Wall clock time and date at job start Mon Mar 8 2021 04:37:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52996 * 1 3 3 C 1.53007 * 109.46837 * 2 1 4 4 C 1.52997 * 109.47273 * 240.00301 * 2 1 3 5 5 O 1.45199 * 109.47473 * 120.00152 * 2 1 3 6 6 C 1.34634 * 116.99915 * 59.99711 * 5 2 1 7 7 O 1.21511 * 119.99930 * 0.02562 * 6 5 2 8 8 N 1.34774 * 119.99961 * 180.02562 * 6 5 2 9 9 C 1.46506 * 120.00121 * 180.02562 * 8 6 5 10 10 H 1.08999 * 112.84379 * 336.20036 * 9 8 6 11 11 C 1.54054 * 113.61516 * 107.50792 * 9 8 6 12 12 C 1.53782 * 86.98346 * 139.98346 * 11 9 8 13 13 H 1.09000 * 113.61200 * 219.98229 * 12 11 9 14 14 N 1.46495 * 113.61557 * 89.15865 * 12 11 9 15 15 C 1.39142 * 120.00111 * 105.86691 * 14 12 11 16 16 N 1.32338 * 119.71571 * 359.97438 * 15 14 12 17 17 C 1.32010 * 121.64695 * 179.68964 * 16 15 14 18 18 C 1.37990 * 120.89981 * 0.61849 * 17 16 15 19 19 C 1.50699 * 120.32692 * 179.68671 * 18 17 16 20 20 O 1.42892 * 109.47249 * 119.73026 * 19 18 17 21 21 Si 1.86298 * 109.47032 * 359.72412 * 19 18 17 22 22 C 1.38907 * 119.34206 * 359.41654 * 18 17 16 23 23 C 1.38441 * 118.48759 * 0.27019 * 22 18 17 24 24 F 1.35097 * 120.47033 * 180.02562 * 23 22 18 25 25 C 1.53773 * 113.61633 * 205.00408 * 9 8 6 26 26 H 1.09008 * 109.47456 * 299.99805 * 1 2 3 27 27 H 1.09005 * 109.47374 * 59.99935 * 1 2 3 28 28 H 1.09001 * 109.47318 * 179.97438 * 1 2 3 29 29 H 1.09006 * 109.47022 * 179.97438 * 3 2 1 30 30 H 1.08996 * 109.46955 * 299.99973 * 3 2 1 31 31 H 1.09002 * 109.46984 * 60.00583 * 3 2 1 32 32 H 1.08995 * 109.47349 * 299.99969 * 4 2 1 33 33 H 1.09005 * 109.47113 * 59.99605 * 4 2 1 34 34 H 1.09002 * 109.47051 * 179.97438 * 4 2 1 35 35 H 0.96998 * 120.00132 * 0.02562 * 8 6 5 36 36 H 1.08991 * 113.61505 * 25.47477 * 11 9 8 37 37 H 1.09004 * 113.69117 * 254.49516 * 11 9 8 38 38 H 0.97004 * 120.00266 * 285.85590 * 14 12 11 39 39 H 1.08003 * 119.55300 * 180.33867 * 17 16 15 40 40 H 1.09004 * 109.46453 * 239.73094 * 19 18 17 41 41 H 0.96703 * 114.00176 * 299.99748 * 20 19 18 42 42 H 1.48506 * 109.99834 * 58.68765 * 21 19 18 43 43 H 1.48502 * 110.00011 * 180.02562 * 21 19 18 44 44 H 1.08005 * 120.75083 * 180.29207 * 22 18 17 45 45 H 1.08993 * 113.61707 * 105.46807 * 25 9 8 46 46 H 1.09003 * 113.69142 * 334.57894 * 25 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0399 1.4426 0.0000 4 6 2.0400 -0.7212 -1.2492 5 8 2.0140 -0.6845 1.1855 6 6 1.6523 -1.9723 1.3383 7 8 0.9516 -2.5096 0.5035 8 7 2.0673 -2.6654 2.4170 9 6 1.6741 -4.0669 2.5830 10 1 0.7602 -4.3167 2.0441 11 6 2.8250 -5.0631 2.3452 12 6 2.2740 -5.8596 3.5397 13 1 3.0498 -6.2648 4.1894 14 7 1.2669 -6.8558 3.1664 15 6 1.5940 -8.2082 3.1628 16 7 2.8167 -8.5883 3.4972 17 6 3.1665 -9.8611 3.5126 18 6 2.2662 -10.8477 3.1658 19 6 2.6813 -12.2963 3.1812 20 8 1.8626 -13.0167 4.1045 21 14 4.4656 -12.4254 3.7013 22 6 0.9718 -10.4928 2.8079 23 6 0.6315 -9.1508 2.8068 24 9 -0.6163 -8.7608 2.4659 25 6 1.6742 -4.5375 4.0470 26 1 -0.3634 0.5138 0.8900 27 1 -0.3634 0.5139 -0.8900 28 1 -0.3634 -1.0277 -0.0005 29 1 3.1300 1.4426 0.0005 30 1 1.6766 1.9564 -0.8900 31 1 1.6766 1.9564 0.8901 32 1 1.6767 -1.7488 -1.2493 33 1 1.6766 -0.2073 -2.1392 34 1 3.1300 -0.7207 -1.2494 35 1 2.6263 -2.2363 3.0836 36 1 3.8132 -4.6387 2.5218 37 1 2.7549 -5.5948 1.3962 38 1 0.3719 -6.5727 2.9218 39 1 4.1723 -10.1338 3.7962 40 1 2.5623 -12.7189 2.1835 41 1 1.9186 -12.6942 5.0145 42 1 4.6472 -11.8238 5.0469 43 1 4.8875 -13.8491 3.7198 44 1 0.2473 -11.2466 2.5370 45 1 0.6759 -4.6452 4.4711 46 1 2.3480 -3.9704 4.6893 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_13941012_17656566.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:37:30 Heat of formation + Delta-G solvation = -82.973766 kcal Electronic energy + Delta-G solvation = -29495.381658 eV Core-core repulsion = 25109.527987 eV Total energy + Delta-G solvation = -4385.853671 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 340.163 amu Computer time = 1.00 seconds Orbital eigenvalues (eV) -49.87672 -41.87860 -41.46204 -40.43313 -38.24370 -37.81390 -35.87868 -35.08359 -33.80547 -33.13226 -31.08101 -28.32247 -28.28152 -26.96363 -26.83862 -25.99490 -24.69104 -23.08146 -22.97918 -21.26393 -20.61358 -19.53790 -19.05372 -18.64747 -18.26392 -17.67930 -17.56992 -17.07741 -16.97709 -16.74447 -16.45397 -16.17526 -15.92769 -15.61328 -15.47060 -15.33667 -14.92697 -14.71367 -14.44269 -14.33475 -14.06339 -13.93158 -13.72466 -13.49013 -13.40796 -13.16517 -13.05702 -12.84318 -12.81952 -12.69941 -12.50171 -12.22859 -12.14255 -12.06054 -11.76538 -11.29038 -11.28013 -10.95729 -10.81813 -10.64513 -10.55567 -10.16088 -8.82075 -5.02360 -0.08994 0.09486 1.20331 1.21131 1.52890 1.84611 1.87961 1.91315 2.51900 3.01265 3.10643 3.17929 3.29533 3.32321 3.39902 3.53426 3.73414 3.78284 3.80919 3.84087 3.86685 3.96879 3.97877 4.39122 4.41897 4.44981 4.50209 4.54645 4.57273 4.63500 4.66867 4.71347 4.72773 4.78638 4.85694 4.92739 4.93757 4.94457 4.95979 5.08964 5.25770 5.37088 5.38762 5.47467 5.60916 5.90935 6.11175 6.33691 6.41962 6.91085 7.43251 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.184 4.184 2 C 0.137 3.863 3 C -0.142 4.142 4 C -0.184 4.184 5 O -0.365 6.365 6 C 0.650 3.350 7 O -0.566 6.566 8 N -0.701 5.701 9 C 0.139 3.861 10 H 0.117 0.883 11 C -0.165 4.165 12 C 0.139 3.861 13 H 0.116 0.884 14 N -0.701 5.701 15 C 0.393 3.607 16 N -0.510 5.510 17 C 0.148 3.852 18 C -0.206 4.206 19 C -0.062 4.062 20 O -0.530 6.530 21 Si 0.682 3.318 22 C -0.038 4.038 23 C -0.018 4.018 24 F -0.133 7.133 25 C -0.155 4.155 26 H 0.060 0.940 27 H 0.072 0.928 28 H 0.087 0.913 29 H 0.067 0.933 30 H 0.082 0.918 31 H 0.067 0.933 32 H 0.087 0.913 33 H 0.072 0.928 34 H 0.060 0.940 35 H 0.407 0.593 36 H 0.098 0.902 37 H 0.079 0.921 38 H 0.414 0.586 39 H 0.164 0.836 40 H 0.121 0.879 41 H 0.376 0.624 42 H -0.256 1.256 43 H -0.254 1.254 44 H 0.150 0.850 45 H 0.084 0.916 46 H 0.105 0.895 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.179 2.242 1.296 4.100 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.241 4.241 2 C 0.100 3.900 3 C -0.199 4.199 4 C -0.241 4.241 5 O -0.280 6.280 6 C 0.403 3.597 7 O -0.455 6.455 8 N -0.360 5.360 9 C 0.035 3.965 10 H 0.135 0.865 11 C -0.205 4.205 12 C 0.032 3.968 13 H 0.134 0.866 14 N -0.334 5.334 15 C 0.155 3.845 16 N -0.226 5.226 17 C -0.010 4.010 18 C -0.212 4.212 19 C -0.173 4.173 20 O -0.336 6.336 21 Si 0.583 3.417 22 C -0.064 4.064 23 C -0.044 4.044 24 F -0.112 7.112 25 C -0.194 4.194 26 H 0.079 0.921 27 H 0.091 0.909 28 H 0.105 0.895 29 H 0.086 0.914 30 H 0.101 0.899 31 H 0.086 0.914 32 H 0.106 0.894 33 H 0.091 0.909 34 H 0.079 0.921 35 H 0.242 0.758 36 H 0.116 0.884 37 H 0.097 0.903 38 H 0.251 0.749 39 H 0.181 0.819 40 H 0.138 0.862 41 H 0.224 0.776 42 H -0.181 1.181 43 H -0.178 1.178 44 H 0.168 0.832 45 H 0.102 0.898 46 H 0.124 0.876 Dipole moment (debyes) X Y Z Total from point charges 3.924 2.197 1.134 4.638 hybrid contribution -1.848 -0.220 0.663 1.975 sum 2.076 1.977 1.797 3.383 Atomic orbital electron populations 1.22523 0.93867 1.05024 1.02709 1.22114 0.94422 0.91564 0.81881 1.21881 1.02338 0.92356 1.03331 1.22520 1.01611 1.03448 0.96540 1.86307 1.71478 1.23480 1.46732 1.18181 0.78617 0.80558 0.82297 1.90917 1.41018 1.70519 1.43059 1.44740 1.55411 1.12109 1.23707 1.22732 0.99266 0.77730 0.96821 0.86481 1.24085 0.99246 0.97059 1.00136 1.21586 0.91456 0.86951 0.96798 0.86602 1.44231 1.14681 1.01110 1.73335 1.18373 0.88957 0.85411 0.91792 1.67292 1.15440 1.19406 1.20491 1.22353 0.98877 0.86568 0.93154 1.20886 0.94748 0.97637 1.07897 1.24836 1.06312 0.88416 0.97692 1.86613 1.66495 1.59063 1.21430 0.95118 0.77223 0.83495 0.85870 1.21292 0.96854 0.93756 0.94510 1.17997 0.81484 0.93155 1.11793 1.91502 1.37798 1.91341 1.90512 1.23819 1.03304 0.96015 0.96225 0.92129 0.90929 0.89461 0.91385 0.89930 0.91405 0.89438 0.90943 0.92111 0.75754 0.88384 0.90256 0.74882 0.81946 0.86165 0.77579 1.18064 1.17838 0.83228 0.89767 0.87642 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.26 8.37 37.16 0.31 0.05 16 2 C 0.14 0.19 1.13 -90.62 -0.10 0.09 16 3 C -0.14 0.10 8.85 37.16 0.33 0.42 16 4 C -0.18 -0.27 8.37 37.16 0.31 0.04 16 5 O -0.37 -0.87 9.94 -40.31 -0.40 -1.27 16 6 C 0.65 1.75 8.06 54.05 0.44 2.18 16 7 O -0.57 -2.89 11.48 -19.28 -0.22 -3.11 16 8 N -0.70 0.34 5.36 -57.79 -0.31 0.03 16 9 C 0.14 -0.17 4.13 -66.97 -0.28 -0.45 16 10 H 0.12 0.04 7.46 -51.93 -0.39 -0.35 16 11 C -0.16 0.23 7.70 -25.77 -0.20 0.04 16 12 C 0.14 -0.25 4.32 -67.12 -0.29 -0.54 16 13 H 0.12 -0.15 7.45 -51.93 -0.39 -0.54 16 14 N -0.70 0.39 5.42 -53.06 -0.29 0.10 16 15 C 0.39 0.42 7.49 -154.86 -1.16 -0.74 16 16 N -0.51 -0.49 9.15 -12.36 -0.11 -0.61 16 17 C 0.15 -0.08 9.84 -17.57 -0.17 -0.25 16 18 C -0.21 0.13 5.40 -104.47 -0.56 -0.44 16 19 C -0.06 0.08 2.84 36.01 0.10 0.19 16 20 O -0.53 -0.12 12.78 -35.23 -0.45 -0.57 16 21 Si 0.68 -1.45 29.82 -169.99 -5.07 -6.52 16 22 C -0.04 -0.02 9.75 -39.26 -0.38 -0.40 16 23 C -0.02 -0.02 7.35 -39.10 -0.29 -0.31 16 24 F -0.13 -0.29 16.65 2.25 0.04 -0.25 16 25 C -0.15 0.49 7.57 -25.92 -0.20 0.30 16 26 H 0.06 0.07 8.14 -51.92 -0.42 -0.36 16 27 H 0.07 0.01 8.14 -51.93 -0.42 -0.42 16 28 H 0.09 0.31 5.88 -51.93 -0.31 0.00 16 29 H 0.07 -0.05 8.14 -51.93 -0.42 -0.48 16 30 H 0.08 -0.16 8.14 -51.93 -0.42 -0.58 16 31 H 0.07 -0.05 8.14 -51.93 -0.42 -0.48 16 32 H 0.09 0.32 5.88 -51.93 -0.31 0.01 16 33 H 0.07 0.01 8.14 -51.93 -0.42 -0.41 16 34 H 0.06 0.07 8.14 -51.93 -0.42 -0.35 16 35 H 0.41 -1.08 8.84 -40.82 -0.36 -1.44 16 36 H 0.10 -0.21 8.14 -51.93 -0.42 -0.63 16 37 H 0.08 0.03 8.14 -51.93 -0.42 -0.39 16 38 H 0.41 -0.50 8.18 -40.82 -0.33 -0.83 16 39 H 0.16 -0.45 4.88 -52.48 -0.26 -0.71 16 40 H 0.12 -0.25 7.96 -51.93 -0.41 -0.66 16 41 H 0.38 -0.96 8.70 45.56 0.40 -0.56 16 42 H -0.26 0.09 7.11 56.52 0.40 0.50 16 43 H -0.25 -0.34 7.11 56.52 0.40 0.06 16 44 H 0.15 -0.05 8.06 -52.48 -0.42 -0.48 16 45 H 0.08 -0.26 8.14 -51.93 -0.42 -0.68 16 46 H 0.11 -0.48 8.12 -51.93 -0.42 -0.90 16 LS Contribution 378.79 15.07 5.71 5.71 Total: 0.00 -7.12 378.79 -9.87 -16.99 By element: Atomic # 1 Polarization: -4.07 SS G_CDS: -6.62 Total: -10.69 kcal Atomic # 6 Polarization: 2.32 SS G_CDS: -2.14 Total: 0.18 kcal Atomic # 7 Polarization: 0.24 SS G_CDS: -0.71 Total: -0.47 kcal Atomic # 8 Polarization: -3.87 SS G_CDS: -1.07 Total: -4.95 kcal Atomic # 9 Polarization: -0.29 SS G_CDS: 0.04 Total: -0.25 kcal Atomic # 14 Polarization: -1.45 SS G_CDS: -5.07 Total: -6.52 kcal Total LS contribution 5.71 Total: 5.71 kcal Total: -7.12 -9.87 -16.99 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_13941012_17656566.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -65.980 kcal (2) G-P(sol) polarization free energy of solvation -7.125 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -73.105 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.869 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.994 kcal (6) G-S(sol) free energy of system = (1) + (5) -82.974 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.00 seconds