Wall clock time and date at job start Mon Mar 8 2021 05:10:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86293 * 109.47041 * 2 1 4 4 C 1.50707 * 109.46442 * 119.99698 * 2 1 3 5 5 C 1.38018 * 120.33118 * 244.71842 * 4 2 1 6 6 N 1.31974 * 120.85660 * 179.73259 * 5 4 2 7 7 C 1.32400 * 121.61583 * 0.58171 * 6 5 4 8 8 N 1.39007 * 119.70598 * 179.70538 * 7 6 5 9 9 C 1.46498 * 120.00216 * 179.97438 * 8 7 6 10 10 H 1.08998 * 112.84753 * 336.19690 * 9 8 7 11 11 C 1.53777 * 113.61416 * 107.50292 * 9 8 7 12 12 C 1.53782 * 87.08206 * 89.11533 * 11 9 8 13 13 H 1.08997 * 113.61442 * 270.88053 * 12 11 9 14 14 C 1.50707 * 113.69291 * 139.98944 * 12 11 9 15 15 C 1.38183 * 119.98401 * 322.46833 * 14 12 11 16 16 C 1.38231 * 120.04803 * 180.02562 * 15 14 12 17 17 C 1.38449 * 120.02468 * 359.97302 * 16 15 14 18 18 F 1.35101 * 120.01419 * 179.97438 * 17 16 15 19 19 C 1.38441 * 119.97763 * 0.02562 * 17 16 15 20 20 C 1.38400 * 119.94575 * 359.76836 * 19 17 16 21 21 F 1.35101 * 120.01400 * 180.22939 * 20 19 17 22 22 C 1.53782 * 113.61049 * 205.00128 * 9 8 7 23 23 C 1.39137 * 120.59411 * 359.68676 * 7 6 5 24 24 C 1.38298 * 119.09192 * 0.02562 * 23 7 6 25 25 H 0.96700 * 114.00311 * 300.00531 * 1 2 3 26 26 H 1.08999 * 109.47293 * 239.99660 * 2 1 3 27 27 H 1.48506 * 109.99973 * 299.99283 * 3 2 1 28 28 H 1.48493 * 110.00375 * 61.31384 * 3 2 1 29 29 H 1.07997 * 119.57506 * 0.03054 * 5 4 2 30 30 H 0.97006 * 119.99427 * 359.97438 * 8 7 6 31 31 H 1.09005 * 113.61177 * 203.65941 * 11 9 8 32 32 H 1.09002 * 113.61770 * 334.56639 * 11 9 8 33 33 H 1.08001 * 119.98141 * 359.97438 * 15 14 12 34 34 H 1.08007 * 119.98843 * 179.97438 * 16 15 14 35 35 H 1.08004 * 120.02684 * 179.97438 * 19 17 16 36 36 H 1.08990 * 113.61996 * 25.43052 * 22 9 8 37 37 H 1.09006 * 113.61074 * 156.24918 * 22 9 8 38 38 H 1.08002 * 120.45606 * 180.02562 * 23 7 6 39 39 H 1.08008 * 120.74691 * 180.02562 * 24 23 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9312 -0.7104 1.2306 5 6 2.6431 -0.0213 2.1915 6 7 3.0833 -0.6319 3.2755 7 6 2.8717 -1.9229 3.4793 8 7 3.3585 -2.5271 4.6326 9 6 3.1276 -3.9550 4.8649 10 1 2.2594 -4.3363 4.3275 11 6 4.3884 -4.8187 4.6938 12 6 4.6678 -4.5668 6.1849 13 1 5.2607 -3.6717 6.3729 14 6 5.1877 -5.7775 6.9165 15 6 4.6978 -7.0327 6.6101 16 6 5.1734 -8.1440 7.2807 17 6 6.1417 -8.0005 8.2598 18 9 6.6059 -9.0867 8.9155 19 6 6.6332 -6.7434 8.5676 20 6 6.1594 -5.6320 7.8926 21 9 6.6415 -4.4051 8.1886 22 6 3.1545 -4.3495 6.3510 23 6 2.1661 -2.6802 2.5495 24 6 1.6875 -2.0663 1.4064 25 1 -0.3934 0.4418 0.7650 26 1 1.7924 -0.5139 -0.8899 27 1 1.5616 2.4678 -1.2086 28 1 1.5878 2.4586 1.2241 29 1 2.8385 1.0323 2.0568 30 1 3.8511 -2.0032 5.2836 31 1 4.1747 -5.8616 4.4597 32 1 5.1324 -4.3786 4.0297 33 1 3.9422 -7.1456 5.8467 34 1 4.7895 -9.1246 7.0407 35 1 7.3882 -6.6305 9.3316 36 1 2.9023 -3.5308 7.0248 37 1 2.6022 -5.2634 6.5701 38 1 1.9944 -3.7331 2.7181 39 1 1.1361 -2.6286 0.6672 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_13428182_13915762.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 05:10:43 Heat of formation + Delta-G solvation = -18.762272 kcal Electronic energy + Delta-G solvation = -25237.253864 eV Core-core repulsion = 21169.455368 eV Total energy + Delta-G solvation = -4067.798496 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 319.112 amu Computer time = 0.54 seconds Orbital eigenvalues (eV) -50.06570 -50.02363 -41.74671 -40.96068 -39.24031 -37.94953 -35.43328 -33.43225 -32.15955 -31.81906 -30.79167 -26.97514 -26.86936 -25.86234 -24.82205 -24.31549 -23.15445 -22.46840 -20.37889 -19.42663 -18.95884 -18.53777 -18.25454 -17.52590 -17.23507 -17.05069 -16.79327 -16.48588 -16.35528 -16.31374 -16.10120 -15.70993 -15.53798 -15.35041 -15.18037 -14.86200 -14.29649 -14.13999 -14.02567 -13.90944 -13.71500 -13.57749 -13.28684 -13.00615 -12.68870 -12.46078 -12.16816 -12.01329 -11.94176 -11.50194 -11.15056 -10.75836 -10.53800 -10.36848 -10.19982 -9.68189 -8.75970 -4.95384 -0.20771 -0.13377 0.22541 0.40882 1.30112 1.59340 1.94015 1.97802 2.17426 2.75890 2.81252 3.13931 3.31257 3.35542 3.39006 3.44328 3.49948 3.57377 3.67354 3.75959 3.76415 3.87740 3.96163 4.01059 4.05524 4.30657 4.33573 4.45471 4.53560 4.56709 4.64083 4.68024 4.72575 4.75910 4.80478 4.83109 4.90959 4.93359 5.00451 5.16931 5.30674 5.50481 5.62739 5.96588 6.41602 6.47769 7.13573 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.532 6.532 2 C -0.059 4.059 3 Si 0.679 3.321 4 C -0.233 4.233 5 C 0.155 3.845 6 N -0.539 5.539 7 C 0.410 3.590 8 N -0.705 5.705 9 C 0.130 3.870 10 H 0.102 0.898 11 C -0.148 4.148 12 C -0.074 4.074 13 H 0.104 0.896 14 C -0.115 4.115 15 C -0.060 4.060 16 C -0.160 4.160 17 C 0.128 3.872 18 F -0.130 7.130 19 C -0.190 4.190 20 C 0.134 3.866 21 F -0.128 7.128 22 C -0.135 4.135 23 C -0.238 4.238 24 C -0.005 4.005 25 H 0.375 0.625 26 H 0.116 0.884 27 H -0.256 1.256 28 H -0.258 1.258 29 H 0.155 0.845 30 H 0.407 0.593 31 H 0.097 0.903 32 H 0.080 0.920 33 H 0.145 0.855 34 H 0.145 0.855 35 H 0.149 0.851 36 H 0.080 0.920 37 H 0.101 0.899 38 H 0.135 0.865 39 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.205 -2.334 -0.792 2.473 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.338 6.338 2 C -0.170 4.170 3 Si 0.581 3.419 4 C -0.238 4.238 5 C -0.002 4.002 6 N -0.256 5.256 7 C 0.175 3.825 8 N -0.337 5.337 9 C 0.023 3.977 10 H 0.120 0.880 11 C -0.187 4.187 12 C -0.092 4.092 13 H 0.122 0.878 14 C -0.116 4.116 15 C -0.078 4.078 16 C -0.178 4.178 17 C 0.108 3.892 18 F -0.108 7.108 19 C -0.209 4.209 20 C 0.114 3.886 21 F -0.106 7.106 22 C -0.174 4.174 23 C -0.263 4.263 24 C -0.031 4.031 25 H 0.223 0.777 26 H 0.134 0.866 27 H -0.181 1.181 28 H -0.183 1.183 29 H 0.172 0.828 30 H 0.244 0.756 31 H 0.116 0.884 32 H 0.098 0.902 33 H 0.163 0.837 34 H 0.162 0.838 35 H 0.167 0.833 36 H 0.099 0.901 37 H 0.120 0.880 38 H 0.153 0.847 39 H 0.154 0.846 Dipole moment (debyes) X Y Z Total from point charges 0.125 -1.518 -0.663 1.661 hybrid contribution -0.962 -0.509 0.551 1.220 sum -0.838 -2.026 -0.112 2.196 Atomic orbital electron populations 1.86595 1.17964 1.79928 1.49324 1.24754 0.83686 1.10577 0.97977 0.95101 0.91691 0.74730 0.80417 1.20930 1.06853 0.95983 1.00014 1.22270 0.91345 0.99058 0.87570 1.67156 1.25927 1.08989 1.23516 1.18365 0.89074 0.88427 0.86646 1.44162 1.60309 1.08213 1.20990 1.21842 0.98332 0.80339 0.97179 0.88019 1.23687 0.98608 1.01019 0.95353 1.21519 0.96598 0.95700 0.95368 0.87760 1.19803 0.97704 0.96314 0.97796 1.20749 0.98605 0.90056 0.98425 1.21253 0.98328 1.01035 0.97226 1.17339 0.95656 0.82697 0.93499 1.91562 1.87355 1.52499 1.79417 1.21095 1.04800 0.90804 1.04239 1.17155 0.95189 0.79939 0.96273 1.91537 1.86651 1.40279 1.92168 1.23460 0.94935 1.03011 0.95950 1.21497 1.06498 1.01516 0.96743 1.21207 0.93113 0.93394 0.95394 0.77724 0.86575 1.18061 1.18330 0.82788 0.75645 0.88428 0.90154 0.83733 0.83752 0.83282 0.90097 0.88027 0.84739 0.84637 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.54 12.84 -35.23 -0.45 -0.99 16 2 C -0.06 0.03 2.82 36.01 0.10 0.13 16 3 Si 0.68 -0.69 29.90 -169.99 -5.08 -5.77 16 4 C -0.23 -0.05 5.36 -104.46 -0.56 -0.61 16 5 C 0.16 0.15 9.84 -17.57 -0.17 -0.02 16 6 N -0.54 -1.29 10.39 -12.44 -0.13 -1.42 16 7 C 0.41 0.42 7.65 -155.02 -1.19 -0.76 16 8 N -0.71 0.70 5.43 -53.14 -0.29 0.41 16 9 C 0.13 -0.40 4.11 -67.12 -0.28 -0.68 16 10 H 0.10 -0.39 6.10 -51.93 -0.32 -0.71 16 11 C -0.15 0.49 7.25 -25.92 -0.19 0.30 16 12 C -0.07 0.18 3.78 -90.95 -0.34 -0.16 16 13 H 0.10 -0.16 7.44 -51.93 -0.39 -0.55 16 14 C -0.12 0.15 5.30 -104.55 -0.55 -0.40 16 15 C -0.06 0.16 8.61 -39.60 -0.34 -0.18 16 16 C -0.16 0.25 10.02 -39.51 -0.40 -0.14 16 17 C 0.13 0.03 7.30 -39.43 -0.29 -0.25 16 18 F -0.13 -0.21 17.27 2.25 0.04 -0.17 16 19 C -0.19 -0.05 10.01 -39.45 -0.39 -0.44 16 20 C 0.13 0.05 7.24 -39.43 -0.29 -0.24 16 21 F -0.13 -0.19 16.36 2.25 0.04 -0.15 16 22 C -0.14 0.46 7.29 -25.92 -0.19 0.27 16 23 C -0.24 0.02 9.29 -39.23 -0.36 -0.34 16 24 C -0.01 0.00 9.83 -39.32 -0.39 -0.39 16 25 H 0.38 -0.60 8.70 45.56 0.40 -0.21 16 26 H 0.12 -0.14 7.96 -51.93 -0.41 -0.56 16 27 H -0.26 -0.58 7.11 56.52 0.40 -0.18 16 28 H -0.26 -0.24 7.02 56.52 0.40 0.16 16 29 H 0.16 -0.11 4.85 -52.49 -0.25 -0.37 16 30 H 0.41 -0.42 8.83 -40.82 -0.36 -0.78 16 31 H 0.10 -0.46 6.32 -51.93 -0.33 -0.78 16 32 H 0.08 -0.16 8.14 -51.93 -0.42 -0.58 16 33 H 0.15 -0.74 6.66 -52.49 -0.35 -1.09 16 34 H 0.14 -0.47 8.06 -52.48 -0.42 -0.90 16 35 H 0.15 -0.11 8.06 -52.48 -0.42 -0.53 16 36 H 0.08 -0.22 8.14 -51.93 -0.42 -0.64 16 37 H 0.10 -0.45 7.73 -51.93 -0.40 -0.85 16 38 H 0.13 -0.29 6.04 -52.49 -0.32 -0.60 16 39 H 0.14 -0.15 8.06 -52.48 -0.42 -0.58 16 LS Contribution 333.10 15.07 5.02 5.02 Total: 0.00 -6.03 333.10 -10.73 -16.76 By element: Atomic # 1 Polarization: -5.70 SS G_CDS: -4.05 Total: -9.74 kcal Atomic # 6 Polarization: 1.89 SS G_CDS: -5.82 Total: -3.93 kcal Atomic # 7 Polarization: -0.60 SS G_CDS: -0.42 Total: -1.02 kcal Atomic # 8 Polarization: -0.54 SS G_CDS: -0.45 Total: -0.99 kcal Atomic # 9 Polarization: -0.40 SS G_CDS: 0.08 Total: -0.33 kcal Atomic # 14 Polarization: -0.69 SS G_CDS: -5.08 Total: -5.77 kcal Total LS contribution 5.02 Total: 5.02 kcal Total: -6.03 -10.73 -16.76 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_13428182_13915762.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -2.006 kcal (2) G-P(sol) polarization free energy of solvation -6.028 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -8.034 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.728 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.756 kcal (6) G-S(sol) free energy of system = (1) + (5) -18.762 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.54 seconds