Wall clock time and date at job start Mon Mar 8 2021 04:37:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52998 * 1 3 3 C 1.53003 * 109.46833 * 2 1 4 4 C 1.52994 * 109.47358 * 239.99810 * 2 1 3 5 5 O 1.45201 * 109.47140 * 119.99850 * 2 1 3 6 6 C 1.34631 * 117.00379 * 60.00203 * 5 2 1 7 7 O 1.21510 * 119.99660 * 359.97438 * 6 5 2 8 8 N 1.34772 * 120.00310 * 180.02562 * 6 5 2 9 9 C 1.46502 * 120.00055 * 180.02562 * 8 6 5 10 10 H 1.09007 * 112.84829 * 23.80087 * 9 8 6 11 11 C 1.53780 * 113.61768 * 155.00113 * 9 8 6 12 12 C 1.53774 * 87.08274 * 89.20074 * 11 9 8 13 13 H 1.08993 * 113.61712 * 140.07001 * 12 11 9 14 14 N 1.46503 * 113.61391 * 270.88617 * 12 11 9 15 15 C 1.39140 * 120.00296 * 203.47536 * 14 12 11 16 16 N 1.32341 * 119.71841 * 0.26142 * 15 14 12 17 17 C 1.32007 * 121.64583 * 180.31643 * 16 15 14 18 18 C 1.37982 * 120.90223 * 359.68082 * 17 16 15 19 19 C 1.50697 * 120.32645 * 180.02562 * 18 17 16 20 20 O 1.42900 * 109.47490 * 120.02322 * 19 18 17 21 21 Si 1.86301 * 109.47303 * 0.02562 * 19 18 17 22 22 C 1.38904 * 119.34805 * 0.02562 * 18 17 16 23 23 C 1.38439 * 118.48364 * 0.02562 * 22 18 17 24 24 F 1.35104 * 120.47218 * 179.97438 * 23 22 18 25 25 C 1.53779 * 87.17322 * 25.47565 * 12 11 9 26 26 H 1.09004 * 109.47089 * 300.00058 * 1 2 3 27 27 H 1.08999 * 109.47549 * 60.00419 * 1 2 3 28 28 H 1.09009 * 109.46912 * 180.02562 * 1 2 3 29 29 H 1.09005 * 109.46712 * 179.97438 * 3 2 1 30 30 H 1.08997 * 109.47103 * 299.99429 * 3 2 1 31 31 H 1.08995 * 109.47164 * 59.99945 * 3 2 1 32 32 H 1.09001 * 109.47415 * 299.99890 * 4 2 1 33 33 H 1.09005 * 109.47046 * 59.99868 * 4 2 1 34 34 H 1.09001 * 109.47676 * 179.97438 * 4 2 1 35 35 H 0.96993 * 120.00118 * 359.97438 * 8 6 5 36 36 H 1.09004 * 113.61156 * 334.64788 * 11 9 8 37 37 H 1.09001 * 113.69339 * 203.76118 * 11 9 8 38 38 H 0.97007 * 120.00201 * 23.47055 * 14 12 11 39 39 H 1.08006 * 119.54766 * 179.70940 * 17 16 15 40 40 H 1.09003 * 109.47205 * 240.02371 * 19 18 17 41 41 H 0.96702 * 113.99687 * 300.00074 * 20 19 18 42 42 H 1.48506 * 109.99774 * 58.68113 * 21 19 18 43 43 H 1.48498 * 110.00461 * 180.02562 * 21 19 18 44 44 H 1.07997 * 120.75505 * 179.97438 * 22 18 17 45 45 H 1.08992 * 113.61334 * 89.07835 * 25 12 11 46 46 H 1.09004 * 113.61281 * 219.97552 * 25 12 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0399 1.4426 0.0000 4 6 2.0400 -0.7213 -1.2491 5 8 2.0140 -0.6845 1.1856 6 6 1.6523 -1.9722 1.3384 7 8 0.9510 -2.5094 0.5041 8 7 2.0673 -2.6653 2.4173 9 6 1.6742 -4.0668 2.5832 10 1 1.4226 -4.5504 1.6393 11 6 2.6471 -4.8808 3.4525 12 6 1.8041 -4.4476 4.6634 13 1 1.6588 -5.2381 5.3995 14 7 2.2440 -3.1855 5.2634 15 6 1.9414 -2.9040 6.5920 16 7 1.2605 -3.7827 7.3101 17 6 0.9475 -3.5522 8.5717 18 6 1.3277 -2.3806 9.1935 19 6 0.9639 -2.1311 10.6344 20 8 2.1558 -1.9575 11.4035 21 14 0.0059 -3.5865 11.2940 22 6 2.0491 -1.4333 8.4781 23 6 2.3622 -1.7015 7.1566 24 9 3.0618 -0.8082 6.4233 25 6 0.6249 -4.2885 3.6892 26 1 -0.3633 0.5139 0.8900 27 1 -0.3634 0.5137 -0.8900 28 1 -0.3633 -1.0278 0.0005 29 1 3.1300 1.4425 0.0005 30 1 1.6766 1.9563 -0.8900 31 1 1.6766 1.9563 0.8899 32 1 1.6767 -1.7489 -1.2492 33 1 1.6767 -0.2074 -2.1392 34 1 3.1300 -0.7209 -1.2494 35 1 2.6268 -2.2364 3.0834 36 1 3.6618 -4.4826 3.4619 37 1 2.6150 -5.9530 3.2592 38 1 2.7462 -2.5460 4.7344 39 1 0.3866 -4.2910 9.1248 40 1 0.3522 -1.2317 10.7043 41 1 2.7491 -2.7209 11.3870 42 1 0.8173 -4.8246 11.1750 43 1 -0.3594 -3.3526 12.7142 44 1 2.3580 -0.5083 8.9422 45 1 0.0397 -5.1988 3.5597 46 1 0.0080 -3.4125 3.8897 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_13941096_17656566.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:37:50 Heat of formation + Delta-G solvation = -75.283749 kcal Electronic energy + Delta-G solvation = -30347.138015 eV Core-core repulsion = 25961.617809 eV Total energy + Delta-G solvation = -4385.520207 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 340.163 amu Computer time = 1.03 seconds Orbital eigenvalues (eV) -49.92714 -42.04090 -41.47352 -40.53983 -38.21975 -37.79710 -35.68272 -35.16513 -33.79011 -33.22240 -31.22934 -28.33037 -28.29172 -27.02239 -26.86399 -25.98624 -24.74988 -23.37327 -22.77793 -21.34732 -20.72452 -19.57982 -19.15365 -18.52302 -18.27539 -17.61161 -17.56764 -17.10766 -17.03448 -16.72922 -16.42748 -16.15369 -15.84582 -15.79554 -15.49823 -15.40584 -15.25248 -14.86684 -14.41239 -14.35630 -14.03412 -13.95290 -13.79050 -13.45377 -13.41987 -13.12640 -13.02877 -12.85869 -12.83207 -12.70624 -12.47634 -12.24827 -12.15661 -12.06792 -11.66222 -11.30852 -11.23665 -10.99034 -10.84844 -10.66452 -10.58715 -10.24081 -8.86893 -5.03743 -0.12579 0.06206 1.07085 1.18617 1.51677 1.79272 1.84765 1.90054 2.48809 2.93967 3.07389 3.14892 3.27254 3.31052 3.41289 3.50629 3.75120 3.77071 3.78468 3.83144 3.92134 3.96702 3.97525 4.37832 4.40784 4.47227 4.49309 4.55545 4.56537 4.62901 4.64268 4.70454 4.73900 4.78044 4.82481 4.90175 4.92333 4.92767 4.93309 5.08537 5.22790 5.36067 5.36739 5.46673 5.56676 5.86315 6.03660 6.31658 6.31723 6.85984 7.37546 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.184 4.184 2 C 0.137 3.863 3 C -0.142 4.142 4 C -0.184 4.184 5 O -0.365 6.365 6 C 0.654 3.346 7 O -0.561 6.561 8 N -0.696 5.696 9 C 0.132 3.868 10 H 0.113 0.887 11 C -0.155 4.155 12 C 0.131 3.869 13 H 0.114 0.886 14 N -0.701 5.701 15 C 0.392 3.608 16 N -0.507 5.507 17 C 0.148 3.852 18 C -0.206 4.206 19 C -0.062 4.062 20 O -0.530 6.530 21 Si 0.682 3.318 22 C -0.037 4.037 23 C -0.019 4.019 24 F -0.133 7.133 25 C -0.165 4.165 26 H 0.060 0.940 27 H 0.072 0.928 28 H 0.087 0.913 29 H 0.067 0.933 30 H 0.083 0.917 31 H 0.067 0.933 32 H 0.087 0.913 33 H 0.072 0.928 34 H 0.060 0.940 35 H 0.397 0.603 36 H 0.081 0.919 37 H 0.118 0.882 38 H 0.405 0.595 39 H 0.165 0.835 40 H 0.121 0.879 41 H 0.377 0.623 42 H -0.256 1.256 43 H -0.254 1.254 44 H 0.150 0.850 45 H 0.107 0.893 46 H 0.077 0.923 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.581 -1.184 0.228 1.338 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.241 4.241 2 C 0.101 3.899 3 C -0.199 4.199 4 C -0.241 4.241 5 O -0.279 6.279 6 C 0.408 3.592 7 O -0.449 6.449 8 N -0.356 5.356 9 C 0.028 3.972 10 H 0.131 0.869 11 C -0.194 4.194 12 C 0.025 3.975 13 H 0.132 0.868 14 N -0.336 5.336 15 C 0.155 3.845 16 N -0.224 5.224 17 C -0.009 4.009 18 C -0.211 4.211 19 C -0.173 4.173 20 O -0.336 6.336 21 Si 0.583 3.417 22 C -0.064 4.064 23 C -0.046 4.046 24 F -0.112 7.112 25 C -0.205 4.205 26 H 0.079 0.921 27 H 0.091 0.909 28 H 0.106 0.894 29 H 0.086 0.914 30 H 0.101 0.899 31 H 0.086 0.914 32 H 0.106 0.894 33 H 0.091 0.909 34 H 0.079 0.921 35 H 0.233 0.767 36 H 0.099 0.901 37 H 0.136 0.864 38 H 0.243 0.757 39 H 0.181 0.819 40 H 0.138 0.862 41 H 0.224 0.776 42 H -0.180 1.180 43 H -0.178 1.178 44 H 0.168 0.832 45 H 0.126 0.874 46 H 0.096 0.904 Dipole moment (debyes) X Y Z Total from point charges -1.520 -2.347 -0.045 2.796 hybrid contribution 2.047 1.505 0.415 2.574 sum 0.527 -0.842 0.369 1.060 Atomic orbital electron populations 1.22526 0.93799 1.05071 1.02753 1.22135 0.94481 0.91563 0.81766 1.21885 1.02358 0.92320 1.03381 1.22525 1.01622 1.03445 0.96541 1.86308 1.71481 1.23303 1.46854 1.18042 0.78619 0.80679 0.81900 1.90923 1.40567 1.70347 1.43091 1.44495 1.55526 1.12013 1.23559 1.22012 0.95812 0.79236 1.00146 0.86908 1.23797 0.99016 1.02030 0.94517 1.21952 0.94529 0.86290 0.94747 0.86803 1.44332 1.60279 1.21241 1.07700 1.18367 0.91396 0.88224 0.86562 1.67296 1.16499 1.30736 1.07836 1.22364 0.94436 0.94678 0.89440 1.20896 1.05187 0.96418 0.98574 1.24839 0.92153 1.12378 0.87898 1.86615 1.32096 1.43664 1.71203 0.95116 0.87339 0.75589 0.83669 1.21289 0.94232 1.00002 0.90830 1.18011 1.04824 0.89926 0.91814 1.91500 1.76795 1.66400 1.76525 1.24043 0.97314 1.03818 0.95309 0.92124 0.90862 0.89410 0.91370 0.89868 0.91376 0.89417 0.90869 0.92098 0.76661 0.90054 0.86381 0.75689 0.81891 0.86163 0.77567 1.18030 1.17818 0.83204 0.87433 0.90389 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.28 8.37 37.16 0.31 0.03 16 2 C 0.14 0.21 1.13 -90.62 -0.10 0.10 16 3 C -0.14 0.06 8.85 37.16 0.33 0.39 16 4 C -0.18 -0.25 8.37 37.15 0.31 0.06 16 5 O -0.36 -0.97 9.94 -40.30 -0.40 -1.37 16 6 C 0.65 1.91 8.06 54.05 0.44 2.35 16 7 O -0.56 -2.82 11.48 -19.28 -0.22 -3.04 16 8 N -0.70 -0.08 5.14 -57.79 -0.30 -0.38 16 9 C 0.13 -0.14 4.33 -66.98 -0.29 -0.43 16 10 H 0.11 -0.01 7.46 -51.93 -0.39 -0.39 16 11 C -0.15 0.47 7.58 -25.92 -0.20 0.27 16 12 C 0.13 -0.23 4.33 -67.12 -0.29 -0.52 16 13 H 0.11 -0.15 7.44 -51.93 -0.39 -0.53 16 14 N -0.70 0.50 5.27 -53.06 -0.28 0.22 16 15 C 0.39 0.35 7.49 -154.86 -1.16 -0.81 16 16 N -0.51 -0.42 9.15 -12.36 -0.11 -0.53 16 17 C 0.15 -0.10 9.84 -17.57 -0.17 -0.27 16 18 C -0.21 0.16 5.40 -104.47 -0.56 -0.40 16 19 C -0.06 0.09 2.84 36.00 0.10 0.20 16 20 O -0.53 -0.03 12.78 -35.23 -0.45 -0.48 16 21 Si 0.68 -1.53 29.82 -169.99 -5.07 -6.60 16 22 C -0.04 -0.01 9.75 -39.26 -0.38 -0.39 16 23 C -0.02 -0.02 7.35 -39.09 -0.29 -0.31 16 24 F -0.13 -0.23 16.65 2.25 0.04 -0.19 16 25 C -0.16 0.23 7.70 -25.78 -0.20 0.03 16 26 H 0.06 0.09 8.14 -51.93 -0.42 -0.34 16 27 H 0.07 0.01 8.14 -51.93 -0.42 -0.41 16 28 H 0.09 0.32 5.88 -51.92 -0.31 0.01 16 29 H 0.07 -0.04 8.14 -51.93 -0.42 -0.46 16 30 H 0.08 -0.15 8.14 -51.93 -0.42 -0.57 16 31 H 0.07 -0.03 8.14 -51.93 -0.42 -0.45 16 32 H 0.09 0.30 5.88 -51.93 -0.31 -0.01 16 33 H 0.07 0.00 8.14 -51.93 -0.42 -0.42 16 34 H 0.06 0.07 8.14 -51.93 -0.42 -0.36 16 35 H 0.40 -0.48 6.27 -40.82 -0.26 -0.74 16 36 H 0.08 -0.24 8.14 -51.93 -0.42 -0.66 16 37 H 0.12 -0.53 8.14 -51.93 -0.42 -0.95 16 38 H 0.40 -0.56 5.64 -40.82 -0.23 -0.79 16 39 H 0.16 -0.47 4.88 -52.48 -0.26 -0.73 16 40 H 0.12 -0.27 7.96 -51.93 -0.41 -0.68 16 41 H 0.38 -1.01 8.70 45.56 0.40 -0.62 16 42 H -0.26 0.12 7.11 56.52 0.40 0.52 16 43 H -0.25 -0.32 7.11 56.52 0.40 0.08 16 44 H 0.15 -0.09 8.06 -52.49 -0.42 -0.51 16 45 H 0.11 -0.28 8.14 -51.93 -0.42 -0.70 16 46 H 0.08 0.05 8.14 -51.93 -0.42 -0.37 16 LS Contribution 373.54 15.07 5.63 5.63 Total: 0.00 -6.81 373.54 -9.73 -16.55 By element: Atomic # 1 Polarization: -3.67 SS G_CDS: -6.41 Total: -10.09 kcal Atomic # 6 Polarization: 2.44 SS G_CDS: -2.16 Total: 0.29 kcal Atomic # 7 Polarization: 0.00 SS G_CDS: -0.69 Total: -0.69 kcal Atomic # 8 Polarization: -3.83 SS G_CDS: -1.07 Total: -4.90 kcal Atomic # 9 Polarization: -0.23 SS G_CDS: 0.04 Total: -0.19 kcal Atomic # 14 Polarization: -1.53 SS G_CDS: -5.07 Total: -6.60 kcal Total LS contribution 5.63 Total: 5.63 kcal Total: -6.81 -9.73 -16.55 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_13941096_17656566.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -58.735 kcal (2) G-P(sol) polarization free energy of solvation -6.815 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -65.550 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.734 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.548 kcal (6) G-S(sol) free energy of system = (1) + (5) -75.284 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.03 seconds