Wall clock time and date at job start Mon Mar 8 2021 05:10:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86305 * 109.46932 * 2 1 4 4 C 1.50697 * 109.47272 * 119.99663 * 2 1 3 5 5 C 1.38609 * 120.71876 * 65.00107 * 4 2 1 6 6 N 1.32277 * 119.19821 * 180.02562 * 5 4 2 7 7 C 1.32504 * 120.73849 * 359.97438 * 6 5 4 8 8 N 1.38409 * 119.21341 * 180.02562 * 7 6 5 9 9 C 1.46496 * 119.99536 * 180.02562 * 8 7 6 10 10 H 1.09001 * 112.85032 * 336.19722 * 9 8 7 11 11 C 1.53782 * 113.68971 * 107.46250 * 9 8 7 12 12 C 1.53962 * 87.11063 * 89.19569 * 11 9 8 13 13 H 1.08993 * 113.61598 * 270.84305 * 12 11 9 14 14 C 1.50700 * 113.66521 * 139.88647 * 12 11 9 15 15 C 1.38187 * 119.98859 * 322.28110 * 14 12 11 16 16 C 1.38236 * 120.04460 * 179.72381 * 15 14 12 17 17 C 1.38444 * 120.02548 * 0.54885 * 16 15 14 18 18 F 1.35101 * 120.00984 * 179.74830 * 17 16 15 19 19 C 1.38434 * 119.97895 * 359.72321 * 17 16 15 20 20 C 1.38398 * 119.94874 * 0.02562 * 19 17 16 21 21 F 1.35099 * 120.01483 * 179.97438 * 20 19 17 22 22 C 1.53781 * 113.61266 * 204.99825 * 9 8 7 23 23 N 1.32490 * 121.56591 * 0.27544 * 7 6 5 24 24 C 1.32280 * 120.73896 * 359.44635 * 23 7 6 25 25 H 0.96704 * 113.99881 * 300.00153 * 1 2 3 26 26 H 1.08994 * 109.47472 * 240.00090 * 2 1 3 27 27 H 1.48499 * 109.99975 * 178.68187 * 3 2 1 28 28 H 1.48497 * 109.99947 * 299.99616 * 3 2 1 29 29 H 1.07999 * 120.39963 * 0.04200 * 5 4 2 30 30 H 0.97001 * 119.99776 * 359.97438 * 8 7 6 31 31 H 1.08997 * 113.61668 * 203.67120 * 11 9 8 32 32 H 1.08998 * 113.61674 * 334.49629 * 11 9 8 33 33 H 1.07997 * 119.97552 * 359.97438 * 15 14 12 34 34 H 1.08004 * 119.98235 * 180.25310 * 16 15 14 35 35 H 1.08005 * 120.02489 * 180.02562 * 19 17 16 36 36 H 1.09002 * 113.61445 * 25.35018 * 22 9 8 37 37 H 1.09002 * 113.61408 * 156.16749 * 22 9 8 38 38 H 1.08000 * 120.40241 * 180.29891 * 24 23 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7103 1.2305 5 6 1.6926 -2.0633 1.4141 6 7 2.1469 -2.6564 2.5056 7 6 2.8233 -1.9721 3.4166 8 7 3.2847 -2.6246 4.5467 9 6 4.0338 -1.8846 5.5652 10 1 4.5144 -0.9895 5.1701 11 6 3.2396 -1.6374 6.8586 12 6 3.7886 -2.9853 7.3609 13 1 3.1630 -3.8376 7.0960 14 6 4.1798 -2.9746 8.8162 15 6 4.7759 -1.8542 9.3630 16 6 5.1300 -1.8410 10.6991 17 6 4.8981 -2.9546 11.4883 18 9 5.2489 -2.9432 12.7929 19 6 4.3060 -4.0796 10.9403 20 6 3.9472 -4.0899 9.6037 21 9 3.3698 -5.1872 9.0674 22 6 4.9723 -2.7687 6.4033 23 7 3.0643 -0.6772 3.2738 24 6 2.6425 -0.0250 2.2030 25 1 -0.3933 0.4417 0.7651 26 1 1.7924 -0.5138 -0.8899 27 1 3.5345 1.7704 0.0321 28 1 1.5615 2.4679 -1.2085 29 1 1.1425 -2.6264 0.6747 30 1 3.1113 -3.5717 4.6647 31 1 3.5950 -0.7817 7.4325 32 1 2.1594 -1.6304 6.7132 33 1 4.9616 -0.9869 8.7469 34 1 5.5922 -0.9633 11.1264 35 1 4.1243 -4.9486 11.5554 36 1 5.2908 -3.6763 5.8905 37 1 5.8022 -2.2223 6.8515 38 1 2.8461 1.0295 2.0898 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_27_13428182_12175864.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 05:10:39 Heat of formation + Delta-G solvation = 2.804895 kcal Electronic energy + Delta-G solvation = -25396.240560 eV Core-core repulsion = 21263.951375 eV Total energy + Delta-G solvation = -4132.289185 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 320.108 amu Computer time = 0.60 seconds Orbital eigenvalues (eV) -50.09130 -50.04350 -42.15452 -41.05488 -39.13142 -37.93130 -35.50655 -34.72767 -32.49726 -31.81497 -31.11499 -26.93882 -26.70742 -26.09462 -25.54453 -24.23930 -23.30125 -22.76136 -20.38405 -19.63223 -19.24826 -18.52297 -18.23719 -17.96514 -17.13074 -17.05913 -16.77888 -16.55107 -16.38267 -16.33379 -16.03653 -15.74607 -15.55127 -15.46622 -15.18355 -14.89416 -14.55932 -14.08106 -14.04325 -13.76904 -13.53534 -13.44928 -13.12893 -12.93286 -12.55438 -12.24658 -12.02117 -11.91577 -11.89741 -11.76542 -11.31202 -11.12931 -10.53030 -10.10322 -10.03170 -9.60245 -9.10595 -4.97537 -0.12486 -0.03277 0.05276 0.13538 1.33989 1.66643 1.78598 2.01626 2.28615 2.78243 2.82372 3.14660 3.31951 3.45825 3.49407 3.56439 3.64608 3.67504 3.69545 3.72783 3.80944 3.88750 3.95710 4.08983 4.19562 4.24803 4.57077 4.62609 4.70294 4.74933 4.76616 4.84702 4.85619 4.91802 4.94394 5.03283 5.09018 5.11208 5.26888 5.40568 5.72926 5.80557 6.04199 6.38435 6.80066 7.26004 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.555 6.555 2 C -0.049 4.049 3 Si 0.771 3.229 4 C -0.288 4.288 5 C 0.211 3.789 6 N -0.593 5.593 7 C 0.555 3.445 8 N -0.677 5.677 9 C 0.136 3.864 10 H 0.112 0.888 11 C -0.134 4.134 12 C -0.076 4.076 13 H 0.091 0.909 14 C -0.111 4.111 15 C -0.053 4.053 16 C -0.153 4.153 17 C 0.107 3.893 18 F -0.142 7.142 19 C -0.200 4.200 20 C 0.111 3.889 21 F -0.141 7.141 22 C -0.127 4.127 23 N -0.571 5.571 24 C 0.197 3.803 25 H 0.395 0.605 26 H 0.112 0.888 27 H -0.282 1.282 28 H -0.298 1.298 29 H 0.179 0.821 30 H 0.416 0.584 31 H 0.118 0.882 32 H 0.063 0.937 33 H 0.177 0.823 34 H 0.165 0.835 35 H 0.148 0.852 36 H 0.075 0.925 37 H 0.119 0.881 38 H 0.192 0.808 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.013 5.144 0.514 5.268 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.363 6.363 2 C -0.161 4.161 3 Si 0.677 3.323 4 C -0.296 4.296 5 C 0.043 3.957 6 N -0.316 5.316 7 C 0.198 3.802 8 N -0.313 5.313 9 C 0.030 3.970 10 H 0.129 0.871 11 C -0.172 4.172 12 C -0.094 4.094 13 H 0.109 0.891 14 C -0.112 4.112 15 C -0.070 4.070 16 C -0.171 4.171 17 C 0.087 3.913 18 F -0.121 7.121 19 C -0.219 4.219 20 C 0.092 3.908 21 F -0.119 7.119 22 C -0.165 4.165 23 N -0.293 5.293 24 C 0.029 3.971 25 H 0.245 0.755 26 H 0.130 0.870 27 H -0.209 1.209 28 H -0.226 1.226 29 H 0.196 0.804 30 H 0.254 0.746 31 H 0.136 0.864 32 H 0.081 0.919 33 H 0.195 0.805 34 H 0.183 0.817 35 H 0.166 0.834 36 H 0.093 0.907 37 H 0.137 0.863 38 H 0.208 0.792 Dipole moment (debyes) X Y Z Total from point charges 2.011 4.977 0.577 5.398 hybrid contribution -0.536 -1.425 -0.573 1.627 sum 1.475 3.551 0.004 3.846 Atomic orbital electron populations 1.86483 1.17275 1.82097 1.50451 1.24837 0.85100 1.10309 0.95815 0.93966 0.77877 0.74918 0.85544 1.21776 1.08626 0.97348 1.01823 1.23120 0.89260 0.91816 0.91459 1.67989 1.17496 1.40820 1.05274 1.19594 0.87363 0.85972 0.87238 1.43948 1.58043 1.11962 1.17326 1.21877 0.92547 0.96013 0.86551 0.87056 1.23640 1.00549 0.96827 0.96211 1.21558 0.99002 0.99948 0.88925 0.89062 1.19989 1.01561 0.93107 0.96527 1.21102 0.94162 0.97849 0.93918 1.21547 1.02729 0.98323 0.94525 1.17572 0.99566 0.95461 0.78676 1.91525 1.89838 1.96947 1.33781 1.21156 1.04897 1.00597 0.95287 1.17389 0.97910 0.84194 0.91345 1.91497 1.82066 1.52132 1.86248 1.23475 0.96685 1.00777 0.95515 1.67950 1.27442 1.08061 1.25868 1.23217 0.87541 1.00262 0.86050 0.75544 0.87042 1.20878 1.22576 0.80371 0.74636 0.86404 0.91853 0.80540 0.81719 0.83379 0.90668 0.86261 0.79174 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 1.41 12.85 -148.98 -1.91 -0.51 16 2 C -0.05 0.17 2.83 71.23 0.20 0.38 16 3 Si 0.77 -4.02 29.88 68.60 2.05 -1.97 16 4 C -0.29 0.40 5.36 -19.69 -0.11 0.29 16 5 C 0.21 0.39 10.99 84.71 0.93 1.32 16 6 N -0.59 -3.27 10.46 -197.98 -2.07 -5.34 16 7 C 0.56 2.28 8.43 261.48 2.20 4.49 16 8 N -0.68 -0.01 5.42 -327.93 -1.78 -1.79 16 9 C 0.14 -0.57 4.33 45.52 0.20 -0.38 16 10 H 0.11 -0.39 7.37 -2.39 -0.02 -0.41 16 11 C -0.13 0.75 7.27 31.18 0.23 0.98 16 12 C -0.08 0.32 3.79 -10.95 -0.04 0.28 16 13 H 0.09 -0.15 7.45 -2.39 -0.02 -0.16 16 14 C -0.11 0.27 5.30 -19.82 -0.10 0.16 16 15 C -0.05 0.33 8.59 22.26 0.19 0.52 16 16 C -0.15 0.58 10.02 22.32 0.22 0.81 16 17 C 0.11 0.14 7.30 22.37 0.16 0.31 16 18 F -0.14 -0.62 17.27 44.97 0.78 0.15 16 19 C -0.20 -0.42 10.01 22.35 0.22 -0.20 16 20 C 0.11 0.23 7.24 22.37 0.16 0.40 16 21 F -0.14 -0.71 16.36 44.97 0.74 0.03 16 22 C -0.13 0.81 7.28 31.12 0.23 1.03 16 23 N -0.57 -1.41 9.13 -197.97 -1.81 -3.22 16 24 C 0.20 -0.30 9.92 84.71 0.84 0.54 16 25 H 0.39 -4.00 8.70 -74.05 -0.64 -4.65 16 26 H 0.11 -0.32 7.96 -2.39 -0.02 -0.34 16 27 H -0.28 0.16 7.11 99.48 0.71 0.87 16 28 H -0.30 -0.84 7.11 99.48 0.71 -0.13 16 29 H 0.18 -0.23 8.06 -2.91 -0.02 -0.26 16 30 H 0.42 -0.34 8.82 -92.71 -0.82 -1.16 16 31 H 0.12 -1.14 6.32 -2.39 -0.02 -1.15 16 32 H 0.06 -0.14 8.14 -2.39 -0.02 -0.16 16 33 H 0.18 -2.24 6.67 -2.91 -0.02 -2.26 16 34 H 0.17 -1.34 8.06 -2.91 -0.02 -1.37 16 35 H 0.15 0.14 8.06 -2.91 -0.02 0.12 16 36 H 0.07 -0.37 8.14 -2.39 -0.02 -0.39 16 37 H 0.12 -1.14 7.71 -2.39 -0.02 -1.16 16 38 H 0.19 -1.48 5.07 -2.91 -0.01 -1.49 16 Total: 0.00 -17.07 330.78 1.25 -15.81 By element: Atomic # 1 Polarization: -13.81 SS G_CDS: -0.28 Total: -14.09 kcal Atomic # 6 Polarization: 5.38 SS G_CDS: 5.54 Total: 10.92 kcal Atomic # 7 Polarization: -4.69 SS G_CDS: -5.65 Total: -10.35 kcal Atomic # 8 Polarization: 1.41 SS G_CDS: -1.91 Total: -0.51 kcal Atomic # 9 Polarization: -1.33 SS G_CDS: 1.51 Total: 0.18 kcal Atomic # 14 Polarization: -4.02 SS G_CDS: 2.05 Total: -1.97 kcal Total: -17.07 1.25 -15.81 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_13428182_12175864.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 18.618 kcal (2) G-P(sol) polarization free energy of solvation -17.066 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 1.552 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.253 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.813 kcal (6) G-S(sol) free energy of system = (1) + (5) 2.805 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.60 seconds