Wall clock time and date at job start Mon Mar 8 2021 04:37:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53004 * 1 3 3 C 1.53004 * 109.47123 * 2 1 4 4 C 1.53004 * 109.47201 * 240.00206 * 2 1 3 5 5 O 1.45201 * 109.47345 * 120.00224 * 2 1 3 6 6 C 1.34630 * 117.00046 * 59.99605 * 5 2 1 7 7 O 1.21516 * 120.00250 * 0.02562 * 6 5 2 8 8 N 1.34784 * 120.00065 * 180.02562 * 6 5 2 9 9 C 1.46493 * 119.99864 * 179.72923 * 8 6 5 10 10 H 1.09000 * 112.85483 * 334.66378 * 9 8 6 11 11 C 1.53777 * 113.61833 * 105.86275 * 9 8 6 12 12 C 1.54054 * 86.98542 * 89.15903 * 11 9 8 13 13 H 1.09000 * 113.68870 * 270.87285 * 12 11 9 14 14 N 1.46501 * 113.61929 * 139.98409 * 12 11 9 15 15 C 1.38998 * 120.00400 * 107.50095 * 14 12 11 16 16 N 1.32401 * 119.70899 * 179.72512 * 15 14 12 17 17 C 1.31970 * 121.62208 * 179.71844 * 16 15 14 18 18 C 1.38017 * 120.85728 * 0.56034 * 17 16 15 19 19 C 1.50700 * 120.33714 * 179.74998 * 18 17 16 20 20 O 1.42903 * 109.47205 * 244.98159 * 19 18 17 21 21 Si 1.86299 * 109.46920 * 4.98282 * 19 18 17 22 22 C 1.38884 * 119.33092 * 359.72875 * 18 17 16 23 23 C 1.38296 * 118.50588 * 359.97438 * 22 18 17 24 24 C 1.53777 * 87.07820 * 25.43361 * 12 11 9 25 25 H 1.09004 * 109.46522 * 299.99848 * 1 2 3 26 26 H 1.08993 * 109.46822 * 59.99709 * 1 2 3 27 27 H 1.08997 * 109.46645 * 180.02562 * 1 2 3 28 28 H 1.08998 * 109.47093 * 179.97438 * 3 2 1 29 29 H 1.09003 * 109.47004 * 299.99872 * 3 2 1 30 30 H 1.08997 * 109.47133 * 59.99999 * 3 2 1 31 31 H 1.09006 * 109.46751 * 299.99920 * 4 2 1 32 32 H 1.08994 * 109.46964 * 59.99535 * 4 2 1 33 33 H 1.08998 * 109.47138 * 180.02562 * 4 2 1 34 34 H 0.97000 * 119.99339 * 0.02562 * 8 6 5 35 35 H 1.09001 * 113.61733 * 203.66099 * 11 9 8 36 36 H 1.09003 * 113.61313 * 334.56504 * 11 9 8 37 37 H 0.97004 * 119.99549 * 287.50728 * 14 12 11 38 38 H 1.08002 * 119.57311 * 180.29429 * 17 16 15 39 39 H 1.08995 * 109.47260 * 124.97879 * 19 18 17 40 40 H 0.96697 * 113.99785 * 59.99503 * 20 19 18 41 41 H 1.48490 * 110.00433 * 58.68154 * 21 19 18 42 42 H 1.48501 * 109.99992 * 180.02562 * 21 19 18 43 43 H 1.07997 * 120.74734 * 180.02562 * 22 18 17 44 44 H 1.08005 * 120.45657 * 179.97438 * 23 22 18 45 45 H 1.08998 * 113.61800 * 220.02412 * 24 12 11 46 46 H 1.08997 * 113.68973 * 89.12516 * 24 12 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0401 -0.7212 -1.2493 5 8 2.0141 -0.6845 1.1855 6 6 1.6523 -1.9723 1.3383 7 8 0.9516 -2.5097 0.5036 8 7 2.0673 -2.6654 2.4172 9 6 1.6688 -4.0649 2.5864 10 1 0.7382 -4.3052 2.0722 11 6 2.8023 -5.0663 2.3084 12 6 3.1727 -4.9360 3.7981 13 1 3.8806 -4.1334 4.0048 14 7 3.5546 -6.2057 4.4212 15 6 4.8847 -6.4498 4.7428 16 7 5.2225 -7.5971 5.3108 17 6 6.4743 -7.8705 5.6269 18 6 7.4810 -6.9579 5.3849 19 6 8.9057 -7.2800 5.7558 20 8 9.3452 -6.3856 6.7800 21 14 9.0041 -9.0332 6.3781 22 6 7.1679 -5.7398 4.7957 23 6 5.8485 -5.4840 4.4699 24 6 1.7067 -4.5439 4.0472 25 1 -0.3632 0.5138 0.8901 26 1 -0.3633 0.5139 -0.8899 27 1 -0.3632 -1.0277 0.0005 28 1 3.1300 1.4425 0.0005 29 1 1.6767 1.9564 -0.8900 30 1 1.6767 1.9563 0.8900 31 1 1.6767 -1.7489 -1.2493 32 1 1.6767 -0.2074 -2.1392 33 1 3.1300 -0.7216 -1.2490 34 1 2.6264 -2.2363 3.0836 35 1 2.4493 -6.0597 2.0316 36 1 3.5666 -4.6838 1.6320 37 1 2.8792 -6.8762 4.6092 38 1 6.7135 -8.8189 6.0849 39 1 9.5434 -7.1695 4.8788 40 1 8.8219 -6.4299 7.5920 41 1 8.5198 -9.9709 5.3335 42 1 10.4040 -9.3631 6.7478 43 1 7.9377 -5.0092 4.5957 44 1 5.5696 -4.5469 4.0110 45 1 1.5871 -3.7400 4.7735 46 1 1.0536 -5.3938 4.2451 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_13941012_13915762.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:37:18 Heat of formation + Delta-G solvation = -37.517719 kcal Electronic energy + Delta-G solvation = -27012.593215 eV Core-core repulsion = 23098.164642 eV Total energy + Delta-G solvation = -3914.428573 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 322.173 amu Computer time = 0.93 seconds Orbital eigenvalues (eV) -41.99010 -41.45062 -40.46069 -38.14751 -37.72931 -35.88873 -35.11997 -33.72773 -33.25048 -31.13733 -28.35494 -28.31524 -27.02629 -26.91628 -25.38288 -24.79250 -23.56902 -22.48695 -21.16004 -20.67636 -19.37519 -18.76428 -18.48130 -17.80831 -17.47062 -17.11532 -16.74123 -16.50618 -16.30551 -15.99060 -15.78882 -15.53850 -15.33389 -15.25019 -14.66802 -14.39289 -14.25559 -14.10194 -14.01440 -13.76020 -13.59733 -13.43736 -13.17430 -13.02276 -12.88638 -12.85667 -12.53605 -12.34275 -12.28875 -12.20881 -12.03093 -11.79768 -11.33348 -11.13905 -11.01816 -10.75093 -10.41273 -10.39312 -10.28693 -8.74160 -5.03532 0.22069 0.40509 1.08571 1.30770 1.63954 1.81074 1.98704 2.01903 2.81040 3.01714 3.14244 3.29229 3.46825 3.53730 3.63278 3.72053 3.74644 3.76912 3.80472 3.94254 3.94441 4.05905 4.28550 4.33272 4.44162 4.45554 4.50821 4.54094 4.57578 4.60653 4.65624 4.71456 4.75746 4.77579 4.82331 4.88008 4.90405 4.98801 5.06280 5.22433 5.30340 5.33851 5.42147 5.49047 5.55851 5.95024 6.32017 6.48052 6.58810 7.12887 7.36081 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.184 4.184 2 C 0.137 3.863 3 C -0.142 4.142 4 C -0.184 4.184 5 O -0.364 6.364 6 C 0.653 3.347 7 O -0.562 6.562 8 N -0.697 5.697 9 C 0.141 3.859 10 H 0.115 0.885 11 C -0.167 4.167 12 C 0.130 3.870 13 H 0.110 0.890 14 N -0.711 5.711 15 C 0.408 3.592 16 N -0.539 5.539 17 C 0.158 3.842 18 C -0.235 4.235 19 C -0.052 4.052 20 O -0.542 6.542 21 Si 0.680 3.320 22 C -0.005 4.005 23 C -0.239 4.239 24 C -0.150 4.150 25 H 0.060 0.940 26 H 0.072 0.928 27 H 0.087 0.913 28 H 0.067 0.933 29 H 0.082 0.918 30 H 0.067 0.933 31 H 0.087 0.913 32 H 0.072 0.928 33 H 0.060 0.940 34 H 0.406 0.594 35 H 0.100 0.900 36 H 0.078 0.922 37 H 0.408 0.592 38 H 0.155 0.845 39 H 0.112 0.888 40 H 0.378 0.622 41 H -0.256 1.256 42 H -0.253 1.253 43 H 0.135 0.865 44 H 0.132 0.868 45 H 0.086 0.914 46 H 0.107 0.893 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.427 2.177 2.251 3.441 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.241 4.241 2 C 0.101 3.899 3 C -0.199 4.199 4 C -0.242 4.242 5 O -0.279 6.279 6 C 0.407 3.593 7 O -0.451 6.451 8 N -0.356 5.356 9 C 0.035 3.965 10 H 0.133 0.867 11 C -0.208 4.208 12 C 0.023 3.977 13 H 0.128 0.872 14 N -0.342 5.342 15 C 0.173 3.827 16 N -0.256 5.256 17 C 0.000 4.000 18 C -0.241 4.241 19 C -0.164 4.164 20 O -0.348 6.348 21 Si 0.582 3.418 22 C -0.031 4.031 23 C -0.264 4.264 24 C -0.189 4.189 25 H 0.079 0.921 26 H 0.091 0.909 27 H 0.106 0.894 28 H 0.086 0.914 29 H 0.101 0.899 30 H 0.086 0.914 31 H 0.106 0.894 32 H 0.091 0.909 33 H 0.079 0.921 34 H 0.242 0.758 35 H 0.119 0.881 36 H 0.097 0.903 37 H 0.244 0.756 38 H 0.172 0.828 39 H 0.129 0.871 40 H 0.226 0.774 41 H -0.181 1.181 42 H -0.178 1.178 43 H 0.153 0.847 44 H 0.150 0.850 45 H 0.105 0.895 46 H 0.125 0.875 Dipole moment (debyes) X Y Z Total from point charges -1.684 0.917 1.288 2.310 hybrid contribution 0.653 0.976 -0.404 1.242 sum -1.030 1.893 0.885 2.330 Atomic orbital electron populations 1.22526 0.93786 1.05061 1.02777 1.22137 0.94479 0.91553 0.81773 1.21884 1.02350 0.92311 1.03387 1.22526 1.01617 1.03456 0.96564 1.86304 1.71452 1.23312 1.46834 1.18056 0.78586 0.80599 0.82075 1.90930 1.40773 1.70489 1.42902 1.44362 1.55579 1.11702 1.23918 1.21595 0.99292 0.78513 0.97062 0.86742 1.24136 0.99022 1.00543 0.97069 1.22724 0.95930 0.86334 0.92667 0.87202 1.44486 1.04792 1.18850 1.66091 1.18424 0.85904 0.89180 0.89238 1.67146 1.20821 1.19810 1.17804 1.22192 0.86737 0.97484 0.93564 1.20994 0.97256 0.97442 1.08369 1.24783 0.92423 1.05375 0.93843 1.86496 1.58578 1.63489 1.26200 0.94912 0.83877 0.74672 0.88331 1.21196 0.95593 0.95281 0.91014 1.21467 0.93347 1.01329 1.10252 1.23770 0.96282 1.02537 0.96315 0.92081 0.90877 0.89427 0.91381 0.89882 0.91364 0.89421 0.90878 0.92112 0.75839 0.88118 0.90296 0.75581 0.82809 0.87104 0.77439 1.18073 1.17797 0.84694 0.84985 0.89545 0.87460 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.16 8.37 37.16 0.31 0.15 16 2 C 0.14 0.12 1.13 -90.61 -0.10 0.02 16 3 C -0.14 0.15 8.85 37.16 0.33 0.48 16 4 C -0.18 -0.18 8.37 37.16 0.31 0.13 16 5 O -0.36 -0.63 9.94 -40.30 -0.40 -1.03 16 6 C 0.65 1.26 8.06 54.06 0.44 1.70 16 7 O -0.56 -2.46 11.50 -19.28 -0.22 -2.68 16 8 N -0.70 0.91 5.27 -57.93 -0.31 0.60 16 9 C 0.14 -0.30 4.29 -67.12 -0.29 -0.59 16 10 H 0.11 -0.08 7.50 -51.93 -0.39 -0.47 16 11 C -0.17 0.37 7.70 -25.78 -0.20 0.17 16 12 C 0.13 -0.40 3.92 -66.98 -0.26 -0.66 16 13 H 0.11 -0.40 6.10 -51.93 -0.32 -0.72 16 14 N -0.71 0.89 5.53 -53.00 -0.29 0.60 16 15 C 0.41 0.43 7.65 -155.02 -1.19 -0.75 16 16 N -0.54 -1.22 10.39 -12.44 -0.13 -1.35 16 17 C 0.16 0.13 9.84 -17.57 -0.17 -0.04 16 18 C -0.24 -0.09 5.36 -104.46 -0.56 -0.65 16 19 C -0.05 0.01 2.82 36.01 0.10 0.12 16 20 O -0.54 -0.07 12.84 -35.23 -0.45 -0.52 16 21 Si 0.68 -0.68 29.83 -169.99 -5.07 -5.75 16 22 C -0.01 0.00 9.83 -39.32 -0.39 -0.39 16 23 C -0.24 -0.05 9.29 -39.22 -0.36 -0.41 16 24 C -0.15 0.60 7.57 -25.92 -0.20 0.40 16 25 H 0.06 0.04 8.14 -51.93 -0.42 -0.39 16 26 H 0.07 -0.03 8.14 -51.93 -0.42 -0.45 16 27 H 0.09 0.26 5.88 -51.93 -0.31 -0.05 16 28 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 29 H 0.08 -0.19 8.14 -51.93 -0.42 -0.61 16 30 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 31 H 0.09 0.27 5.88 -51.93 -0.31 -0.04 16 32 H 0.07 -0.02 8.14 -51.93 -0.42 -0.44 16 33 H 0.06 0.05 8.14 -51.93 -0.42 -0.38 16 34 H 0.41 -1.36 8.82 -40.82 -0.36 -1.72 16 35 H 0.10 -0.21 8.14 -51.93 -0.42 -0.63 16 36 H 0.08 -0.08 8.14 -51.93 -0.42 -0.50 16 37 H 0.41 -0.72 8.85 -40.82 -0.36 -1.08 16 38 H 0.16 -0.20 4.91 -52.49 -0.26 -0.46 16 39 H 0.11 0.01 7.96 -51.93 -0.41 -0.40 16 40 H 0.38 -1.36 8.70 45.56 0.40 -0.97 16 41 H -0.26 -0.38 7.11 56.52 0.40 0.02 16 42 H -0.25 -0.56 7.11 56.52 0.40 -0.16 16 43 H 0.14 -0.09 8.06 -52.49 -0.42 -0.51 16 44 H 0.13 -0.22 6.04 -52.48 -0.32 -0.53 16 45 H 0.09 -0.37 8.14 -51.93 -0.42 -0.80 16 46 H 0.11 -0.50 8.12 -51.93 -0.42 -0.92 16 LS Contribution 370.80 15.07 5.59 5.59 Total: 0.00 -7.67 370.80 -10.41 -18.09 By element: Atomic # 1 Polarization: -6.31 SS G_CDS: -6.90 Total: -13.21 kcal Atomic # 6 Polarization: 1.89 SS G_CDS: -2.23 Total: -0.34 kcal Atomic # 7 Polarization: 0.58 SS G_CDS: -0.73 Total: -0.15 kcal Atomic # 8 Polarization: -3.16 SS G_CDS: -1.07 Total: -4.23 kcal Atomic # 14 Polarization: -0.68 SS G_CDS: -5.07 Total: -5.75 kcal Total LS contribution 5.59 Total: 5.59 kcal Total: -7.67 -10.41 -18.09 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_13941012_13915762.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -19.430 kcal (2) G-P(sol) polarization free energy of solvation -7.674 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -27.104 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.414 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.088 kcal (6) G-S(sol) free energy of system = (1) + (5) -37.518 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.93 seconds