Wall clock time and date at job start Mon Mar 8 2021 05:19:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42899 * 1 3 3 Si 1.86299 * 109.46982 * 2 1 4 4 C 1.50700 * 109.47436 * 239.99514 * 2 1 3 5 5 C 1.38605 * 120.72082 * 300.00543 * 4 2 1 6 6 N 1.32277 * 119.19521 * 179.97438 * 5 4 2 7 7 C 1.32495 * 120.74091 * 359.97438 * 6 5 4 8 8 N 1.38406 * 119.21633 * 180.02562 * 7 6 5 9 9 C 1.46496 * 120.00029 * 180.02562 * 8 7 6 10 10 H 1.09004 * 112.84889 * 336.20059 * 9 8 7 11 11 C 1.53957 * 113.66891 * 107.43961 * 9 8 7 12 12 C 1.53781 * 87.01759 * 139.93434 * 11 9 8 13 13 C 1.53002 * 113.61645 * 89.23307 * 12 11 9 14 14 O 1.42897 * 109.47001 * 80.85861 * 13 12 11 15 15 C 1.50706 * 113.61383 * 220.05254 * 12 11 9 16 16 C 1.38233 * 120.00109 * 98.86122 * 15 12 11 17 17 C 1.38238 * 119.99754 * 179.76611 * 16 15 12 18 18 C 1.38234 * 120.00016 * 0.50732 * 17 16 15 19 19 C 1.38238 * 120.00063 * 359.74632 * 18 17 16 20 20 C 1.38235 * 120.00108 * 0.02562 * 19 18 17 21 21 C 1.53783 * 113.61536 * 205.00466 * 9 8 7 22 22 N 1.32496 * 121.56571 * 0.28791 * 7 6 5 23 23 C 1.32279 * 120.73990 * 359.43467 * 22 7 6 24 24 H 0.96695 * 114.00023 * 60.00671 * 1 2 3 25 25 H 1.09008 * 109.46719 * 119.99660 * 2 1 3 26 26 H 1.48499 * 110.00198 * 60.00019 * 3 2 1 27 27 H 1.48498 * 109.99922 * 181.31719 * 3 2 1 28 28 H 1.07999 * 120.39937 * 359.97438 * 5 4 2 29 29 H 0.97001 * 119.99821 * 0.02562 * 8 7 6 30 30 H 1.08998 * 113.61028 * 25.41420 * 11 9 8 31 31 H 1.08993 * 113.66971 * 254.46028 * 11 9 8 32 32 H 1.08999 * 109.47105 * 200.86347 * 13 12 11 33 33 H 1.09000 * 109.46611 * 320.86221 * 13 12 11 34 34 H 0.96702 * 114.00077 * 180.02562 * 14 13 12 35 35 H 1.08004 * 119.99934 * 0.02562 * 16 15 12 36 36 H 1.07999 * 119.99924 * 180.23621 * 17 16 15 37 37 H 1.08001 * 120.00318 * 179.72031 * 18 17 16 38 38 H 1.08000 * 120.00578 * 179.97438 * 19 18 17 39 39 H 1.07999 * 120.00165 * 179.97438 * 20 19 18 40 40 H 1.08997 * 113.61737 * 105.46721 * 21 9 8 41 41 H 1.08998 * 113.68520 * 334.57240 * 21 9 8 42 42 H 1.07999 * 120.40158 * 180.30154 * 23 22 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9314 -0.7105 -1.2304 5 6 1.6057 -2.0372 -1.4645 6 7 2.0627 -2.6312 -2.5545 7 6 2.8227 -1.9721 -3.4168 8 7 3.2833 -2.6243 -4.5474 9 6 4.1251 -1.9123 -5.5119 10 1 3.9891 -0.8314 -5.4756 11 6 5.6012 -2.3493 -5.4849 12 6 5.5755 -2.2488 -7.0192 13 6 5.9432 -0.8612 -7.5488 14 8 7.3647 -0.7161 -7.5577 15 6 6.3283 -3.3570 -7.7094 16 6 5.6442 -4.4461 -8.2162 17 6 6.3343 -5.4602 -8.8535 18 6 7.7096 -5.3903 -8.9749 19 6 8.3942 -4.3037 -8.4635 20 6 7.7037 -3.2873 -7.8303 21 6 4.0597 -2.4939 -6.9340 22 7 3.1564 -0.7051 -3.2200 23 6 2.7282 -0.0510 -2.1530 24 1 -0.3933 0.4416 -0.7651 25 1 1.7923 -0.5138 0.8901 26 1 1.5614 2.4679 1.2085 27 1 3.5345 1.7703 -0.0321 28 1 0.9863 -2.5795 -0.7654 29 1 3.0486 -3.5529 -4.7010 30 1 5.7493 -3.3642 -5.1162 31 1 6.2634 -1.6248 -5.0109 32 1 5.5597 -0.7460 -8.5626 33 1 5.5042 -0.0988 -6.9054 34 1 7.6705 0.1420 -7.8822 35 1 4.5702 -4.5026 -8.1178 36 1 5.7995 -6.3093 -9.2528 37 1 8.2492 -6.1848 -9.4688 38 1 9.4687 -4.2492 -8.5578 39 1 8.2386 -2.4386 -7.4304 40 1 3.4794 -1.8861 -7.6281 41 1 3.7857 -3.5485 -6.9636 42 1 2.9996 0.9832 -2.0005 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_13270512_12175864.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 05:19:36 Heat of formation + Delta-G solvation = 43.724670 kcal Electronic energy + Delta-G solvation = -25460.665941 eV Core-core repulsion = 21794.839311 eV Total energy + Delta-G solvation = -3665.826630 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 314.142 amu Computer time = 0.58 seconds Orbital eigenvalues (eV) -42.17828 -41.54387 -39.16409 -38.10758 -37.40280 -35.61032 -34.67501 -32.55575 -31.69011 -31.31569 -28.36978 -27.01261 -26.54232 -25.89869 -24.54876 -23.32262 -23.10773 -22.13861 -19.96110 -19.26489 -18.93381 -18.38087 -18.06040 -17.57681 -16.73383 -16.58489 -16.32179 -16.05493 -15.85109 -15.75842 -15.55636 -15.46488 -15.29055 -14.58421 -14.49687 -14.19005 -14.05626 -13.64333 -13.50165 -13.35549 -13.24375 -13.12371 -12.40515 -12.28369 -12.18595 -11.90669 -11.81859 -11.75487 -11.65137 -11.40766 -11.15811 -10.83503 -10.58084 -10.00594 -9.67989 -9.48945 -9.06939 -5.12490 0.07346 0.17215 0.54342 0.65247 1.21710 1.54540 1.82346 1.91275 2.79624 2.85502 3.06229 3.14497 3.39148 3.40211 3.47740 3.61562 3.68438 3.71691 3.76747 3.86407 3.95176 4.16547 4.21103 4.23931 4.34234 4.38516 4.43184 4.48769 4.53054 4.62288 4.69776 4.72658 4.76790 4.87903 4.97365 4.99830 5.06684 5.20906 5.33017 5.36133 5.70090 5.79735 5.80627 5.86065 6.01283 6.24108 6.41958 6.50570 6.62159 7.30378 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.541 6.541 2 C -0.046 4.046 3 Si 0.682 3.318 4 C -0.295 4.295 5 C 0.223 3.777 6 N -0.570 5.570 7 C 0.568 3.432 8 N -0.683 5.683 9 C 0.139 3.861 10 H 0.122 0.878 11 C -0.133 4.133 12 C -0.038 4.038 13 C 0.101 3.899 14 O -0.563 6.563 15 C -0.068 4.068 16 C -0.123 4.123 17 C -0.125 4.125 18 C -0.123 4.123 19 C -0.127 4.127 20 C -0.095 4.095 21 C -0.138 4.138 22 N -0.562 5.562 23 C 0.199 3.801 24 H 0.379 0.621 25 H 0.116 0.884 26 H -0.251 1.251 27 H -0.255 1.255 28 H 0.170 0.830 29 H 0.415 0.585 30 H 0.087 0.913 31 H 0.079 0.921 32 H 0.052 0.948 33 H 0.055 0.945 34 H 0.379 0.621 35 H 0.122 0.878 36 H 0.120 0.880 37 H 0.119 0.881 38 H 0.119 0.881 39 H 0.145 0.855 40 H 0.082 0.918 41 H 0.099 0.901 42 H 0.166 0.834 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.961 3.155 -2.664 4.240 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.346 6.346 2 C -0.158 4.158 3 Si 0.583 3.417 4 C -0.304 4.304 5 C 0.055 3.945 6 N -0.291 5.291 7 C 0.212 3.788 8 N -0.318 5.318 9 C 0.033 3.967 10 H 0.140 0.860 11 C -0.172 4.172 12 C -0.038 4.038 13 C 0.023 3.977 14 O -0.370 6.370 15 C -0.068 4.068 16 C -0.141 4.141 17 C -0.143 4.143 18 C -0.141 4.141 19 C -0.145 4.145 20 C -0.113 4.113 21 C -0.176 4.176 22 N -0.284 5.284 23 C 0.031 3.969 24 H 0.226 0.774 25 H 0.133 0.867 26 H -0.175 1.175 27 H -0.180 1.180 28 H 0.187 0.813 29 H 0.253 0.747 30 H 0.105 0.895 31 H 0.098 0.902 32 H 0.070 0.930 33 H 0.073 0.927 34 H 0.227 0.773 35 H 0.140 0.860 36 H 0.138 0.862 37 H 0.137 0.863 38 H 0.137 0.863 39 H 0.162 0.838 40 H 0.101 0.899 41 H 0.117 0.883 42 H 0.183 0.817 Dipole moment (debyes) X Y Z Total from point charges 0.034 2.446 -2.424 3.444 hybrid contribution -0.245 -0.140 0.570 0.636 sum -0.211 2.306 -1.855 2.966 Atomic orbital electron populations 1.86507 1.17147 1.81637 1.49282 1.24700 0.85096 1.09599 0.96437 0.94980 0.80995 0.77806 0.87874 1.21707 1.08094 0.98506 1.02045 1.22834 0.90219 0.90569 0.90859 1.68004 1.16163 1.39254 1.05682 1.19433 0.86653 0.85646 0.87103 1.44199 1.53644 1.14416 1.19575 1.22625 0.89265 0.98199 0.86571 0.85999 1.23596 0.96757 1.02919 0.93938 1.20493 0.94469 0.93207 0.95679 1.21883 0.81967 0.94276 0.99524 1.86466 1.21073 1.40152 1.89304 1.19402 0.93822 0.94606 0.98964 1.21131 0.99847 0.94121 0.98997 1.21107 0.94516 0.98870 0.99831 1.21200 0.94568 0.98349 0.99992 1.21251 0.99981 0.94416 0.98860 1.21478 0.93835 0.98468 0.97522 1.23573 0.94809 1.02867 0.96384 1.67890 1.28099 1.08594 1.23848 1.22783 0.88508 0.98773 0.86848 0.77366 0.86717 1.17534 1.18005 0.81268 0.74713 0.89463 0.90211 0.92995 0.92703 0.77308 0.86045 0.86242 0.86338 0.86253 0.83781 0.89889 0.88286 0.81740 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.46 12.79 -35.23 -0.45 0.01 16 2 C -0.05 0.06 2.85 36.01 0.10 0.16 16 3 Si 0.68 -1.40 29.87 -169.99 -5.08 -6.47 16 4 C -0.30 0.05 5.40 -104.35 -0.56 -0.51 16 5 C 0.22 0.24 10.92 -17.22 -0.19 0.05 16 6 N -0.57 -1.59 10.46 -13.93 -0.15 -1.73 16 7 C 0.57 1.37 8.43 -322.80 -2.72 -1.35 16 8 N -0.68 -0.29 5.51 -54.91 -0.30 -0.59 16 9 C 0.14 -0.11 3.90 -67.03 -0.26 -0.37 16 10 H 0.12 -0.04 6.87 -51.93 -0.36 -0.40 16 11 C -0.13 0.00 7.01 -25.83 -0.18 -0.19 16 12 C -0.04 0.02 1.04 -154.84 -0.16 -0.14 16 13 C 0.10 -0.15 6.36 37.16 0.24 0.09 16 14 O -0.56 0.54 10.19 -35.23 -0.36 0.18 16 15 C -0.07 -0.09 5.02 -104.62 -0.53 -0.62 16 16 C -0.12 -0.13 9.19 -39.58 -0.36 -0.50 16 17 C -0.13 -0.17 10.05 -39.58 -0.40 -0.57 16 18 C -0.12 -0.21 10.05 -39.58 -0.40 -0.61 16 19 C -0.13 -0.25 10.05 -39.58 -0.40 -0.65 16 20 C -0.10 -0.21 8.85 -39.58 -0.35 -0.56 16 21 C -0.14 0.26 6.42 -25.92 -0.17 0.09 16 22 N -0.56 -1.12 9.13 -13.93 -0.13 -1.24 16 23 C 0.20 0.03 9.92 -17.22 -0.17 -0.15 16 24 H 0.38 -1.70 8.70 45.56 0.40 -1.31 16 25 H 0.12 -0.11 7.96 -51.92 -0.41 -0.53 16 26 H -0.25 -0.33 7.11 56.52 0.40 0.07 16 27 H -0.26 -0.06 7.11 56.52 0.40 0.34 16 28 H 0.17 -0.10 8.06 -52.49 -0.42 -0.52 16 29 H 0.41 -0.22 8.84 -40.82 -0.36 -0.58 16 30 H 0.09 0.09 8.09 -51.93 -0.42 -0.33 16 31 H 0.08 0.07 8.10 -51.93 -0.42 -0.35 16 32 H 0.05 -0.10 8.14 -51.93 -0.42 -0.52 16 33 H 0.05 -0.14 7.34 -51.93 -0.38 -0.52 16 34 H 0.38 -1.79 9.12 45.56 0.42 -1.37 16 35 H 0.12 -0.10 5.79 -52.48 -0.30 -0.40 16 36 H 0.12 -0.03 8.06 -52.49 -0.42 -0.46 16 37 H 0.12 0.01 8.06 -52.49 -0.42 -0.41 16 38 H 0.12 0.06 8.06 -52.49 -0.42 -0.36 16 39 H 0.14 0.31 5.57 -52.49 -0.29 0.02 16 40 H 0.08 -0.21 8.10 -51.93 -0.42 -0.63 16 41 H 0.10 -0.22 5.96 -51.93 -0.31 -0.53 16 42 H 0.17 -0.40 5.04 -52.49 -0.26 -0.66 16 LS Contribution 343.47 15.07 5.18 5.18 Total: 0.00 -7.70 343.47 -12.24 -19.93 By element: Atomic # 1 Polarization: -5.01 SS G_CDS: -4.44 Total: -9.45 kcal Atomic # 6 Polarization: 0.70 SS G_CDS: -6.51 Total: -5.81 kcal Atomic # 7 Polarization: -2.99 SS G_CDS: -0.58 Total: -3.57 kcal Atomic # 8 Polarization: 1.00 SS G_CDS: -0.81 Total: 0.19 kcal Atomic # 14 Polarization: -1.40 SS G_CDS: -5.08 Total: -6.47 kcal Total LS contribution 5.18 Total: 5.18 kcal Total: -7.70 -12.24 -19.93 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_13270512_12175864.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 63.659 kcal (2) G-P(sol) polarization free energy of solvation -7.699 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 55.960 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.236 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.934 kcal (6) G-S(sol) free energy of system = (1) + (5) 43.725 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.58 seconds