Wall clock time and date at job start Mon Mar 8 2021 05:19:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86299 * 109.46966 * 2 1 4 4 C 1.50700 * 109.46935 * 119.99959 * 2 1 3 5 5 C 1.37980 * 120.32692 * 244.99553 * 4 2 1 6 6 N 1.32009 * 120.90323 * 179.97438 * 5 4 2 7 7 C 1.32340 * 121.64386 * 0.02562 * 6 5 4 8 8 N 1.39145 * 119.71542 * 179.97438 * 7 6 5 9 9 C 1.46498 * 120.00239 * 359.71915 * 8 7 6 10 10 H 1.09006 * 112.85058 * 23.81066 * 9 8 7 11 11 C 1.53784 * 113.61676 * 155.00055 * 9 8 7 12 12 C 1.53784 * 87.07744 * 89.11905 * 11 9 8 13 13 H 1.08997 * 113.61635 * 270.80023 * 12 11 9 14 14 C 1.53003 * 113.60985 * 139.98430 * 12 11 9 15 15 O 1.42906 * 109.46901 * 175.00018 * 14 12 11 16 16 C 1.53773 * 87.08163 * 25.43423 * 12 11 9 17 17 C 1.39344 * 120.56448 * 0.25402 * 7 6 5 18 18 F 1.35104 * 120.46930 * 179.72542 * 17 7 6 19 19 C 1.38441 * 119.05394 * 359.49100 * 17 7 6 20 20 H 0.96697 * 113.99928 * 299.99975 * 1 2 3 21 21 H 1.08997 * 109.46851 * 239.99488 * 2 1 3 22 22 H 1.48503 * 109.99587 * 178.67895 * 3 2 1 23 23 H 1.48497 * 110.00157 * 299.99938 * 3 2 1 24 24 H 1.08001 * 119.54815 * 0.02562 * 5 4 2 25 25 H 0.97005 * 119.99811 * 179.97438 * 8 7 6 26 26 H 1.08993 * 113.61464 * 203.66599 * 11 9 8 27 27 H 1.08999 * 113.61239 * 334.49248 * 11 9 8 28 28 H 1.08999 * 109.47296 * 294.99288 * 14 12 11 29 29 H 1.08999 * 109.47013 * 55.00139 * 14 12 11 30 30 H 0.96695 * 113.99774 * 179.97438 * 15 14 12 31 31 H 1.09005 * 113.61643 * 220.01654 * 16 12 11 32 32 H 1.09006 * 113.61773 * 89.11564 * 16 12 11 33 33 H 1.08005 * 120.75486 * 180.24348 * 19 17 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 2.6381 -0.0202 2.1937 6 7 3.0830 -0.6310 3.2762 7 6 2.8719 -1.9212 3.4816 8 7 3.3595 -2.5245 4.6368 9 6 4.1081 -1.7333 5.6164 10 1 3.8780 -0.6690 5.5656 11 6 4.0552 -2.3075 7.0420 12 6 5.3020 -3.1286 6.6730 13 1 5.0715 -4.0994 6.2343 14 6 6.3339 -3.2155 7.7993 15 8 7.3950 -4.0886 7.4068 16 6 5.6150 -2.0395 5.6335 17 6 2.1707 -2.6819 2.5482 18 9 1.9611 -4.0001 2.7572 19 6 1.6876 -2.0666 1.4060 20 1 -0.3933 0.4417 0.7650 21 1 1.7923 -0.5139 -0.8899 22 1 3.5346 1.7702 0.0322 23 1 1.5615 2.4679 -1.2085 24 1 2.8294 1.0344 2.0606 25 1 3.2069 -3.4699 4.7917 26 1 4.2358 -1.5647 7.8189 27 1 3.1716 -2.9159 7.2351 28 1 6.7362 -2.2228 8.0010 29 1 5.8576 -3.6044 8.6993 30 1 8.0873 -4.1910 8.0741 31 1 5.9914 -2.4326 4.6890 32 1 6.2221 -1.2233 6.0254 33 1 1.1371 -2.6291 0.6664 There are 46 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 46 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_13270476_17656566.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 05:19:33 Heat of formation + Delta-G solvation = -54.205031 kcal Electronic energy + Delta-G solvation = -18695.864096 eV Core-core repulsion = 15445.742651 eV Total energy + Delta-G solvation = -3250.121445 eV No. of doubly occupied orbitals = 46 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 255.106 amu Computer time = 0.29 seconds Orbital eigenvalues (eV) -49.85812 -41.53282 -40.45916 -38.04307 -37.35809 -35.29187 -33.18543 -31.33663 -28.82347 -26.80645 -26.40534 -25.16021 -23.25293 -22.94563 -20.44258 -19.43809 -18.47922 -18.32536 -18.14544 -17.51334 -16.96388 -16.63619 -16.28908 -16.02448 -15.79032 -15.61330 -15.36008 -14.98438 -14.51678 -14.31860 -14.01630 -13.65206 -13.58790 -13.44090 -13.06376 -12.61289 -12.11447 -11.97600 -11.80379 -11.44856 -11.15481 -10.86016 -10.69466 -10.63984 -10.45540 -8.77001 -5.09240 -0.06569 0.12144 1.22442 1.58824 1.91370 1.93780 2.54902 3.04452 3.09657 3.22318 3.40843 3.45961 3.58824 3.60258 3.79603 3.83399 3.97244 4.05754 4.31506 4.39738 4.42996 4.47111 4.52845 4.63463 4.66726 4.70726 4.78938 4.97435 5.03938 5.04629 5.20663 5.44561 5.97740 6.17089 6.52505 6.64346 6.95071 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.540 6.540 2 C -0.055 4.055 3 Si 0.684 3.316 4 C -0.210 4.210 5 C 0.149 3.851 6 N -0.511 5.511 7 C 0.393 3.607 8 N -0.699 5.699 9 C 0.133 3.867 10 H 0.111 0.889 11 C -0.141 4.141 12 C -0.113 4.113 13 H 0.095 0.905 14 C 0.084 3.916 15 O -0.574 6.574 16 C -0.145 4.145 17 C -0.020 4.020 18 F -0.133 7.133 19 C -0.037 4.037 20 H 0.380 0.620 21 H 0.115 0.885 22 H -0.254 1.254 23 H -0.251 1.251 24 H 0.163 0.837 25 H 0.413 0.587 26 H 0.099 0.901 27 H 0.076 0.924 28 H 0.049 0.951 29 H 0.047 0.953 30 H 0.380 0.620 31 H 0.071 0.929 32 H 0.092 0.908 33 H 0.149 0.851 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.148 2.651 3.955 4.763 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.346 6.346 2 C -0.166 4.166 3 Si 0.586 3.414 4 C -0.215 4.215 5 C -0.008 4.008 6 N -0.227 5.227 7 C 0.155 3.845 8 N -0.331 5.331 9 C 0.027 3.973 10 H 0.128 0.872 11 C -0.179 4.179 12 C -0.131 4.131 13 H 0.113 0.887 14 C 0.006 3.994 15 O -0.380 6.380 16 C -0.184 4.184 17 C -0.047 4.047 18 F -0.112 7.112 19 C -0.063 4.063 20 H 0.227 0.773 21 H 0.133 0.867 22 H -0.178 1.178 23 H -0.176 1.176 24 H 0.180 0.820 25 H 0.250 0.750 26 H 0.117 0.883 27 H 0.095 0.905 28 H 0.067 0.933 29 H 0.065 0.935 30 H 0.227 0.773 31 H 0.090 0.910 32 H 0.110 0.890 33 H 0.167 0.833 Dipole moment (debyes) X Y Z Total from point charges 0.611 3.430 3.202 4.732 hybrid contribution -0.077 -1.797 -0.127 1.803 sum 0.534 1.633 3.075 3.523 Atomic orbital electron populations 1.86515 1.17069 1.81681 1.49289 1.24862 0.85227 1.09929 0.96621 0.94898 0.81183 0.77581 0.87770 1.20932 1.05750 0.94660 1.00202 1.22318 0.91647 0.99217 0.87620 1.67282 1.24808 1.07306 1.23338 1.18392 0.90311 0.88960 0.86825 1.44244 1.58389 1.11878 1.18604 1.21795 0.91418 0.96791 0.87278 0.87153 1.23372 0.97815 0.99918 0.96791 1.22609 0.94899 0.99120 0.96500 0.88675 1.22198 0.87931 0.92950 0.96283 1.86497 1.35828 1.68682 1.46957 1.23517 0.96569 0.98565 0.99731 1.17999 1.08772 0.79469 0.98421 1.91496 1.93728 1.31061 1.94944 1.21285 0.95493 0.94445 0.95105 0.77299 0.86747 1.17843 1.17589 0.81996 0.74999 0.88267 0.90486 0.93323 0.93516 0.77275 0.91006 0.88983 0.83303 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.25 12.84 -35.23 -0.45 -0.21 16 2 C -0.05 0.05 2.82 36.01 0.10 0.16 16 3 Si 0.68 -1.30 29.83 -169.99 -5.07 -6.37 16 4 C -0.21 0.03 5.36 -104.47 -0.56 -0.53 16 5 C 0.15 -0.01 9.84 -17.57 -0.17 -0.19 16 6 N -0.51 -0.86 9.13 -12.36 -0.11 -0.98 16 7 C 0.39 0.73 7.49 -154.85 -1.16 -0.43 16 8 N -0.70 -0.33 5.41 -53.06 -0.29 -0.62 16 9 C 0.13 -0.06 4.36 -67.12 -0.29 -0.36 16 10 H 0.11 0.00 7.40 -51.93 -0.38 -0.38 16 11 C -0.14 0.27 7.39 -25.92 -0.19 0.08 16 12 C -0.11 0.07 3.88 -89.81 -0.35 -0.28 16 13 H 0.10 0.04 8.14 -51.93 -0.42 -0.38 16 14 C 0.08 -0.07 6.88 37.16 0.26 0.19 16 15 O -0.57 -0.52 13.66 -35.23 -0.48 -1.01 16 16 C -0.14 0.02 7.43 -25.92 -0.19 -0.18 16 17 C -0.02 -0.04 7.35 -39.10 -0.29 -0.33 16 18 F -0.13 -0.35 16.65 2.25 0.04 -0.31 16 19 C -0.04 -0.03 9.82 -39.26 -0.39 -0.42 16 20 H 0.38 -1.63 8.70 45.56 0.40 -1.24 16 21 H 0.12 -0.07 7.96 -51.93 -0.41 -0.49 16 22 H -0.25 -0.12 7.11 56.52 0.40 0.29 16 23 H -0.25 -0.36 7.11 56.52 0.40 0.04 16 24 H 0.16 -0.42 4.91 -52.49 -0.26 -0.68 16 25 H 0.41 -0.12 8.17 -40.82 -0.33 -0.45 16 26 H 0.10 -0.30 8.10 -51.93 -0.42 -0.72 16 27 H 0.08 -0.15 8.14 -51.93 -0.42 -0.58 16 28 H 0.05 -0.09 7.84 -51.93 -0.41 -0.50 16 29 H 0.05 -0.08 8.14 -51.93 -0.42 -0.50 16 30 H 0.38 -1.25 9.12 45.56 0.42 -0.83 16 31 H 0.07 0.12 8.14 -51.93 -0.42 -0.30 16 32 H 0.09 -0.08 7.90 -51.93 -0.41 -0.49 16 33 H 0.15 0.00 8.06 -52.48 -0.42 -0.42 16 LS Contribution 285.08 15.07 4.30 4.30 Total: 0.00 -6.68 285.08 -8.43 -15.11 By element: Atomic # 1 Polarization: -4.51 SS G_CDS: -3.13 Total: -7.63 kcal Atomic # 6 Polarization: 0.95 SS G_CDS: -3.23 Total: -2.28 kcal Atomic # 7 Polarization: -1.19 SS G_CDS: -0.40 Total: -1.59 kcal Atomic # 8 Polarization: -0.28 SS G_CDS: -0.93 Total: -1.21 kcal Atomic # 9 Polarization: -0.35 SS G_CDS: 0.04 Total: -0.31 kcal Atomic # 14 Polarization: -1.30 SS G_CDS: -5.07 Total: -6.37 kcal Total LS contribution 4.30 Total: 4.30 kcal Total: -6.68 -8.43 -15.11 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_13270476_17656566.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -39.099 kcal (2) G-P(sol) polarization free energy of solvation -6.675 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -45.774 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.431 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.106 kcal (6) G-S(sol) free energy of system = (1) + (5) -54.205 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.29 seconds