Wall clock time and date at job start Mon Mar 8 2021 04:37:14 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52998 * 1 3 3 C 1.52999 * 109.47159 * 2 1 4 4 C 1.53000 * 109.47284 * 240.00193 * 2 1 3 5 5 O 1.45194 * 109.47039 * 120.00091 * 2 1 3 6 6 C 1.34638 * 117.00320 * 60.00284 * 5 2 1 7 7 O 1.21516 * 119.99375 * 359.97438 * 6 5 2 8 8 N 1.34774 * 120.00641 * 179.97438 * 6 5 2 9 9 C 1.46496 * 120.00099 * 179.97438 * 8 6 5 10 10 H 1.08994 * 112.91109 * 23.75176 * 9 8 6 11 11 C 1.53787 * 113.61210 * 155.00440 * 9 8 6 12 12 C 1.53779 * 87.07963 * 139.97940 * 11 9 8 13 13 H 1.09007 * 113.61383 * 220.01369 * 12 11 9 14 14 N 1.46502 * 113.61301 * 89.11687 * 12 11 9 15 15 C 1.38413 * 119.99850 * 154.99899 * 14 12 11 16 16 N 1.32492 * 119.21518 * 359.72852 * 15 14 12 17 17 C 1.32274 * 120.73631 * 179.71815 * 16 15 14 18 18 C 1.38610 * 119.19901 * 0.54723 * 17 16 15 19 19 C 1.50699 * 120.72278 * 179.70764 * 18 17 16 20 20 O 1.42902 * 109.47135 * 120.01665 * 19 18 17 21 21 Si 1.86301 * 109.46930 * 0.02562 * 19 18 17 22 22 C 1.38602 * 118.55573 * 359.72496 * 18 17 16 23 23 N 1.32272 * 119.19843 * 0.02562 * 22 18 17 24 24 C 1.53779 * 87.08402 * 334.56577 * 12 11 9 25 25 H 1.08996 * 109.47601 * 299.99573 * 1 2 3 26 26 H 1.09008 * 109.47003 * 59.99972 * 1 2 3 27 27 H 1.09001 * 109.47089 * 179.97438 * 1 2 3 28 28 H 1.08998 * 109.47346 * 179.97438 * 3 2 1 29 29 H 1.09003 * 109.47568 * 300.00538 * 3 2 1 30 30 H 1.09002 * 109.46886 * 59.99891 * 3 2 1 31 31 H 1.09001 * 109.47166 * 300.00086 * 4 2 1 32 32 H 1.09008 * 109.47235 * 59.99977 * 4 2 1 33 33 H 1.09005 * 109.47250 * 179.97438 * 4 2 1 34 34 H 0.97002 * 119.99411 * 0.02562 * 8 6 5 35 35 H 1.08997 * 113.61028 * 254.52900 * 11 9 8 36 36 H 1.09000 * 113.61529 * 25.43039 * 11 9 8 37 37 H 0.96996 * 120.00397 * 334.99617 * 14 12 11 38 38 H 1.08002 * 120.39993 * 180.29752 * 17 16 15 39 39 H 1.08993 * 109.47089 * 240.01798 * 19 18 17 40 40 H 0.96700 * 113.99917 * 300.00111 * 20 19 18 41 41 H 1.48500 * 109.99903 * 180.02562 * 21 19 18 42 42 H 1.48502 * 110.00021 * 301.31695 * 21 19 18 43 43 H 1.07995 * 120.40044 * 180.02562 * 22 18 17 44 44 H 1.09002 * 113.61557 * 270.88569 * 24 12 11 45 45 H 1.09004 * 113.61501 * 139.97990 * 24 12 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0400 -0.7212 -1.2492 5 8 2.0139 -0.6845 1.1855 6 6 1.6523 -1.9723 1.3383 7 8 0.9509 -2.5094 0.5039 8 7 2.0680 -2.6658 2.4165 9 6 1.6739 -4.0669 2.5829 10 1 1.4197 -4.5511 1.6401 11 6 2.6474 -4.8817 3.4510 12 6 1.4101 -5.5543 4.0685 13 1 1.4902 -5.7126 5.1441 14 7 0.9715 -6.7515 3.3471 15 6 0.2530 -7.7331 4.0075 16 7 -0.0248 -7.5765 5.2935 17 6 -0.7142 -8.4929 5.9527 18 6 -1.1365 -9.6316 5.2847 19 6 -1.9183 -10.7006 6.0039 20 8 -3.1925 -10.8619 5.3772 21 14 -2.1601 -10.2025 7.7827 22 6 -0.8239 -9.7660 3.9411 23 7 -0.1356 -8.8097 3.3401 24 6 0.6283 -4.2855 3.6892 25 1 -0.3634 0.5137 0.8900 26 1 -0.3633 0.5139 -0.8900 27 1 -0.3633 -1.0277 -0.0005 28 1 3.1300 1.4425 0.0005 29 1 1.6766 1.9564 -0.8899 30 1 1.6766 1.9563 0.8900 31 1 1.6767 -1.7489 -1.2493 32 1 1.6767 -0.2073 -2.1393 33 1 3.1301 -0.7208 -1.2495 34 1 2.6276 -2.2369 3.0828 35 1 3.2757 -5.5644 2.8790 36 1 3.2137 -4.2757 4.1583 37 1 1.1845 -6.8564 2.4066 38 1 -0.9417 -8.3574 6.9997 39 1 -1.3707 -11.6420 5.9612 40 1 -3.7354 -10.0617 5.3783 41 1 -2.9293 -11.2488 8.5031 42 1 -0.8424 -10.0005 8.4371 43 1 -1.1385 -10.6408 3.3917 44 1 0.6426 -3.5165 4.4617 45 1 -0.3734 -4.4870 3.3096 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_13941012_12175864.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:37:14 Heat of formation + Delta-G solvation = -20.791209 kcal Electronic energy + Delta-G solvation = -27059.473276 eV Core-core repulsion = 23080.344108 eV Total energy + Delta-G solvation = -3979.129168 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 323.168 amu Computer time = 0.84 seconds Orbital eigenvalues (eV) -42.18009 -41.76301 -40.53515 -38.20520 -37.82952 -35.89618 -35.09087 -34.70555 -33.79278 -31.80282 -28.32183 -28.28040 -27.01587 -26.92663 -26.08685 -25.38105 -23.35427 -23.02162 -21.29058 -20.64973 -19.61113 -19.08606 -18.61050 -18.03163 -17.70777 -17.06757 -16.80699 -16.56308 -16.50874 -16.09021 -15.70194 -15.65109 -15.50120 -15.32705 -14.75670 -14.62131 -14.42539 -14.09853 -14.03506 -13.74283 -13.42436 -13.27011 -13.12968 -13.08829 -12.84243 -12.81874 -12.51267 -12.22944 -12.21254 -12.15156 -11.86935 -11.78624 -11.75543 -11.28838 -11.27100 -10.95651 -10.60563 -10.17292 -10.01336 -9.14430 -5.12292 0.04820 0.15271 1.20978 1.21224 1.53905 1.70770 1.87924 1.90921 2.79732 3.06775 3.14125 3.26405 3.37239 3.40090 3.59257 3.67706 3.70624 3.74588 3.78512 3.84141 3.90081 3.97963 4.19897 4.39302 4.47369 4.49314 4.54189 4.57235 4.63607 4.64059 4.70816 4.74358 4.78751 4.85520 4.91147 4.93782 4.93902 5.08946 5.21175 5.31072 5.37237 5.47155 5.60934 5.76323 5.97985 6.36002 6.42123 6.50381 7.27166 7.43217 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.184 4.184 2 C 0.137 3.863 3 C -0.142 4.142 4 C -0.184 4.184 5 O -0.365 6.365 6 C 0.650 3.350 7 O -0.566 6.566 8 N -0.701 5.701 9 C 0.139 3.861 10 H 0.118 0.882 11 C -0.154 4.154 12 C 0.141 3.859 13 H 0.118 0.882 14 N -0.679 5.679 15 C 0.570 3.430 16 N -0.560 5.560 17 C 0.198 3.802 18 C -0.293 4.293 19 C -0.046 4.046 20 O -0.541 6.541 21 Si 0.682 3.318 22 C 0.224 3.776 23 N -0.568 5.568 24 C -0.165 4.165 25 H 0.060 0.940 26 H 0.072 0.928 27 H 0.087 0.913 28 H 0.067 0.933 29 H 0.082 0.918 30 H 0.067 0.933 31 H 0.087 0.913 32 H 0.072 0.928 33 H 0.060 0.940 34 H 0.407 0.593 35 H 0.085 0.915 36 H 0.106 0.894 37 H 0.416 0.584 38 H 0.167 0.833 39 H 0.116 0.884 40 H 0.379 0.621 41 H -0.251 1.251 42 H -0.255 1.255 43 H 0.171 0.829 44 H 0.099 0.901 45 H 0.079 0.921 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.729 2.996 2.620 4.046 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.241 4.241 2 C 0.100 3.900 3 C -0.199 4.199 4 C -0.241 4.241 5 O -0.280 6.280 6 C 0.403 3.597 7 O -0.455 6.455 8 N -0.360 5.360 9 C 0.035 3.965 10 H 0.136 0.864 11 C -0.193 4.193 12 C 0.034 3.966 13 H 0.136 0.864 14 N -0.315 5.315 15 C 0.214 3.786 16 N -0.282 5.282 17 C 0.031 3.969 18 C -0.301 4.301 19 C -0.159 4.159 20 O -0.346 6.346 21 Si 0.584 3.416 22 C 0.055 3.945 23 N -0.289 5.289 24 C -0.206 4.206 25 H 0.079 0.921 26 H 0.091 0.909 27 H 0.106 0.894 28 H 0.086 0.914 29 H 0.101 0.899 30 H 0.086 0.914 31 H 0.106 0.894 32 H 0.091 0.909 33 H 0.079 0.921 34 H 0.243 0.757 35 H 0.104 0.896 36 H 0.124 0.876 37 H 0.254 0.746 38 H 0.183 0.817 39 H 0.133 0.867 40 H 0.227 0.773 41 H -0.175 1.175 42 H -0.180 1.180 43 H 0.188 0.812 44 H 0.117 0.883 45 H 0.097 0.903 Dipole moment (debyes) X Y Z Total from point charges 1.356 2.896 2.496 4.057 hybrid contribution 0.196 -0.726 -0.184 0.774 sum 1.552 2.171 2.312 3.531 Atomic orbital electron populations 1.22521 0.93845 1.05051 1.02706 1.22113 0.94444 0.91557 0.81862 1.21880 1.02323 0.92363 1.03342 1.22524 1.01590 1.03446 0.96564 1.86306 1.71479 1.23483 1.46731 1.18183 0.78688 0.80649 0.82133 1.90920 1.40848 1.70418 1.43303 1.44733 1.55503 1.12055 1.23676 1.22681 0.95546 0.79102 0.99180 0.86378 1.23832 0.97013 0.98900 0.99550 1.21610 0.93974 0.82961 0.98066 0.86427 1.43805 1.57220 1.17694 1.12783 1.19317 0.87410 0.86333 0.85541 1.67896 1.19702 1.32584 1.08032 1.22797 0.87982 0.87075 0.99067 1.21731 1.09601 1.00633 0.98177 1.24707 0.85162 0.99200 1.06800 1.86509 1.26762 1.39687 1.81614 0.94950 0.83985 0.88107 0.74578 1.22842 0.86197 0.94613 0.90804 1.67983 1.17992 1.03105 1.39805 1.24052 0.99761 0.97851 0.98894 0.92117 0.90942 0.89436 0.91399 0.89931 0.91394 0.89448 0.90932 0.92127 0.75742 0.89638 0.87567 0.74591 0.81663 0.86677 0.77324 1.17531 1.17997 0.81184 0.88291 0.90271 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.26 8.37 37.16 0.31 0.05 16 2 C 0.14 0.18 1.13 -90.62 -0.10 0.08 16 3 C -0.14 0.10 8.85 37.16 0.33 0.43 16 4 C -0.18 -0.25 8.37 37.16 0.31 0.06 16 5 O -0.37 -0.85 9.94 -40.32 -0.40 -1.25 16 6 C 0.65 1.71 8.06 54.05 0.44 2.14 16 7 O -0.57 -2.86 11.48 -19.28 -0.22 -3.08 16 8 N -0.70 0.41 5.36 -57.93 -0.31 0.10 16 9 C 0.14 -0.19 4.12 -67.12 -0.28 -0.46 16 10 H 0.12 0.03 7.47 -51.93 -0.39 -0.36 16 11 C -0.15 0.50 7.58 -25.92 -0.20 0.30 16 12 C 0.14 -0.24 4.33 -67.12 -0.29 -0.53 16 13 H 0.12 -0.14 7.37 -51.93 -0.38 -0.52 16 14 N -0.68 0.04 5.41 -55.00 -0.30 -0.25 16 15 C 0.57 1.18 8.43 -322.80 -2.72 -1.54 16 16 N -0.56 -0.92 9.13 -13.93 -0.13 -1.05 16 17 C 0.20 -0.03 9.92 -17.22 -0.17 -0.20 16 18 C -0.29 0.11 5.40 -104.35 -0.56 -0.45 16 19 C -0.05 0.07 2.85 36.01 0.10 0.17 16 20 O -0.54 0.48 12.79 -35.23 -0.45 0.03 16 21 Si 0.68 -1.48 29.87 -169.99 -5.08 -6.56 16 22 C 0.22 0.19 10.92 -17.23 -0.19 0.01 16 23 N -0.57 -1.45 10.46 -13.93 -0.15 -1.60 16 24 C -0.17 0.24 7.68 -25.92 -0.20 0.04 16 25 H 0.06 0.07 8.14 -51.93 -0.42 -0.35 16 26 H 0.07 0.01 8.14 -51.92 -0.42 -0.42 16 27 H 0.09 0.31 5.88 -51.93 -0.31 0.01 16 28 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 29 H 0.08 -0.16 8.14 -51.93 -0.42 -0.58 16 30 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 31 H 0.09 0.30 5.88 -51.93 -0.31 0.00 16 32 H 0.07 0.00 8.14 -51.92 -0.42 -0.42 16 33 H 0.06 0.07 8.14 -51.93 -0.42 -0.36 16 34 H 0.41 -1.13 8.84 -40.82 -0.36 -1.49 16 35 H 0.08 -0.27 8.14 -51.93 -0.42 -0.69 16 36 H 0.11 -0.50 8.12 -51.93 -0.42 -0.92 16 37 H 0.42 -0.32 8.82 -40.82 -0.36 -0.68 16 38 H 0.17 -0.44 5.04 -52.49 -0.26 -0.70 16 39 H 0.12 -0.14 7.96 -51.93 -0.41 -0.55 16 40 H 0.38 -1.69 8.70 45.56 0.40 -1.30 16 41 H -0.25 -0.31 7.11 56.52 0.40 0.09 16 42 H -0.26 0.00 7.11 56.52 0.40 0.40 16 43 H 0.17 -0.13 8.06 -52.49 -0.42 -0.55 16 44 H 0.10 -0.22 8.14 -51.93 -0.42 -0.65 16 45 H 0.08 0.03 8.14 -51.93 -0.42 -0.39 16 LS Contribution 368.20 15.07 5.55 5.55 Total: 0.00 -8.04 368.20 -11.35 -19.40 By element: Atomic # 1 Polarization: -4.73 SS G_CDS: -6.65 Total: -11.38 kcal Atomic # 6 Polarization: 3.31 SS G_CDS: -3.22 Total: 0.09 kcal Atomic # 7 Polarization: -1.92 SS G_CDS: -0.88 Total: -2.80 kcal Atomic # 8 Polarization: -3.22 SS G_CDS: -1.07 Total: -4.30 kcal Atomic # 14 Polarization: -1.48 SS G_CDS: -5.08 Total: -6.56 kcal Total LS contribution 5.55 Total: 5.55 kcal Total: -8.04 -11.35 -19.40 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_13941012_12175864.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -1.395 kcal (2) G-P(sol) polarization free energy of solvation -8.044 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -9.438 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.353 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.397 kcal (6) G-S(sol) free energy of system = (1) + (5) -20.791 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.84 seconds