6 2.9415 -1.4937 -3.3352 8 7 3.5901 -1.7234 -4.5385 9 6 3.5128 -3.0419 -5.1723 10 1 3.2982 -3.8408 -4.4625 11 6 2.6210 -3.0720 -6.4248 12 6 3.8761 -2.6991 -7.2312 13 1 4.0330 -1.6243 -7.3226 14 6 3.9869 -3.4315 -8.5699 15 8 3.2891 -2.6940 -9.5756 16 6 4.6971 -3.3478 -6.1043 17 16 2.9467 -0.0089 -2.4877 18 1 -0.3933 0.4417 -0.7651 19 1 1.7924 -0.5138 0.8899 20 1 1.5879 2.4586 -1.2242 21 1 1.5615 2.4678 1.2085 22 1 1.0780 -2.6318 -0.9470 23 1 4.0952 -1.0111 -4.9609 24 1 2.2300 -4.0623 -6.6586 25 1 1.8520 -2.2997 -6.4318 26 1 5.0367 -3.5223 -8.8486 27 1 3.5481 -4.4251 -8.4778 28 1 3.3171 -3.1010 -10.4523 29 1 5.6041 -2.7981 -5.8527 30 1 4.8737 -4.4134 -6.2506 There are 41 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 41 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_13270476_15704118.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 05:19:27 Heat of formation + Delta-G solvation = -2.087151 kcal Electronic energy + Delta-G solvation = -15130.638009 eV Core-core repulsion = 12441.382787 eV Total energy + Delta-G solvation = -2689.255222 eV No. of doubly occupied orbitals = 41 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 243.072 amu Computer time = 0.22 seconds Orbital eigenvalues (eV) -41.10664 -40.17522 -38.00545 -37.39650 -35.05529 -31.23958 -28.98697 -26.85213 -26.47238 -24.78574 -23.50744 -21.42413 -20.07087 -19.62540 -18.31938 -18.08918 -17.11491 -16.76966 -16.45986 -16.03485 -15.82207 -15.65486 -15.39773 -14.94031 -14.66395 -13.85639 -13.68472 -13.56552 -13.17840 -12.84137 -12.34923 -12.04565 -11.96403 -11.80762 -11.48655 -11.10610 -10.89811 -10.83467 -10.23690 -10.15955 -8.72627 -5.04668 -0.01453 0.04917 0.71418 1.26369 1.57217 1.91963 2.05020 2.10411 3.06198 3.34813 3.36996 3.55100 3.66404 3.76015 3.93929 4.04541 4.28471 4.42471 4.49172 4.55446 4.60189 4.64760 4.69130 4.77168 4.99392 5.01193 5.07133 5.30282 5.88054 6.05783 6.37184 6.62168 7.03153 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.526 6.526 2 C -0.017 4.017 3 Si 0.653 3.347 4 C -0.306 4.306 5 C 0.119 3.881 6 N -0.549 5.549 7 C 0.328 3.672 8 N -0.675 5.675 9 C 0.136 3.864 10 H 0.108 0.892 11 C -0.144 4.144 12 C -0.112 4.112 13 H 0.096 0.904 14 C 0.084 3.916 15 O -0.574 6.574 16 C -0.139 4.139 17 S 0.089 5.911 18 H 0.377 0.623 19 H 0.125 0.875 20 H -0.244 1.244 21 H -0.237 1.237 22 H 0.176 0.824 23 H 0.414 0.586 24 H 0.092 0.908 25 H 0.072 0.928 26 H 0.047 0.953 27 H 0.049 0.951 28 H 0.381 0.619 29 H 0.078 0.922 30 H 0.100 0.900 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.019 -0.635 -2.162 4.608 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.333 6.333 2 C -0.130 4.130 3 Si 0.553 3.447 4 C -0.428 4.428 5 C -0.032 4.032 6 N -0.274 5.274 7 C -0.042 4.042 8 N -0.314 5.314 9 C 0.028 3.972 10 H 0.126 0.874 11 C -0.183 4.183 12 C -0.131 4.131 13 H 0.114 0.886 14 C 0.006 3.994 15 O -0.380 6.380 16 C -0.178 4.178 17 S 0.338 5.662 18 H 0.225 0.775 19 H 0.143 0.857 20 H -0.168 1.168 21 H -0.161 1.161 22 H 0.193 0.807 23 H 0.252 0.748 24 H 0.111 0.889 25 H 0.091 0.909 26 H 0.065 0.935 27 H 0.067 0.933 28 H 0.228 0.772 29 H 0.097 0.903 30 H 0.118 0.882 Dipole moment (debyes) X Y Z Total from point charges 4.164 0.584 -1.553 4.483 hybrid contribution -1.173 -0.899 -0.802 1.681 sum 2.991 -0.314 -2.355 3.820 Atomic orbital electron populations 1.86615 1.17505 1.79908 1.49230 1.24071 0.83451 1.09766 0.95695 0.95224 0.91675 0.75284 0.82549 1.25524 1.13341 0.99268 1.04711 1.21333 0.97087 0.93072 0.91690 1.66484 1.16957 1.33574 1.10427 1.23711 0.95038 0.93412 0.92089 1.43702 1.54726 1.13987 1.18957 1.21860 0.96491 0.84850 0.93975 0.87411 1.23519 0.96947 1.02806 0.95078 1.22614 0.97332 1.00782 0.92358 0.88618 1.22193 0.95361 0.93982 0.87855 1.86492 1.77365 1.52751 1.21370 1.23378 0.97406 1.02389 0.94603 1.84000 1.51524 1.13451 1.17194 0.77533 0.85716 1.16787 1.16077 0.80682 0.74798 0.88949 0.90888 0.93470 0.93317 0.77234 0.90348 0.88186 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.72 12.87 -35.23 -0.45 -1.18 16 2 C -0.02 0.00 2.99 36.01 0.11 0.11 16 3 Si 0.65 -0.25 31.05 -169.99 -5.28 -5.53 16 4 C -0.31 -0.30 5.74 -36.02 -0.21 -0.51 16 5 C 0.12 0.26 11.22 -19.14 -0.21 0.04 16 6 N -0.55 -1.78 9.83 -15.21 -0.15 -1.93 16 7 C 0.33 0.53 8.09 -87.67 -0.71 -0.18 16 8 N -0.68 0.25 5.42 -54.99 -0.30 -0.05 16 9 C 0.14 -0.08 4.44 -67.12 -0.30 -0.38 16 10 H 0.11 0.08 7.67 -51.93 -0.40 -0.32 16 11 C -0.14 0.05 7.43 -25.92 -0.19 -0.15 16 12 C -0.11 0.13 3.88 -89.81 -0.35 -0.21 16 13 H 0.10 -0.06 8.14 -51.93 -0.42 -0.48 16 14 C 0.08 -0.10 6.89 37.16 0.26 0.15 16 15 O -0.57 -0.30 13.66 -35.23 -0.48 -0.78 16 16 C -0.14 0.34 7.39 -25.92 -0.19 0.14 16 17 S 0.09 0.03 20.57 -107.50 -2.21 -2.18 16 18 H 0.38 -0.44 8.70 45.56 0.40 -0.04 16 19 H 0.13 -0.11 7.96 -51.93 -0.41 -0.52 16 20 H -0.24 -0.39 7.11 56.52 0.40 0.01 16 21 H -0.24 -0.53 7.11 56.52 0.40 -0.13 16 22 H 0.18 0.18 8.06 -52.49 -0.42 -0.25 16 23 H 0.41 -0.94 8.83 -40.82 -0.36 -1.30 16 24 H 0.09 -0.07 7.90 -51.93 -0.41 -0.48 16 25 H 0.07 0.10 8.14 -51.93 -0.42 -0.32 16 26 H 0.05 -0.10 8.14 -51.93 -0.42 -0.52 16 27 H 0.05 -0.10 7.85 -51.93 -0.41 -0.51 16 28 H 0.38 -1.37 9.12 45.56 0.42 -0.95 16 29 H 0.08 -0.22 8.14 -51.93 -0.42 -0.64 16 30 H 0.10 -0.32 8.10 -51.93 -0.42 -0.74 16 LS Contribution 272.44 15.07 4.11 4.11 Total: 0.00 -6.26 272.44 -9.47 -15.73 By element: Atomic # 1 Polarization: -4.29 SS G_CDS: -2.91 Total: -7.20 kcal Atomic # 6 Polarization: 0.81 SS G_CDS: -1.80 Total: -0.99 kcal Atomic # 7 Polarization: -1.53 SS G_CDS: -0.45 Total: -1.98 kcal Atomic # 8 Polarization: -1.02 SS G_CDS: -0.93 Total: -1.95 kcal Atomic # 14 Polarization: -0.25 SS G_CDS: -5.28 Total: -5.53 kcal Atomic # 16 Polarization: 0.03 SS G_CDS: -2.21 Total: -2.18 kcal Total LS contribution 4.11 Total: 4.11 kcal Total: -6.26 -9.47 -15.73 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_13270476_15704118.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 13.643 kcal (2) G-P(sol) polarization free energy of solvation -6.255 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 7.387 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.475 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.730 kcal (6) G-S(sol) free energy of system = (1) + (5) -2.087 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.22 seconds