Wall clock time and date at job start Mon Mar 8 2021 04:37:26 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50704 * 1 3 3 C 1.33332 * 125.94851 * 2 1 4 4 C 1.50693 * 122.71124 * 359.96176 * 3 2 1 5 5 O 1.42900 * 109.47403 * 113.28172 * 4 3 2 6 6 Si 1.86298 * 109.47296 * 233.28680 * 4 3 2 7 7 N 1.32116 * 114.57702 * 179.69824 * 3 2 1 8 8 C 1.29687 * 116.86585 * 0.26007 * 7 3 2 9 9 N 1.38610 * 124.94649 * 179.97438 * 8 7 3 10 10 C 1.46508 * 119.99715 * 180.02562 * 9 8 7 11 11 H 1.08999 * 112.85125 * 25.33781 * 10 9 8 12 12 C 1.53779 * 113.61267 * 156.53499 * 10 9 8 13 13 C 1.53779 * 87.08197 * 139.98113 * 12 10 9 14 14 H 1.09000 * 113.61269 * 219.93415 * 13 12 10 15 15 N 1.46494 * 113.61412 * 89.11443 * 13 12 10 16 16 C 1.34779 * 119.99894 * 154.99829 * 15 13 12 17 17 O 1.21508 * 120.00058 * 0.02562 * 16 15 13 18 18 O 1.34635 * 119.99875 * 179.97438 * 16 15 13 19 19 C 1.45210 * 117.00014 * 180.02562 * 18 16 15 20 20 C 1.53002 * 109.47037 * 60.00172 * 19 18 16 21 21 C 1.52990 * 109.47117 * 180.02562 * 19 18 16 22 22 C 1.53004 * 109.46759 * 300.00568 * 19 18 16 23 23 C 1.53781 * 113.61114 * 254.13958 * 10 9 8 24 24 S 1.70961 * 110.10455 * 0.02562 * 8 7 3 25 25 H 1.09001 * 109.47277 * 84.91747 * 1 2 3 26 26 H 1.09001 * 109.46610 * 204.91388 * 1 2 3 27 27 H 1.09004 * 109.47045 * 324.91538 * 1 2 3 28 28 H 1.09010 * 109.47332 * 353.28435 * 4 3 2 29 29 H 0.96699 * 114.00015 * 180.02562 * 5 4 3 30 30 H 1.48496 * 109.99733 * 299.99791 * 6 4 3 31 31 H 1.48502 * 110.00190 * 61.31736 * 6 4 3 32 32 H 0.96998 * 120.00060 * 0.02562 * 9 8 7 33 33 H 1.09001 * 113.61294 * 254.53416 * 12 10 9 34 34 H 1.09008 * 113.61459 * 25.34450 * 12 10 9 35 35 H 0.96999 * 120.00249 * 335.00416 * 15 13 12 36 36 H 1.08999 * 109.46941 * 60.00116 * 20 19 18 37 37 H 1.08993 * 109.46999 * 180.02562 * 20 19 18 38 38 H 1.09004 * 109.47282 * 300.00488 * 20 19 18 39 39 H 1.09000 * 109.47645 * 59.99839 * 21 19 18 40 40 H 1.09003 * 109.47341 * 179.97438 * 21 19 18 41 41 H 1.08999 * 109.47175 * 300.00076 * 21 19 18 42 42 H 1.08998 * 109.47554 * 59.99902 * 22 19 18 43 43 H 1.09003 * 109.46718 * 180.02562 * 22 19 18 44 44 H 1.09000 * 109.46723 * 299.99377 * 22 19 18 45 45 H 1.08996 * 113.62063 * 334.56995 * 23 10 9 46 46 H 1.08998 * 113.61165 * 105.47799 * 23 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2898 1.0794 0.0000 4 6 1.7414 2.4830 -0.0008 5 8 2.0634 3.1210 1.2366 6 14 2.4942 3.4430 -1.4088 7 7 3.5850 0.8189 0.0063 8 6 3.9315 -0.4308 0.0064 9 7 5.2384 -0.8924 0.0120 10 6 5.5066 -2.3328 0.0109 11 1 4.6937 -2.9143 -0.4239 12 6 6.8927 -2.7008 -0.5440 13 6 6.9758 -3.7505 0.5768 14 1 7.9628 -3.8245 1.0334 15 7 6.4233 -5.0544 0.2017 16 6 6.8493 -6.1712 0.8245 17 8 7.6913 -6.0965 1.6974 18 8 6.3411 -7.3695 0.4801 19 6 6.8460 -8.5292 1.1933 20 6 6.5573 -8.3744 2.6878 21 6 6.1572 -9.7904 0.6683 22 6 8.3560 -8.6447 0.9748 23 6 5.9913 -2.8701 1.3679 24 16 2.5414 -1.4260 -0.0028 25 1 -0.3634 0.0910 -1.0236 26 1 -0.3632 -0.9321 0.4329 27 1 -0.3633 0.8410 0.5907 28 1 0.6585 2.4500 -0.1216 29 1 1.7403 4.0297 1.3063 30 1 3.9703 3.4954 -1.2558 31 1 2.1399 2.8077 -2.7035 32 1 5.9755 -0.2619 0.0167 33 1 6.8620 -3.1319 -1.5447 34 1 7.6272 -1.9008 -0.4502 35 1 5.7509 -5.1141 -0.4949 36 1 5.4816 -8.2921 2.8435 37 1 6.9367 -9.2447 3.2232 38 1 7.0483 -7.4758 3.0616 39 1 6.3632 -9.9006 -0.3964 40 1 6.5365 -10.6611 1.2033 41 1 5.0815 -9.7083 0.8236 42 1 8.8470 -7.7462 1.3486 43 1 8.7349 -9.5155 1.5098 44 1 8.5616 -8.7550 -0.0899 45 1 6.4791 -2.1170 1.9867 46 1 5.2339 -3.4377 1.9084 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_13941012_15704122.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:37:26 Heat of formation + Delta-G solvation = -34.423533 kcal Electronic energy + Delta-G solvation = -27590.456623 eV Core-core repulsion = 23609.776851 eV Total energy + Delta-G solvation = -3980.679772 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 342.145 amu Computer time = 1.01 seconds Orbital eigenvalues (eV) -41.97044 -41.07377 -40.55857 -38.07793 -37.47083 -36.02675 -35.15888 -33.84276 -32.55557 -29.10975 -28.35706 -28.31673 -27.09302 -26.24568 -25.49157 -24.13969 -23.65335 -21.20421 -21.17987 -19.95442 -19.43831 -19.05305 -18.34343 -17.69251 -17.48919 -17.18565 -16.82032 -16.68665 -16.12894 -15.67945 -15.56325 -15.36491 -15.28849 -14.98672 -14.46043 -14.41542 -14.18905 -13.99409 -13.93955 -13.76189 -13.56760 -13.47321 -13.30151 -13.14341 -12.90120 -12.86822 -12.85912 -12.54093 -12.29963 -12.21792 -12.13048 -11.90921 -11.73568 -11.33987 -11.07532 -11.02878 -10.55130 -10.33321 -10.31717 -9.99570 -8.66730 -4.92347 -0.02351 0.16070 0.72581 1.06534 1.34017 1.75298 1.79270 1.85219 1.94711 2.28201 2.97959 3.06255 3.17513 3.45407 3.54462 3.59068 3.72115 3.74371 3.80149 3.94001 4.03086 4.16441 4.20979 4.37218 4.37880 4.39619 4.49275 4.53843 4.58935 4.60286 4.60498 4.74751 4.75648 4.77250 4.86219 4.87812 4.88757 4.90283 5.05817 5.15246 5.22474 5.33698 5.41194 5.52695 5.58621 6.23934 6.30205 6.68354 6.96988 7.34320 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.071 4.071 2 C -0.247 4.247 3 C 0.114 3.886 4 C -0.035 4.035 5 O -0.539 6.539 6 Si 0.702 3.298 7 N -0.535 5.535 8 C 0.315 3.685 9 N -0.683 5.683 10 C 0.125 3.875 11 H 0.107 0.893 12 C -0.147 4.147 13 C 0.142 3.858 14 H 0.119 0.881 15 N -0.698 5.698 16 C 0.654 3.346 17 O -0.562 6.562 18 O -0.364 6.364 19 C 0.137 3.863 20 C -0.185 4.185 21 C -0.142 4.142 22 C -0.184 4.184 23 C -0.166 4.166 24 S 0.107 5.893 25 H 0.074 0.926 26 H 0.070 0.930 27 H 0.081 0.919 28 H 0.079 0.921 29 H 0.382 0.618 30 H -0.246 1.246 31 H -0.265 1.265 32 H 0.414 0.586 33 H 0.089 0.911 34 H 0.110 0.890 35 H 0.407 0.593 36 H 0.060 0.940 37 H 0.072 0.928 38 H 0.087 0.913 39 H 0.067 0.933 40 H 0.083 0.917 41 H 0.067 0.933 42 H 0.087 0.913 43 H 0.072 0.928 44 H 0.060 0.940 45 H 0.104 0.896 46 H 0.082 0.918 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.848 -0.229 -2.255 3.640 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.130 4.130 2 C -0.370 4.370 3 C -0.016 4.016 4 C -0.147 4.147 5 O -0.345 6.345 6 Si 0.602 3.398 7 N -0.260 5.260 8 C -0.057 4.057 9 N -0.323 5.323 10 C 0.019 3.981 11 H 0.124 0.876 12 C -0.186 4.186 13 C 0.037 3.963 14 H 0.137 0.863 15 N -0.356 5.356 16 C 0.408 3.592 17 O -0.450 6.450 18 O -0.279 6.279 19 C 0.101 3.899 20 C -0.242 4.242 21 C -0.199 4.199 22 C -0.242 4.242 23 C -0.207 4.207 24 S 0.356 5.644 25 H 0.092 0.908 26 H 0.089 0.911 27 H 0.099 0.901 28 H 0.097 0.903 29 H 0.230 0.770 30 H -0.170 1.170 31 H -0.190 1.190 32 H 0.253 0.747 33 H 0.107 0.893 34 H 0.128 0.872 35 H 0.242 0.758 36 H 0.079 0.921 37 H 0.091 0.909 38 H 0.106 0.894 39 H 0.086 0.914 40 H 0.101 0.899 41 H 0.086 0.914 42 H 0.106 0.894 43 H 0.091 0.909 44 H 0.079 0.921 45 H 0.122 0.878 46 H 0.101 0.899 Dipole moment (debyes) X Y Z Total from point charges -1.309 -1.772 -2.374 3.238 hybrid contribution -0.365 0.400 -0.040 0.543 sum -1.673 -1.371 -2.414 3.241 Atomic orbital electron populations 1.20198 0.86603 1.03436 1.02766 1.25133 1.01267 0.93166 1.17470 1.18953 0.86632 0.94677 1.01348 1.24246 1.01845 0.91684 0.96960 1.86531 1.81366 1.31385 1.35213 0.96108 0.82283 0.86526 0.74889 1.66096 1.17475 1.16439 1.25983 1.23379 0.92037 0.91462 0.98827 1.43936 1.01769 1.06482 1.80135 1.22795 0.97853 0.79661 0.97753 0.87552 1.23761 0.96412 0.98763 0.99674 1.21615 0.98793 0.79705 0.96195 0.86326 1.44359 1.45663 1.03724 1.41893 1.18036 0.79759 0.81054 0.80376 1.90930 1.34543 1.86475 1.33071 1.86309 1.64502 1.14470 1.62589 1.22143 0.94403 0.81729 0.91674 1.22526 1.02587 1.04822 0.94238 1.21882 1.01364 0.94336 1.02351 1.22529 0.94349 1.04703 1.02579 1.24145 0.99894 0.99483 0.97203 1.83837 0.96538 1.10105 1.73926 0.90777 0.91090 0.90077 0.90348 0.77031 1.17005 1.19002 0.74719 0.89286 0.87175 0.75827 0.92078 0.90858 0.89417 0.91371 0.89865 0.91360 0.89426 0.90858 0.92088 0.87755 0.89928 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.07 0.01 9.71 36.01 0.35 0.36 16 2 C -0.25 -0.72 6.57 -36.02 -0.24 -0.96 16 3 C 0.11 0.51 5.22 -84.19 -0.44 0.07 16 4 C -0.03 -0.06 2.82 36.00 0.10 0.04 16 5 O -0.54 -1.11 12.86 -35.23 -0.45 -1.57 16 6 Si 0.70 0.74 32.62 -169.99 -5.54 -4.80 16 7 N -0.53 -3.05 9.77 -11.37 -0.11 -3.16 16 8 C 0.31 1.04 8.24 -87.68 -0.72 0.32 16 9 N -0.68 -0.24 5.52 -54.99 -0.30 -0.54 16 10 C 0.13 -0.25 4.07 -67.11 -0.27 -0.52 16 11 H 0.11 -0.24 7.11 -51.93 -0.37 -0.61 16 12 C -0.15 0.50 7.58 -25.92 -0.20 0.30 16 13 C 0.14 -0.25 4.33 -67.03 -0.29 -0.54 16 14 H 0.12 -0.07 7.46 -51.93 -0.39 -0.45 16 15 N -0.70 0.62 5.26 -57.84 -0.30 0.32 16 16 C 0.65 1.43 8.06 54.06 0.44 1.86 16 17 O -0.56 -2.55 11.48 -19.28 -0.22 -2.77 16 18 O -0.36 -0.71 9.94 -40.31 -0.40 -1.11 16 19 C 0.14 0.14 1.13 -90.62 -0.10 0.04 16 20 C -0.18 -0.21 8.37 37.16 0.31 0.10 16 21 C -0.14 0.13 8.85 37.15 0.33 0.46 16 22 C -0.18 -0.19 8.37 37.16 0.31 0.12 16 23 C -0.17 0.26 7.69 -25.83 -0.20 0.06 16 24 S 0.11 0.20 21.71 -107.50 -2.33 -2.14 16 25 H 0.07 -0.09 8.14 -51.93 -0.42 -0.51 16 26 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 27 H 0.08 -0.07 7.18 -51.93 -0.37 -0.45 16 28 H 0.08 -0.07 6.34 -51.92 -0.33 -0.40 16 29 H 0.38 -1.36 8.74 45.56 0.40 -0.96 16 30 H -0.25 -1.31 7.11 56.52 0.40 -0.91 16 31 H -0.26 -1.00 7.11 56.52 0.40 -0.60 16 32 H 0.41 -0.11 8.84 -40.82 -0.36 -0.47 16 33 H 0.09 -0.34 8.14 -51.93 -0.42 -0.77 16 34 H 0.11 -0.46 8.11 -51.92 -0.42 -0.89 16 35 H 0.41 -1.15 8.81 -40.82 -0.36 -1.51 16 36 H 0.06 0.05 8.14 -51.93 -0.42 -0.37 16 37 H 0.07 -0.01 8.14 -51.93 -0.42 -0.44 16 38 H 0.09 0.28 5.88 -51.93 -0.31 -0.02 16 39 H 0.07 -0.07 8.14 -51.93 -0.42 -0.49 16 40 H 0.08 -0.18 8.14 -51.93 -0.42 -0.60 16 41 H 0.07 -0.07 8.14 -51.93 -0.42 -0.49 16 42 H 0.09 0.27 5.88 -51.93 -0.31 -0.04 16 43 H 0.07 -0.02 8.14 -51.93 -0.42 -0.44 16 44 H 0.06 0.05 8.14 -51.93 -0.42 -0.38 16 45 H 0.10 -0.16 8.14 -51.93 -0.42 -0.58 16 46 H 0.08 -0.04 8.14 -51.93 -0.42 -0.47 16 LS Contribution 386.44 15.07 5.82 5.82 Total: 0.00 -10.01 386.44 -11.55 -21.57 By element: Atomic # 1 Polarization: -6.26 SS G_CDS: -7.08 Total: -13.34 kcal Atomic # 6 Polarization: 2.35 SS G_CDS: -0.62 Total: 1.73 kcal Atomic # 7 Polarization: -2.67 SS G_CDS: -0.72 Total: -3.39 kcal Atomic # 8 Polarization: -4.38 SS G_CDS: -1.07 Total: -5.45 kcal Atomic # 14 Polarization: 0.74 SS G_CDS: -5.54 Total: -4.80 kcal Atomic # 16 Polarization: 0.20 SS G_CDS: -2.33 Total: -2.14 kcal Total LS contribution 5.82 Total: 5.82 kcal Total: -10.01 -11.55 -21.57 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_13941012_15704122.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -12.856 kcal (2) G-P(sol) polarization free energy of solvation -10.014 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -22.870 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.554 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.568 kcal (6) G-S(sol) free energy of system = (1) + (5) -34.424 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.01 seconds