Wall clock time and date at job start Mon Mar 8 2021 04:33:16 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53003 * 1 3 3 C 1.52993 * 109.47019 * 2 1 4 4 C 1.52996 * 109.47310 * 239.99846 * 2 1 3 5 5 O 1.45201 * 109.46702 * 120.00078 * 2 1 3 6 6 C 1.34632 * 117.00392 * 60.00013 * 5 2 1 7 7 O 1.21513 * 119.99916 * 0.02562 * 6 5 2 8 8 N 1.34771 * 120.00076 * 179.97438 * 6 5 2 9 9 C 1.46508 * 120.00234 * 180.02562 * 8 6 5 10 10 C 1.52995 * 109.46941 * 180.02562 * 9 8 6 11 11 H 1.08997 * 112.85668 * 43.80790 * 10 9 8 12 12 C 1.53781 * 113.60972 * 175.00091 * 10 9 8 13 13 C 1.53786 * 87.08263 * 139.97795 * 12 10 9 14 14 H 1.09010 * 113.61114 * 89.19985 * 13 12 10 15 15 N 1.46494 * 113.61794 * 220.01580 * 13 12 10 16 16 C 1.39141 * 120.00118 * 204.99823 * 15 13 12 17 17 N 1.32331 * 119.71745 * 0.02630 * 16 15 13 18 18 C 1.32016 * 121.64557 * 179.97438 * 17 16 15 19 19 C 1.37979 * 120.90322 * 359.97438 * 18 17 16 20 20 C 1.50700 * 120.33026 * 180.02562 * 19 18 17 21 21 O 1.42899 * 109.47143 * 120.00173 * 20 19 18 22 22 Si 1.86296 * 109.46883 * 0.02562 * 20 19 18 23 23 C 1.38907 * 119.34592 * 359.77085 * 19 18 17 24 24 C 1.38452 * 118.48172 * 0.49369 * 23 19 18 25 25 F 1.35104 * 120.46982 * 179.75500 * 24 23 19 26 26 C 1.53778 * 87.07905 * 334.57043 * 13 12 10 27 27 H 1.08997 * 109.47232 * 299.99915 * 1 2 3 28 28 H 1.09001 * 109.46969 * 60.00401 * 1 2 3 29 29 H 1.09006 * 109.46969 * 179.97438 * 1 2 3 30 30 H 1.09000 * 109.47158 * 179.97438 * 3 2 1 31 31 H 1.08995 * 109.47347 * 299.99754 * 3 2 1 32 32 H 1.09001 * 109.47256 * 59.99520 * 3 2 1 33 33 H 1.09006 * 109.47436 * 300.00120 * 4 2 1 34 34 H 1.09001 * 109.47306 * 59.99959 * 4 2 1 35 35 H 1.08996 * 109.47465 * 180.02562 * 4 2 1 36 36 H 0.97006 * 120.00232 * 0.02562 * 8 6 5 37 37 H 1.09002 * 109.46615 * 60.00284 * 9 8 6 38 38 H 1.08997 * 109.46549 * 300.00498 * 9 8 6 39 39 H 1.09000 * 113.61641 * 25.43268 * 12 10 9 40 40 H 1.09004 * 113.69495 * 254.53610 * 12 10 9 41 41 H 0.97006 * 119.99658 * 25.00400 * 15 13 12 42 42 H 1.08004 * 119.55006 * 180.02562 * 18 17 16 43 43 H 1.09000 * 109.47062 * 240.00223 * 20 19 18 44 44 H 0.96692 * 113.99981 * 179.97438 * 21 20 19 45 45 H 1.48500 * 110.00063 * 298.67965 * 22 20 19 46 46 H 1.48503 * 110.00243 * 60.00167 * 22 20 19 47 47 H 1.08001 * 120.76394 * 180.25229 * 23 19 18 48 48 H 1.09001 * 113.61561 * 139.97963 * 26 13 12 49 49 H 1.09006 * 113.61108 * 270.88244 * 26 13 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4424 0.0000 4 6 2.0401 -0.7213 -1.2492 5 8 2.0139 -0.6845 1.1856 6 6 1.6522 -1.9723 1.3384 7 8 0.9516 -2.5097 0.5036 8 7 2.0679 -2.6656 2.4167 9 6 1.6747 -4.0672 2.5827 10 6 2.2747 -4.6150 3.8792 11 1 2.1797 -3.9224 4.7154 12 6 1.8218 -6.0467 4.2107 13 6 3.2668 -6.3149 4.6634 14 1 3.4440 -6.0887 5.7150 15 7 3.7687 -7.6347 4.2732 16 6 4.7902 -8.2343 5.0032 17 7 5.3039 -7.6077 6.0494 18 6 6.2734 -8.1414 6.7692 19 6 6.7895 -9.3816 6.4541 20 6 7.8959 -9.9789 7.2849 21 8 7.4560 -11.2184 7.8436 22 14 8.3445 -8.8035 8.6589 23 6 6.2756 -10.0766 5.3667 24 6 5.2631 -9.4899 4.6268 25 9 4.7373 -10.1280 3.5583 26 6 3.6919 -5.1869 3.7086 27 1 -0.3633 0.5138 0.8900 28 1 -0.3633 0.5138 -0.8900 29 1 -0.3633 -1.0277 -0.0005 30 1 3.1300 1.4425 0.0005 31 1 1.6767 1.9563 -0.8900 32 1 1.6766 1.9563 0.8899 33 1 1.6767 -1.7490 -1.2492 34 1 1.6768 -0.2075 -2.1392 35 1 3.1300 -0.7217 -1.2490 36 1 2.6275 -2.2368 3.0830 37 1 2.0413 -4.6499 1.7376 38 1 0.5879 -4.1366 2.6279 39 1 1.5242 -6.6242 3.3354 40 1 1.0937 -6.0994 5.0202 41 1 3.3889 -8.0905 3.5057 42 1 6.6675 -7.6002 7.6167 43 1 8.7689 -10.1534 6.6560 44 1 8.1190 -11.6602 8.3915 45 1 8.8336 -7.5215 8.0911 46 1 7.1624 -8.5580 9.5235 47 1 6.6597 -11.0507 5.1021 48 1 4.4738 -4.5441 4.1130 49 1 3.9056 -5.5294 2.6960 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_13437772_17656566.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:33:16 Heat of formation + Delta-G solvation = -87.622698 kcal Electronic energy + Delta-G solvation = -30909.746855 eV Core-core repulsion = 26368.153973 eV Total energy + Delta-G solvation = -4541.592883 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 354.179 amu Computer time = 1.10 seconds Orbital eigenvalues (eV) -49.87710 -41.73127 -41.47543 -40.46665 -38.32060 -37.89524 -36.17704 -35.29862 -34.58221 -33.24947 -31.49376 -28.98771 -28.31229 -28.27195 -26.91468 -26.49805 -25.33350 -23.68955 -22.91952 -22.43371 -21.33897 -20.65347 -19.29379 -19.03460 -18.62753 -18.28850 -17.99466 -17.60380 -17.20462 -16.89540 -16.74850 -16.65915 -16.14013 -15.88930 -15.54503 -15.47113 -15.33232 -15.05764 -15.01115 -14.58134 -14.37372 -14.35862 -13.95487 -13.86795 -13.65025 -13.56837 -13.39956 -13.28548 -13.05776 -12.82465 -12.80832 -12.57242 -12.41822 -12.35570 -12.19770 -12.09037 -11.97450 -11.56387 -11.27066 -11.22810 -10.94503 -10.77435 -10.68510 -10.35411 -10.17026 -8.77723 -5.06042 -0.10492 0.10900 1.19087 1.22043 1.57048 1.87770 1.92989 1.94299 2.49437 3.02865 3.09018 3.15446 3.29127 3.32781 3.47327 3.59892 3.61421 3.69204 3.79698 3.81646 3.84824 3.98923 4.00063 4.09399 4.24344 4.30683 4.46497 4.50532 4.55603 4.57720 4.61505 4.64178 4.64430 4.64890 4.77129 4.79514 4.86717 4.90540 4.91469 4.94714 4.96049 5.08617 5.12034 5.24405 5.38082 5.41008 5.47517 5.62706 5.92181 6.14912 6.43937 6.54614 6.91246 7.45417 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.184 4.184 2 C 0.137 3.863 3 C -0.142 4.142 4 C -0.184 4.184 5 O -0.365 6.365 6 C 0.649 3.351 7 O -0.567 6.567 8 N -0.711 5.711 9 C 0.150 3.850 10 C -0.122 4.122 11 H 0.105 0.895 12 C -0.137 4.137 13 C 0.136 3.864 14 H 0.121 0.879 15 N -0.706 5.706 16 C 0.390 3.610 17 N -0.511 5.511 18 C 0.142 3.858 19 C -0.163 4.163 20 C -0.059 4.059 21 O -0.547 6.547 22 Si 0.682 3.318 23 C -0.034 4.034 24 C -0.018 4.018 25 F -0.132 7.132 26 C -0.149 4.149 27 H 0.060 0.940 28 H 0.072 0.928 29 H 0.087 0.913 30 H 0.067 0.933 31 H 0.082 0.918 32 H 0.067 0.933 33 H 0.087 0.913 34 H 0.072 0.928 35 H 0.059 0.941 36 H 0.407 0.593 37 H 0.073 0.927 38 H 0.074 0.926 39 H 0.091 0.909 40 H 0.082 0.918 41 H 0.413 0.587 42 H 0.154 0.846 43 H 0.077 0.923 44 H 0.384 0.616 45 H -0.251 1.251 46 H -0.247 1.247 47 H 0.152 0.848 48 H 0.076 0.924 49 H 0.087 0.913 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.100 0.125 3.237 5.225 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.241 4.241 2 C 0.100 3.900 3 C -0.199 4.199 4 C -0.241 4.241 5 O -0.280 6.280 6 C 0.402 3.598 7 O -0.456 6.456 8 N -0.371 5.371 9 C 0.027 3.973 10 C -0.141 4.141 11 H 0.123 0.877 12 C -0.176 4.176 13 C 0.031 3.969 14 H 0.139 0.861 15 N -0.338 5.338 16 C 0.151 3.849 17 N -0.228 5.228 18 C -0.015 4.015 19 C -0.168 4.168 20 C -0.171 4.171 21 O -0.354 6.354 22 Si 0.583 3.417 23 C -0.060 4.060 24 C -0.044 4.044 25 F -0.111 7.111 26 C -0.188 4.188 27 H 0.079 0.921 28 H 0.091 0.909 29 H 0.106 0.894 30 H 0.086 0.914 31 H 0.101 0.899 32 H 0.086 0.914 33 H 0.105 0.895 34 H 0.091 0.909 35 H 0.079 0.921 36 H 0.241 0.759 37 H 0.091 0.909 38 H 0.092 0.908 39 H 0.110 0.890 40 H 0.101 0.899 41 H 0.251 0.749 42 H 0.171 0.829 43 H 0.095 0.905 44 H 0.232 0.768 45 H -0.176 1.176 46 H -0.172 1.172 47 H 0.169 0.831 48 H 0.094 0.906 49 H 0.106 0.894 Dipole moment (debyes) X Y Z Total from point charges 2.608 1.833 3.050 4.412 hybrid contribution 0.118 -1.027 -1.037 1.464 sum 2.725 0.805 2.014 3.483 Atomic orbital electron populations 1.22522 0.93851 1.05038 1.02700 1.22112 0.94448 0.91560 0.81882 1.21875 1.02322 0.92364 1.03331 1.22520 1.01585 1.03446 0.96561 1.86302 1.71509 1.23490 1.46713 1.18108 0.78854 0.80636 0.82195 1.90921 1.41025 1.70507 1.43180 1.44711 1.55836 1.12620 1.23901 1.21332 1.00138 0.78842 0.96951 1.22612 0.96984 0.96782 0.97742 0.87723 1.23370 0.96758 0.95041 1.02396 1.22490 0.93219 0.80981 1.00243 0.86144 1.44579 1.36933 1.19987 1.32300 1.18435 0.89121 0.87489 0.89815 1.67243 1.13530 1.35253 1.06745 1.22119 0.90770 0.92260 0.96373 1.19938 1.01911 0.96412 0.98588 1.24469 0.96343 0.93562 1.02696 1.86488 1.44115 1.35025 1.69724 0.95081 0.85923 0.79119 0.81610 1.21267 0.92620 0.99874 0.92287 1.17989 1.01602 0.93388 0.91459 1.91497 1.85521 1.81204 1.52859 1.23647 0.96459 0.97819 1.00892 0.92117 0.90938 0.89447 0.91410 0.89930 0.91397 0.89458 0.90929 0.92146 0.75856 0.90912 0.90788 0.89040 0.89912 0.74916 0.82917 0.90546 0.76824 1.17576 1.17151 0.83076 0.90569 0.89429 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.32 8.37 37.16 0.31 -0.01 16 2 C 0.14 0.24 1.13 -90.62 -0.10 0.14 16 3 C -0.14 0.05 8.85 37.15 0.33 0.38 16 4 C -0.18 -0.33 8.37 37.16 0.31 -0.02 16 5 O -0.37 -1.06 9.94 -40.30 -0.40 -1.46 16 6 C 0.65 2.13 8.06 54.05 0.44 2.56 16 7 O -0.57 -3.21 11.88 -19.28 -0.23 -3.44 16 8 N -0.71 -0.14 5.56 -65.28 -0.36 -0.50 16 9 C 0.15 -0.13 5.51 -4.04 -0.02 -0.16 16 10 C -0.12 0.33 3.75 -89.81 -0.34 -0.01 16 11 H 0.10 -0.35 8.14 -51.93 -0.42 -0.78 16 12 C -0.14 0.35 7.39 -25.92 -0.19 0.15 16 13 C 0.14 -0.13 4.27 -67.12 -0.29 -0.42 16 14 H 0.12 0.01 7.41 -51.92 -0.38 -0.37 16 15 N -0.71 -0.27 5.51 -53.06 -0.29 -0.56 16 16 C 0.39 1.00 7.49 -154.87 -1.16 -0.16 16 17 N -0.51 -1.63 9.13 -12.37 -0.11 -1.74 16 18 C 0.14 0.34 9.84 -17.57 -0.17 0.17 16 19 C -0.16 -0.28 5.43 -104.47 -0.57 -0.84 16 20 C -0.06 0.06 2.83 36.01 0.10 0.16 16 21 O -0.55 0.39 12.75 -35.23 -0.45 -0.06 16 22 Si 0.68 -1.45 29.82 -169.99 -5.07 -6.51 16 23 C -0.03 -0.07 9.75 -39.25 -0.38 -0.45 16 24 C -0.02 -0.05 7.35 -39.09 -0.29 -0.34 16 25 F -0.13 -0.37 16.65 2.25 0.04 -0.33 16 26 C -0.15 0.25 7.43 -25.92 -0.19 0.06 16 27 H 0.06 0.09 8.14 -51.93 -0.42 -0.34 16 28 H 0.07 0.02 8.14 -51.93 -0.42 -0.40 16 29 H 0.09 0.34 5.88 -51.93 -0.31 0.03 16 30 H 0.07 -0.03 8.14 -51.93 -0.42 -0.45 16 31 H 0.08 -0.14 8.14 -51.93 -0.42 -0.56 16 32 H 0.07 -0.03 8.14 -51.93 -0.42 -0.45 16 33 H 0.09 0.34 5.88 -51.93 -0.31 0.04 16 34 H 0.07 0.03 8.14 -51.93 -0.42 -0.40 16 35 H 0.06 0.09 8.14 -51.93 -0.42 -0.33 16 36 H 0.41 -0.70 8.58 -40.82 -0.35 -1.05 16 37 H 0.07 -0.01 7.84 -51.93 -0.41 -0.41 16 38 H 0.07 -0.02 8.14 -51.93 -0.42 -0.44 16 39 H 0.09 -0.26 8.08 -51.93 -0.42 -0.68 16 40 H 0.08 -0.22 8.14 -51.93 -0.42 -0.64 16 41 H 0.41 -0.31 8.20 -40.82 -0.33 -0.65 16 42 H 0.15 0.19 4.88 -52.48 -0.26 -0.07 16 43 H 0.08 -0.21 7.96 -51.93 -0.41 -0.62 16 44 H 0.38 -2.19 8.74 45.56 0.40 -1.80 16 45 H -0.25 -0.03 7.11 56.52 0.40 0.37 16 46 H -0.25 -0.25 7.11 56.52 0.40 0.15 16 47 H 0.15 0.08 8.06 -52.49 -0.42 -0.35 16 48 H 0.08 -0.09 8.14 -51.93 -0.42 -0.52 16 49 H 0.09 -0.09 7.90 -51.93 -0.41 -0.50 16 LS Contribution 400.23 15.07 6.03 6.03 Total: 0.00 -8.04 400.23 -10.52 -18.56 By element: Atomic # 1 Polarization: -3.75 SS G_CDS: -7.46 Total: -11.21 kcal Atomic # 6 Polarization: 3.44 SS G_CDS: -2.21 Total: 1.23 kcal Atomic # 7 Polarization: -2.03 SS G_CDS: -0.77 Total: -2.80 kcal Atomic # 8 Polarization: -3.89 SS G_CDS: -1.08 Total: -4.96 kcal Atomic # 9 Polarization: -0.37 SS G_CDS: 0.04 Total: -0.33 kcal Atomic # 14 Polarization: -1.45 SS G_CDS: -5.07 Total: -6.51 kcal Total LS contribution 6.03 Total: 6.03 kcal Total: -8.04 -10.52 -18.56 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_13437772_17656566.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -69.062 kcal (2) G-P(sol) polarization free energy of solvation -8.041 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -77.103 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.519 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.560 kcal (6) G-S(sol) free energy of system = (1) + (5) -87.623 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.10 seconds