Wall clock time and date at job start Mon Mar 8 2021 07:04:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50705 * 1 3 3 C 1.33325 * 125.94891 * 2 1 4 4 C 1.50697 * 122.71486 * 0.02562 * 3 2 1 5 5 O 1.42905 * 109.46976 * 29.99253 * 4 3 2 6 6 Si 1.86298 * 109.47440 * 149.99673 * 4 3 2 7 7 N 1.32134 * 114.57740 * 179.75195 * 3 2 1 8 8 C 1.29687 * 116.86439 * 0.47264 * 7 3 2 9 9 N 1.38606 * 124.94848 * 179.81587 * 8 7 3 10 10 C 1.46498 * 119.99817 * 179.97438 * 9 8 7 11 11 H 1.09004 * 109.47372 * 34.71901 * 10 9 8 12 12 C 1.52999 * 109.46963 * 154.72339 * 10 9 8 13 13 C 1.53003 * 109.47087 * 179.97438 * 12 10 9 14 14 C 1.52997 * 109.47241 * 300.00042 * 13 12 10 15 15 H 1.08995 * 109.47096 * 299.99819 * 14 13 12 16 16 C 1.50702 * 109.47467 * 179.97438 * 14 13 12 17 17 N 1.29902 * 124.85544 * 119.99579 * 16 14 13 18 18 C 1.36057 * 108.80488 * 180.02562 * 17 16 14 19 19 C 1.39544 * 133.81478 * 179.97438 * 18 17 16 20 20 C 1.37724 * 119.73268 * 179.97438 * 19 18 17 21 21 C 1.38676 * 120.42010 * 0.04245 * 20 19 18 22 22 C 1.37955 * 120.47644 * 359.97438 * 21 20 19 23 23 C 1.38630 * 119.87141 * 0.02562 * 22 21 20 24 24 O 1.34237 * 124.84680 * 299.69985 * 16 14 13 25 25 C 1.52999 * 109.47114 * 59.99975 * 14 13 12 26 26 C 1.52997 * 109.47036 * 274.72180 * 10 9 8 27 27 S 1.70965 * 110.10106 * 359.54907 * 8 7 3 28 28 H 1.09001 * 109.46886 * 179.97438 * 1 2 3 29 29 H 1.09002 * 109.46876 * 299.97637 * 1 2 3 30 30 H 1.08997 * 109.46563 * 59.97679 * 1 2 3 31 31 H 1.09000 * 109.46815 * 269.99628 * 4 3 2 32 32 H 0.96707 * 113.99186 * 60.00616 * 5 4 3 33 33 H 1.48498 * 110.00110 * 179.97438 * 6 4 3 34 34 H 1.48501 * 110.00077 * 301.31710 * 6 4 3 35 35 H 0.97001 * 119.99738 * 359.71587 * 9 8 7 36 36 H 1.08997 * 109.46923 * 299.99333 * 12 10 9 37 37 H 1.08995 * 109.47266 * 59.99845 * 12 10 9 38 38 H 1.09004 * 109.47044 * 59.99688 * 13 12 10 39 39 H 1.08997 * 109.47066 * 179.97438 * 13 12 10 40 40 H 1.08005 * 120.13422 * 0.02562 * 19 18 17 41 41 H 1.07999 * 119.78760 * 180.02562 * 20 19 18 42 42 H 1.07994 * 119.76116 * 179.97438 * 21 20 19 43 43 H 1.08000 * 120.06447 * 180.02562 * 22 21 20 44 44 H 1.08995 * 109.47266 * 59.99948 * 25 14 13 45 45 H 1.09000 * 109.47204 * 180.02562 * 25 14 13 46 46 H 1.09009 * 109.47238 * 300.00198 * 26 10 9 47 47 H 1.08997 * 109.47293 * 60.00168 * 26 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2897 1.0793 0.0000 4 6 1.7415 2.4830 0.0006 5 8 0.4815 2.5019 0.6745 6 14 2.9326 3.6147 0.8787 7 7 3.5851 0.8188 0.0052 8 6 3.9316 -0.4309 0.0000 9 7 5.2385 -0.8926 0.0005 10 6 5.5066 -2.3328 -0.0051 11 1 4.7438 -2.8421 -0.5940 12 6 6.8834 -2.5928 -0.6195 13 6 7.1637 -4.0970 -0.6249 14 6 7.1378 -4.6257 0.8106 15 1 7.9005 -4.1161 1.3993 16 6 7.4132 -6.1073 0.8054 17 7 8.4093 -6.6794 1.4120 18 6 8.3450 -8.0205 1.1920 19 6 9.1314 -9.1032 1.5876 20 6 8.7910 -10.3767 1.1884 21 6 7.6730 -10.5888 0.3958 22 6 6.8866 -9.5278 -0.0031 23 6 7.2145 -8.2394 0.3895 24 8 6.6610 -7.0251 0.1778 25 6 5.7609 -4.3656 1.4251 26 6 5.4805 -2.8620 1.4302 27 16 2.5414 -1.4261 0.0000 28 1 -0.3633 -1.0277 -0.0005 29 1 -0.3633 0.5135 0.8902 30 1 -0.3632 0.5142 -0.8898 31 1 1.6090 2.8217 -1.0270 32 1 0.5241 2.2118 1.5961 33 1 2.4036 5.0023 0.8856 34 1 3.1463 3.1453 2.2713 35 1 5.9756 -0.2620 0.0008 36 1 6.9020 -2.2159 -1.6421 37 1 7.6462 -2.0836 -0.0306 38 1 6.4009 -4.6066 -1.2136 39 1 8.1444 -4.2822 -1.0630 40 1 10.0031 -8.9434 2.2050 41 1 9.3988 -11.2153 1.4944 42 1 7.4162 -11.5917 0.0886 43 1 6.0172 -9.7007 -0.6200 44 1 4.9982 -4.8752 0.8364 45 1 5.7426 -4.7419 2.4479 46 1 6.2433 -2.3527 2.0192 47 1 4.4996 -2.6768 1.8680 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_13774300_15704122.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 07:04:09 Heat of formation + Delta-G solvation = 50.331215 kcal Electronic energy + Delta-G solvation = -30356.964439 eV Core-core repulsion = 26213.049018 eV Total energy + Delta-G solvation = -4143.915421 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 372.129 amu Computer time = 1.21 seconds Orbital eigenvalues (eV) -44.28865 -41.09497 -40.34523 -38.97023 -37.89514 -36.41536 -35.62323 -33.11127 -32.19190 -31.73329 -31.63174 -29.87836 -28.83879 -25.70847 -25.17248 -24.40192 -24.15969 -23.77643 -23.02304 -22.34531 -21.49768 -20.43383 -19.12644 -18.93570 -18.26192 -17.95127 -17.70114 -17.33198 -17.22288 -16.71465 -16.54094 -15.85664 -15.66503 -15.57410 -15.45958 -15.19017 -15.07815 -14.82199 -14.37505 -14.20094 -14.11799 -13.84914 -13.69052 -13.58427 -13.47593 -13.41417 -13.29241 -12.88598 -12.66544 -12.54133 -12.51896 -12.46975 -12.42241 -12.27101 -11.87663 -11.78448 -11.63136 -11.46831 -10.96316 -10.57984 -10.48452 -9.98059 -9.83375 -9.47364 -8.61785 -4.65685 -0.34855 0.04033 0.19143 0.20058 0.79555 1.37543 1.40209 1.42431 1.81767 1.84729 1.97758 2.13308 2.59290 2.62873 3.24803 3.31616 3.34325 3.47783 3.53949 3.60986 3.69980 3.81749 3.89268 3.98184 4.01830 4.09316 4.14500 4.15173 4.17812 4.22584 4.32928 4.34944 4.40884 4.49429 4.59595 4.64381 4.74872 4.78884 4.79931 4.81042 4.87208 4.89337 4.95428 5.00747 5.04169 5.10665 5.17230 5.27736 5.29835 5.32478 5.57849 5.60612 6.25039 6.39139 6.60054 6.96644 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 C -0.243 4.243 3 C 0.068 3.932 4 C -0.042 4.042 5 O -0.526 6.526 6 Si 0.722 3.278 7 N -0.538 5.538 8 C 0.321 3.679 9 N -0.690 5.690 10 C 0.149 3.851 11 H 0.085 0.915 12 C -0.122 4.122 13 C -0.112 4.112 14 C 0.003 3.997 15 H 0.121 0.879 16 C 0.256 3.744 17 N -0.477 5.477 18 C 0.019 3.981 19 C -0.061 4.061 20 C -0.119 4.119 21 C -0.092 4.092 22 C -0.093 4.093 23 C 0.007 3.993 24 O -0.210 6.210 25 C -0.113 4.113 26 C -0.135 4.135 27 S 0.099 5.901 28 H 0.058 0.942 29 H 0.079 0.921 30 H 0.076 0.924 31 H 0.124 0.876 32 H 0.375 0.625 33 H -0.261 1.261 34 H -0.268 1.268 35 H 0.414 0.586 36 H 0.083 0.917 37 H 0.080 0.920 38 H 0.078 0.922 39 H 0.081 0.919 40 H 0.137 0.863 41 H 0.139 0.861 42 H 0.142 0.858 43 H 0.136 0.864 44 H 0.077 0.923 45 H 0.079 0.921 46 H 0.078 0.922 47 H 0.076 0.924 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.679 -3.630 -1.232 4.185 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.119 4.119 2 C -0.366 4.366 3 C -0.063 4.063 4 C -0.154 4.154 5 O -0.331 6.331 6 Si 0.623 3.377 7 N -0.265 5.265 8 C -0.050 4.050 9 N -0.330 5.330 10 C 0.044 3.956 11 H 0.103 0.897 12 C -0.160 4.160 13 C -0.151 4.151 14 C -0.017 4.017 15 H 0.139 0.861 16 C 0.044 3.956 17 N -0.205 5.205 18 C -0.092 4.092 19 C -0.080 4.080 20 C -0.138 4.138 21 C -0.110 4.110 22 C -0.112 4.112 23 C -0.043 4.043 24 O -0.102 6.102 25 C -0.152 4.152 26 C -0.174 4.174 27 S 0.348 5.652 28 H 0.077 0.923 29 H 0.098 0.902 30 H 0.094 0.906 31 H 0.141 0.859 32 H 0.223 0.777 33 H -0.187 1.187 34 H -0.193 1.193 35 H 0.252 0.748 36 H 0.102 0.898 37 H 0.099 0.901 38 H 0.097 0.903 39 H 0.100 0.900 40 H 0.155 0.845 41 H 0.157 0.843 42 H 0.160 0.840 43 H 0.154 0.846 44 H 0.096 0.904 45 H 0.097 0.903 46 H 0.097 0.903 47 H 0.094 0.906 Dipole moment (debyes) X Y Z Total from point charges 2.329 -3.456 -0.781 4.240 hybrid contribution -1.180 -0.040 0.259 1.209 sum 1.149 -3.495 -0.522 3.716 Atomic orbital electron populations 1.20140 0.86499 1.01643 1.03606 1.25133 1.01301 0.92876 1.17283 1.20072 0.86872 0.97113 1.02210 1.24469 0.91876 0.95405 1.03676 1.86627 1.28647 1.89037 1.28816 0.93622 0.86147 0.76377 0.81601 1.65737 1.16972 1.16436 1.27316 1.23267 0.91823 0.91398 0.98530 1.44001 1.01795 1.06842 1.80380 1.21207 0.98575 0.79043 0.96759 0.89723 1.21748 0.95515 0.96183 1.02541 1.21587 1.03905 0.95142 0.94465 1.20030 1.00517 0.81660 0.99456 0.86135 1.26333 0.85795 0.93834 0.89606 1.70653 1.21880 1.05136 1.22870 1.19900 0.97102 0.91246 1.00932 1.20381 0.98803 0.89696 0.99142 1.21119 0.97640 0.96589 0.98457 1.21091 0.94290 0.98549 0.97061 1.19937 1.01891 0.86954 1.02437 1.20355 0.95711 0.86244 1.01959 1.84475 1.48788 1.14692 1.62223 1.21597 0.94940 0.96414 1.02268 1.22054 1.03631 0.95009 0.96751 1.84006 0.96543 1.10535 1.74079 0.92324 0.90240 0.90569 0.85862 0.77686 1.18661 1.19260 0.74783 0.89822 0.90125 0.90335 0.90016 0.84527 0.84295 0.83997 0.84583 0.90436 0.90274 0.90308 0.90565 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.06 -0.02 8.91 36.01 0.32 0.30 16 2 C -0.24 -0.41 6.50 -36.02 -0.23 -0.64 16 3 C 0.07 0.15 5.92 -84.18 -0.50 -0.35 16 4 C -0.04 -0.05 2.94 36.00 0.11 0.05 16 5 O -0.53 -0.62 10.17 -35.23 -0.36 -0.97 16 6 Si 0.72 0.90 32.08 -169.99 -5.45 -4.56 16 7 N -0.54 -1.25 8.94 -11.36 -0.10 -1.36 16 8 C 0.32 0.30 8.22 -87.68 -0.72 -0.42 16 9 N -0.69 1.16 5.23 -55.79 -0.29 0.87 16 10 C 0.15 -0.46 2.41 -67.93 -0.16 -0.63 16 11 H 0.08 -0.22 7.25 -51.93 -0.38 -0.60 16 12 C -0.12 0.52 5.39 -26.73 -0.14 0.37 16 13 C -0.11 0.36 5.19 -26.73 -0.14 0.22 16 14 C 0.00 -0.01 2.66 -91.77 -0.24 -0.25 16 15 H 0.12 -0.30 8.14 -51.93 -0.42 -0.72 16 16 C 0.26 0.44 6.74 -13.09 -0.09 0.35 16 17 N -0.48 -1.88 11.34 -8.70 -0.10 -1.97 16 18 C 0.02 0.07 7.24 -84.71 -0.61 -0.54 16 19 C -0.06 -0.09 10.10 -39.28 -0.40 -0.49 16 20 C -0.12 0.06 10.02 -39.61 -0.40 -0.34 16 21 C -0.09 0.07 10.03 -39.52 -0.40 -0.32 16 22 C -0.09 -0.06 10.06 -39.54 -0.40 -0.45 16 23 C 0.01 0.02 7.43 -38.64 -0.29 -0.27 16 24 O -0.21 -0.55 10.77 3.59 0.04 -0.51 16 25 C -0.11 0.29 5.18 -26.75 -0.14 0.15 16 26 C -0.14 0.41 5.51 -26.75 -0.15 0.26 16 27 S 0.10 0.05 21.70 -107.50 -2.33 -2.28 16 28 H 0.06 -0.02 8.14 -51.93 -0.42 -0.44 16 29 H 0.08 -0.03 6.39 -51.93 -0.33 -0.37 16 30 H 0.08 0.05 8.14 -51.93 -0.42 -0.37 16 31 H 0.12 0.06 7.96 -51.93 -0.41 -0.35 16 32 H 0.38 -0.45 8.13 45.56 0.37 -0.08 16 33 H -0.26 -0.93 7.11 56.52 0.40 -0.53 16 34 H -0.27 -1.07 7.11 56.52 0.40 -0.67 16 35 H 0.41 -1.09 8.73 -40.82 -0.36 -1.45 16 36 H 0.08 -0.35 8.14 -51.93 -0.42 -0.78 16 37 H 0.08 -0.40 8.14 -51.93 -0.42 -0.82 16 38 H 0.08 -0.22 8.14 -51.93 -0.42 -0.65 16 39 H 0.08 -0.23 8.14 -51.93 -0.42 -0.66 16 40 H 0.14 0.02 8.06 -52.48 -0.42 -0.41 16 41 H 0.14 -0.42 8.06 -52.49 -0.42 -0.84 16 42 H 0.14 -0.50 8.06 -52.49 -0.42 -0.92 16 43 H 0.14 -0.19 8.06 -52.49 -0.42 -0.61 16 44 H 0.08 -0.18 8.14 -51.93 -0.42 -0.60 16 45 H 0.08 -0.16 8.14 -51.93 -0.42 -0.58 16 46 H 0.08 -0.25 8.14 -51.92 -0.42 -0.68 16 47 H 0.08 -0.15 8.06 -51.93 -0.42 -0.57 16 LS Contribution 395.04 15.07 5.95 5.95 Total: 0.00 -7.65 395.04 -13.87 -21.52 By element: Atomic # 1 Polarization: -7.06 SS G_CDS: -6.64 Total: -13.70 kcal Atomic # 6 Polarization: 1.59 SS G_CDS: -4.58 Total: -2.99 kcal Atomic # 7 Polarization: -1.97 SS G_CDS: -0.49 Total: -2.46 kcal Atomic # 8 Polarization: -1.16 SS G_CDS: -0.32 Total: -1.48 kcal Atomic # 14 Polarization: 0.90 SS G_CDS: -5.45 Total: -4.56 kcal Atomic # 16 Polarization: 0.05 SS G_CDS: -2.33 Total: -2.28 kcal Total LS contribution 5.95 Total: 5.95 kcal Total: -7.65 -13.87 -21.52 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_13774300_15704122.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 71.850 kcal (2) G-P(sol) polarization free energy of solvation -7.652 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 64.197 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.866 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.519 kcal (6) G-S(sol) free energy of system = (1) + (5) 50.331 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.21 seconds