Wall clock time and date at job start Mon Mar 8 2021 04:37:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53002 * 1 3 3 C 1.52997 * 109.47092 * 2 1 4 4 C 1.53002 * 109.47454 * 239.99992 * 2 1 3 5 5 O 1.45206 * 109.47129 * 119.99823 * 2 1 3 6 6 C 1.34636 * 117.00048 * 60.00363 * 5 2 1 7 7 O 1.21514 * 119.99573 * 359.97438 * 6 5 2 8 8 N 1.34774 * 120.00282 * 179.97438 * 6 5 2 9 9 C 1.46497 * 120.00206 * 179.97438 * 8 6 5 10 10 H 1.09002 * 112.84865 * 23.80487 * 9 8 6 11 11 C 1.53779 * 113.61241 * 155.00040 * 9 8 6 12 12 C 1.53782 * 87.07952 * 139.98216 * 11 9 8 13 13 H 1.08999 * 113.61337 * 89.11699 * 12 11 9 14 14 N 1.46497 * 113.61564 * 219.93411 * 12 11 9 15 15 C 1.38409 * 120.00296 * 205.00181 * 14 12 11 16 16 N 1.32490 * 119.21502 * 359.73061 * 15 14 12 17 17 C 1.32281 * 120.74264 * 179.71863 * 16 15 14 18 18 C 1.38600 * 119.19265 * 0.54707 * 17 16 15 19 19 C 1.50700 * 120.71980 * 179.70836 * 18 17 16 20 20 O 1.42906 * 109.47246 * 120.02042 * 19 18 17 21 21 Si 1.86300 * 109.47203 * 0.02562 * 19 18 17 22 22 C 1.38605 * 118.56056 * 359.72638 * 18 17 16 23 23 N 1.32270 * 119.19766 * 0.02562 * 22 18 17 24 24 C 1.53782 * 113.61440 * 252.50147 * 9 8 6 25 25 H 1.09004 * 109.47059 * 299.99666 * 1 2 3 26 26 H 1.08992 * 109.47060 * 60.00150 * 1 2 3 27 27 H 1.09004 * 109.46930 * 180.02562 * 1 2 3 28 28 H 1.09001 * 109.47375 * 179.97438 * 3 2 1 29 29 H 1.09002 * 109.47045 * 299.99867 * 3 2 1 30 30 H 1.09000 * 109.47140 * 59.99774 * 3 2 1 31 31 H 1.09004 * 109.47006 * 299.99897 * 4 2 1 32 32 H 1.09002 * 109.46838 * 59.99394 * 4 2 1 33 33 H 1.08992 * 109.47056 * 180.02562 * 4 2 1 34 34 H 0.97003 * 119.99726 * 0.02562 * 8 6 5 35 35 H 1.08999 * 113.61783 * 254.52636 * 11 9 8 36 36 H 1.08995 * 113.61541 * 25.35465 * 11 9 8 37 37 H 0.96995 * 119.99877 * 24.99874 * 14 12 11 38 38 H 1.08001 * 120.40626 * 180.29317 * 17 16 15 39 39 H 1.09007 * 109.47200 * 240.01790 * 19 18 17 40 40 H 0.96701 * 113.99523 * 300.00253 * 20 19 18 41 41 H 1.48501 * 109.99608 * 58.68413 * 21 19 18 42 42 H 1.48501 * 110.00039 * 179.97438 * 21 19 18 43 43 H 1.08001 * 120.40269 * 179.97438 * 22 18 17 44 44 H 1.08997 * 113.61709 * 334.56072 * 24 9 8 45 45 H 1.08994 * 113.61835 * 105.47378 * 24 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0401 -0.7212 -1.2492 5 8 2.0140 -0.6845 1.1856 6 6 1.6524 -1.9723 1.3384 7 8 0.9510 -2.5094 0.5040 8 7 2.0681 -2.6657 2.4167 9 6 1.6741 -4.0668 2.5832 10 1 1.4210 -4.5503 1.6396 11 6 2.6476 -4.8815 3.4512 12 6 1.4103 -5.5542 4.0688 13 1 1.0840 -6.4449 3.5321 14 7 1.5189 -5.7686 5.5139 15 6 0.7871 -6.7743 6.1213 16 7 -0.0108 -7.5303 5.3817 17 6 -0.7196 -8.5034 5.9298 18 6 -0.6283 -8.7194 7.2959 19 6 -1.4255 -9.8140 7.9572 20 8 -0.5353 -10.7380 8.5865 21 14 -2.4401 -10.7054 6.6739 22 6 0.2117 -7.9065 8.0406 23 7 0.8968 -6.9543 7.4294 24 6 0.6285 -4.2854 3.6894 25 1 -0.3633 0.5138 0.8900 26 1 -0.3633 0.5138 -0.8899 27 1 -0.3633 -1.0277 0.0005 28 1 3.1300 1.4425 0.0005 29 1 1.6767 1.9563 -0.8900 30 1 1.6766 1.9563 0.8900 31 1 1.6768 -1.7490 -1.2492 32 1 1.6767 -0.2074 -2.1392 33 1 3.1300 -0.7216 -1.2489 34 1 2.6277 -2.2368 3.0829 35 1 3.2760 -5.5643 2.8793 36 1 3.2149 -4.2753 4.1574 37 1 2.1036 -5.2059 6.0451 38 1 -1.3648 -9.1195 5.3210 39 1 -2.0874 -9.3796 8.7064 40 1 0.0842 -11.1637 7.9781 41 1 -1.5512 -11.2752 5.6297 42 1 -3.2305 -11.7879 7.3133 43 1 0.3052 -8.0483 9.1071 44 1 0.6428 -3.5165 4.4619 45 1 -0.3732 -4.4870 3.3099 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_13941096_12175864.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:37:34 Heat of formation + Delta-G solvation = -22.633843 kcal Electronic energy + Delta-G solvation = -26895.284566 eV Core-core repulsion = 22916.075496 eV Total energy + Delta-G solvation = -3979.209071 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 323.168 amu Computer time = 0.95 seconds Orbital eigenvalues (eV) -42.15448 -41.76610 -40.46117 -38.29004 -37.86173 -35.98448 -35.12654 -34.70533 -33.81522 -31.93145 -28.32133 -28.27888 -27.11214 -26.92873 -26.00691 -25.23996 -23.42495 -22.66616 -21.49435 -20.79627 -19.45968 -19.07742 -18.84399 -18.15907 -17.65451 -17.06683 -16.83205 -16.60983 -16.49884 -16.11244 -15.73667 -15.68601 -15.42945 -15.30594 -15.01787 -14.57274 -14.36709 -14.11403 -14.00511 -13.71290 -13.41984 -13.20855 -13.15578 -12.85491 -12.81898 -12.65082 -12.46818 -12.36657 -12.23481 -12.19196 -12.11415 -11.85506 -11.74640 -11.29042 -11.28031 -10.95237 -10.72625 -10.18657 -10.04263 -9.13341 -5.03729 0.04600 0.14962 1.16215 1.20881 1.51572 1.80487 1.87666 1.90866 2.78619 3.07011 3.16800 3.25256 3.29982 3.38747 3.60580 3.69032 3.72406 3.74308 3.76768 3.78931 3.84220 3.98032 4.18996 4.40873 4.46898 4.48231 4.52293 4.57017 4.63828 4.65934 4.68348 4.75859 4.78899 4.85658 4.90936 4.94016 4.95787 5.09177 5.20889 5.33860 5.37485 5.47889 5.60443 5.75391 5.97560 6.32468 6.36054 6.41723 7.27071 7.42689 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.184 4.184 2 C 0.137 3.863 3 C -0.142 4.142 4 C -0.184 4.184 5 O -0.365 6.365 6 C 0.651 3.349 7 O -0.565 6.565 8 N -0.701 5.701 9 C 0.145 3.855 10 H 0.126 0.874 11 C -0.155 4.155 12 C 0.144 3.856 13 H 0.127 0.873 14 N -0.683 5.683 15 C 0.568 3.432 16 N -0.561 5.561 17 C 0.200 3.800 18 C -0.292 4.292 19 C -0.053 4.053 20 O -0.530 6.530 21 Si 0.678 3.322 22 C 0.223 3.777 23 N -0.569 5.569 24 C -0.167 4.167 25 H 0.060 0.940 26 H 0.072 0.928 27 H 0.087 0.913 28 H 0.067 0.933 29 H 0.082 0.918 30 H 0.067 0.933 31 H 0.087 0.913 32 H 0.072 0.928 33 H 0.060 0.940 34 H 0.407 0.593 35 H 0.089 0.911 36 H 0.095 0.905 37 H 0.415 0.585 38 H 0.167 0.833 39 H 0.120 0.880 40 H 0.376 0.624 41 H -0.257 1.257 42 H -0.253 1.253 43 H 0.171 0.829 44 H 0.090 0.910 45 H 0.083 0.917 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.266 1.674 -0.328 1.726 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.241 4.241 2 C 0.100 3.900 3 C -0.199 4.199 4 C -0.241 4.241 5 O -0.280 6.280 6 C 0.404 3.596 7 O -0.454 6.454 8 N -0.359 5.359 9 C 0.040 3.960 10 H 0.143 0.857 11 C -0.194 4.194 12 C 0.037 3.963 13 H 0.144 0.856 14 N -0.318 5.318 15 C 0.211 3.789 16 N -0.283 5.283 17 C 0.032 3.968 18 C -0.300 4.300 19 C -0.164 4.164 20 O -0.336 6.336 21 Si 0.578 3.422 22 C 0.055 3.945 23 N -0.290 5.290 24 C -0.207 4.207 25 H 0.079 0.921 26 H 0.091 0.909 27 H 0.106 0.894 28 H 0.086 0.914 29 H 0.101 0.899 30 H 0.086 0.914 31 H 0.106 0.894 32 H 0.091 0.909 33 H 0.079 0.921 34 H 0.242 0.758 35 H 0.107 0.893 36 H 0.113 0.887 37 H 0.253 0.747 38 H 0.184 0.816 39 H 0.138 0.862 40 H 0.224 0.776 41 H -0.182 1.182 42 H -0.178 1.178 43 H 0.188 0.812 44 H 0.108 0.892 45 H 0.101 0.899 Dipole moment (debyes) X Y Z Total from point charges -0.051 1.693 -1.337 2.158 hybrid contribution 1.082 -0.609 1.148 1.691 sum 1.031 1.085 -0.189 1.509 Atomic orbital electron populations 1.22523 0.93822 1.05081 1.02705 1.22120 0.94461 0.91547 0.81851 1.21880 1.02323 0.92380 1.03340 1.22523 1.01593 1.03463 0.96545 1.86308 1.71486 1.23473 1.46756 1.18151 0.78678 0.80647 0.82089 1.90920 1.40795 1.70394 1.43254 1.44672 1.55509 1.11990 1.23715 1.22266 0.95427 0.79149 0.99166 0.85668 1.23838 0.97339 0.99170 0.99070 1.22265 0.96109 0.98356 0.79566 0.85551 1.44095 1.46701 1.33358 1.07679 1.19417 0.87094 0.87147 0.85220 1.67905 1.11587 1.08997 1.39813 1.22798 0.91547 0.90795 0.91664 1.21664 1.07130 1.04794 0.96413 1.24676 0.95721 0.90853 1.05175 1.86612 1.50403 1.58768 1.37817 0.95235 0.83688 0.84999 0.78238 1.22841 0.85977 0.85360 1.00328 1.67990 1.28040 1.23578 1.09438 1.24088 1.00084 0.98071 0.98486 0.92142 0.90926 0.89386 0.91404 0.89919 0.91411 0.89408 0.90921 0.92129 0.75828 0.89285 0.88705 0.74696 0.81619 0.86179 0.77640 1.18198 1.17755 0.81232 0.89151 0.89855 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.24 8.37 37.16 0.31 0.08 16 2 C 0.14 0.17 1.13 -90.62 -0.10 0.06 16 3 C -0.14 0.11 8.85 37.16 0.33 0.44 16 4 C -0.18 -0.22 8.37 37.16 0.31 0.09 16 5 O -0.37 -0.82 9.94 -40.31 -0.40 -1.22 16 6 C 0.65 1.60 8.06 54.05 0.44 2.03 16 7 O -0.56 -2.68 11.48 -19.28 -0.22 -2.90 16 8 N -0.70 0.46 5.36 -57.93 -0.31 0.15 16 9 C 0.14 -0.22 4.24 -67.12 -0.28 -0.51 16 10 H 0.13 -0.04 7.46 -51.93 -0.39 -0.43 16 11 C -0.16 0.51 7.58 -25.92 -0.20 0.31 16 12 C 0.14 -0.25 4.24 -67.12 -0.28 -0.54 16 13 H 0.13 -0.11 7.37 -51.93 -0.38 -0.50 16 14 N -0.68 0.38 5.51 -55.00 -0.30 0.08 16 15 C 0.57 1.04 8.43 -322.80 -2.72 -1.68 16 16 N -0.56 -0.92 9.13 -13.93 -0.13 -1.05 16 17 C 0.20 -0.02 9.92 -17.22 -0.17 -0.19 16 18 C -0.29 0.14 5.40 -104.35 -0.56 -0.43 16 19 C -0.05 0.08 2.85 36.01 0.10 0.18 16 20 O -0.53 0.01 12.79 -35.23 -0.45 -0.44 16 21 Si 0.68 -1.36 29.87 -169.99 -5.08 -6.44 16 22 C 0.22 0.14 10.92 -17.23 -0.19 -0.05 16 23 N -0.57 -1.26 10.46 -13.93 -0.15 -1.40 16 24 C -0.17 0.25 7.68 -25.92 -0.20 0.05 16 25 H 0.06 0.06 8.14 -51.93 -0.42 -0.36 16 26 H 0.07 0.00 8.14 -51.93 -0.42 -0.43 16 27 H 0.09 0.29 5.88 -51.93 -0.31 -0.01 16 28 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 29 H 0.08 -0.17 8.14 -51.93 -0.42 -0.59 16 30 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 31 H 0.09 0.28 5.88 -51.93 -0.31 -0.02 16 32 H 0.07 -0.01 8.14 -51.93 -0.42 -0.43 16 33 H 0.06 0.06 8.14 -51.93 -0.42 -0.37 16 34 H 0.41 -1.08 8.84 -40.82 -0.36 -1.44 16 35 H 0.09 -0.30 8.14 -51.93 -0.42 -0.72 16 36 H 0.09 -0.41 8.10 -51.93 -0.42 -0.84 16 37 H 0.42 -0.72 8.84 -40.82 -0.36 -1.08 16 38 H 0.17 -0.41 5.04 -52.49 -0.26 -0.67 16 39 H 0.12 -0.28 7.96 -51.93 -0.41 -0.70 16 40 H 0.38 -0.97 8.70 45.56 0.40 -0.57 16 41 H -0.26 0.02 7.11 56.52 0.40 0.43 16 42 H -0.25 -0.37 7.11 56.52 0.40 0.04 16 43 H 0.17 -0.18 8.06 -52.49 -0.42 -0.60 16 44 H 0.09 -0.13 8.14 -51.93 -0.42 -0.55 16 45 H 0.08 -0.03 8.14 -51.93 -0.42 -0.45 16 LS Contribution 368.34 15.07 5.55 5.55 Total: 0.00 -7.73 368.34 -11.36 -19.09 By element: Atomic # 1 Polarization: -4.61 SS G_CDS: -6.65 Total: -11.26 kcal Atomic # 6 Polarization: 3.07 SS G_CDS: -3.22 Total: -0.15 kcal Atomic # 7 Polarization: -1.34 SS G_CDS: -0.89 Total: -2.23 kcal Atomic # 8 Polarization: -3.49 SS G_CDS: -1.07 Total: -4.57 kcal Atomic # 14 Polarization: -1.36 SS G_CDS: -5.08 Total: -6.44 kcal Total LS contribution 5.55 Total: 5.55 kcal Total: -7.73 -11.36 -19.09 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_13941096_12175864.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -3.541 kcal (2) G-P(sol) polarization free energy of solvation -7.734 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -11.275 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.359 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.093 kcal (6) G-S(sol) free energy of system = (1) + (5) -22.634 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.95 seconds