Wall clock time and date at job start Mon Mar 8 2021 04:37:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52998 * 1 3 3 C 1.53003 * 109.46833 * 2 1 4 4 C 1.52994 * 109.47358 * 239.99810 * 2 1 3 5 5 O 1.45201 * 109.47140 * 119.99850 * 2 1 3 6 6 C 1.34631 * 117.00379 * 60.00203 * 5 2 1 7 7 O 1.21510 * 119.99660 * 359.97438 * 6 5 2 8 8 N 1.34772 * 120.00310 * 180.02562 * 6 5 2 9 9 C 1.46502 * 120.00055 * 180.02562 * 8 6 5 10 10 H 1.09007 * 112.84829 * 23.80087 * 9 8 6 11 11 C 1.53780 * 113.61768 * 155.00113 * 9 8 6 12 12 C 1.53774 * 87.08274 * 89.20074 * 11 9 8 13 13 H 1.08993 * 113.61712 * 140.07001 * 12 11 9 14 14 N 1.46503 * 113.61391 * 270.88617 * 12 11 9 15 15 C 1.39140 * 120.00296 * 203.47536 * 14 12 11 16 16 N 1.32341 * 119.71841 * 0.26142 * 15 14 12 17 17 C 1.32007 * 121.64583 * 180.31643 * 16 15 14 18 18 C 1.37982 * 120.90223 * 359.68082 * 17 16 15 19 19 C 1.50697 * 120.32645 * 180.02562 * 18 17 16 20 20 O 1.42900 * 109.47490 * 120.02322 * 19 18 17 21 21 Si 1.86301 * 109.47303 * 0.02562 * 19 18 17 22 22 C 1.38904 * 119.34805 * 0.02562 * 18 17 16 23 23 C 1.38439 * 118.48364 * 0.02562 * 22 18 17 24 24 F 1.35104 * 120.47218 * 179.97438 * 23 22 18 25 25 C 1.53779 * 87.17322 * 25.47565 * 12 11 9 26 26 H 1.09004 * 109.47089 * 300.00058 * 1 2 3 27 27 H 1.08999 * 109.47549 * 60.00419 * 1 2 3 28 28 H 1.09009 * 109.46912 * 180.02562 * 1 2 3 29 29 H 1.09005 * 109.46712 * 179.97438 * 3 2 1 30 30 H 1.08997 * 109.47103 * 299.99429 * 3 2 1 31 31 H 1.08995 * 109.47164 * 59.99945 * 3 2 1 32 32 H 1.09001 * 109.47415 * 299.99890 * 4 2 1 33 33 H 1.09005 * 109.47046 * 59.99868 * 4 2 1 34 34 H 1.09001 * 109.47676 * 179.97438 * 4 2 1 35 35 H 0.96993 * 120.00118 * 359.97438 * 8 6 5 36 36 H 1.09004 * 113.61156 * 334.64788 * 11 9 8 37 37 H 1.09001 * 113.69339 * 203.76118 * 11 9 8 38 38 H 0.97007 * 120.00201 * 23.47055 * 14 12 11 39 39 H 1.08006 * 119.54766 * 179.70940 * 17 16 15 40 40 H 1.09003 * 109.47205 * 240.02371 * 19 18 17 41 41 H 0.96702 * 113.99687 * 300.00074 * 20 19 18 42 42 H 1.48506 * 109.99774 * 58.68113 * 21 19 18 43 43 H 1.48498 * 110.00461 * 180.02562 * 21 19 18 44 44 H 1.07997 * 120.75505 * 179.97438 * 22 18 17 45 45 H 1.08992 * 113.61334 * 89.07835 * 25 12 11 46 46 H 1.09004 * 113.61281 * 219.97552 * 25 12 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0399 1.4426 0.0000 4 6 2.0400 -0.7213 -1.2491 5 8 2.0140 -0.6845 1.1856 6 6 1.6523 -1.9722 1.3384 7 8 0.9510 -2.5094 0.5041 8 7 2.0673 -2.6653 2.4173 9 6 1.6742 -4.0668 2.5832 10 1 1.4226 -4.5504 1.6393 11 6 2.6471 -4.8808 3.4525 12 6 1.8041 -4.4476 4.6634 13 1 1.6588 -5.2381 5.3995 14 7 2.2440 -3.1855 5.2634 15 6 1.9414 -2.9040 6.5920 16 7 1.2605 -3.7827 7.3101 17 6 0.9475 -3.5522 8.5717 18 6 1.3277 -2.3806 9.1935 19 6 0.9639 -2.1311 10.6344 20 8 2.1558 -1.9575 11.4035 21 14 0.0059 -3.5865 11.2940 22 6 2.0491 -1.4333 8.4781 23 6 2.3622 -1.7015 7.1566 24 9 3.0618 -0.8082 6.4233 25 6 0.6249 -4.2885 3.6892 26 1 -0.3633 0.5139 0.8900 27 1 -0.3634 0.5137 -0.8900 28 1 -0.3633 -1.0278 0.0005 29 1 3.1300 1.4425 0.0005 30 1 1.6766 1.9563 -0.8900 31 1 1.6766 1.9563 0.8899 32 1 1.6767 -1.7489 -1.2492 33 1 1.6767 -0.2074 -2.1392 34 1 3.1300 -0.7209 -1.2494 35 1 2.6268 -2.2364 3.0834 36 1 3.6618 -4.4826 3.4619 37 1 2.6150 -5.9530 3.2592 38 1 2.7462 -2.5460 4.7344 39 1 0.3866 -4.2910 9.1248 40 1 0.3522 -1.2317 10.7043 41 1 2.7491 -2.7209 11.3870 42 1 0.8173 -4.8246 11.1750 43 1 -0.3594 -3.3526 12.7142 44 1 2.3580 -0.5083 8.9422 45 1 0.0397 -5.1988 3.5597 46 1 0.0080 -3.4125 3.8897 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_27_13941096_17656566.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:37:49 Heat of formation + Delta-G solvation = -73.339905 kcal Electronic energy + Delta-G solvation = -30347.053724 eV Core-core repulsion = 25961.617809 eV Total energy + Delta-G solvation = -4385.435915 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 340.163 amu Computer time = 1.06 seconds Orbital eigenvalues (eV) -49.99272 -42.11835 -41.49152 -40.51302 -38.23378 -37.87624 -35.71883 -35.24937 -33.83552 -33.20883 -31.19264 -28.41257 -28.35089 -26.94097 -26.75219 -25.94418 -24.76866 -23.39067 -22.77936 -21.43422 -20.70498 -19.60564 -19.20977 -18.50945 -18.27282 -17.68512 -17.57717 -17.27088 -17.06401 -16.70911 -16.37392 -16.10271 -15.85275 -15.74330 -15.51497 -15.47892 -15.33672 -14.85543 -14.50548 -14.32323 -14.04350 -13.90715 -13.64853 -13.42726 -13.40100 -13.15865 -12.99324 -12.92270 -12.92063 -12.64860 -12.58096 -12.35144 -12.11417 -12.06534 -11.58518 -11.44990 -11.18826 -11.16943 -10.80823 -10.65184 -10.54748 -10.28237 -8.83140 -4.88352 -0.11138 0.07432 1.01215 1.31817 1.63564 1.64110 1.86365 2.00450 2.50674 2.93655 3.06260 3.21944 3.37968 3.43045 3.52624 3.58567 3.69013 3.74566 3.83743 3.86747 3.89447 3.96470 4.08422 4.39757 4.44172 4.51721 4.57059 4.57693 4.61645 4.71877 4.73691 4.75924 4.77892 4.80466 4.82905 4.83872 4.95583 4.96930 4.99202 5.07950 5.22394 5.22860 5.30451 5.42880 5.52912 5.93689 6.08088 6.22347 6.50242 6.88732 7.22103 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.180 4.180 2 C 0.127 3.873 3 C -0.139 4.139 4 C -0.180 4.180 5 O -0.371 6.371 6 C 0.647 3.353 7 O -0.586 6.586 8 N -0.686 5.686 9 C 0.124 3.876 10 H 0.102 0.898 11 C -0.137 4.137 12 C 0.131 3.869 13 H 0.114 0.886 14 N -0.700 5.700 15 C 0.384 3.616 16 N -0.519 5.519 17 C 0.148 3.852 18 C -0.201 4.201 19 C -0.069 4.069 20 O -0.549 6.549 21 Si 0.765 3.235 22 C -0.040 4.040 23 C -0.038 4.038 24 F -0.141 7.141 25 C -0.160 4.160 26 H 0.059 0.941 27 H 0.088 0.912 28 H 0.064 0.936 29 H 0.070 0.930 30 H 0.100 0.900 31 H 0.067 0.933 32 H 0.065 0.935 33 H 0.088 0.912 34 H 0.062 0.938 35 H 0.404 0.596 36 H 0.085 0.915 37 H 0.139 0.861 38 H 0.406 0.594 39 H 0.185 0.815 40 H 0.128 0.872 41 H 0.387 0.613 42 H -0.274 1.274 43 H -0.302 1.302 44 H 0.154 0.846 45 H 0.122 0.878 46 H 0.056 0.944 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.447 -1.457 0.315 1.556 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.237 4.237 2 C 0.091 3.909 3 C -0.196 4.196 4 C -0.237 4.237 5 O -0.286 6.286 6 C 0.401 3.599 7 O -0.477 6.477 8 N -0.347 5.347 9 C 0.020 3.980 10 H 0.120 0.880 11 C -0.176 4.176 12 C 0.026 3.974 13 H 0.132 0.868 14 N -0.334 5.334 15 C 0.146 3.854 16 N -0.236 5.236 17 C -0.009 4.009 18 C -0.206 4.206 19 C -0.178 4.178 20 O -0.357 6.357 21 Si 0.670 3.330 22 C -0.067 4.067 23 C -0.064 4.064 24 F -0.120 7.120 25 C -0.200 4.200 26 H 0.078 0.922 27 H 0.107 0.893 28 H 0.083 0.917 29 H 0.089 0.911 30 H 0.119 0.881 31 H 0.086 0.914 32 H 0.084 0.916 33 H 0.107 0.893 34 H 0.081 0.919 35 H 0.241 0.759 36 H 0.103 0.897 37 H 0.157 0.843 38 H 0.245 0.755 39 H 0.202 0.798 40 H 0.146 0.854 41 H 0.236 0.764 42 H -0.201 1.201 43 H -0.230 1.230 44 H 0.172 0.828 45 H 0.140 0.860 46 H 0.075 0.925 Dipole moment (debyes) X Y Z Total from point charges -1.364 -2.616 0.026 2.950 hybrid contribution 1.986 1.592 0.445 2.584 sum 0.622 -1.023 0.471 1.287 Atomic orbital electron populations 1.22478 0.94026 1.03739 1.03495 1.22376 0.94474 0.92567 0.81471 1.21903 1.02494 0.90912 1.04246 1.22473 1.01672 1.02291 0.97245 1.86315 1.71573 1.23237 1.47472 1.18287 0.78570 0.80805 0.82269 1.90908 1.41792 1.70827 1.44154 1.44547 1.54939 1.12364 1.22830 1.22153 0.97067 0.78741 1.00006 0.87965 1.23775 0.98452 1.02815 0.92514 1.21991 0.94645 0.85855 0.94920 0.86776 1.44401 1.60024 1.21614 1.07323 1.18511 0.91495 0.88262 0.87127 1.67348 1.16874 1.30888 1.08451 1.22730 0.94008 0.95027 0.89161 1.20932 1.04811 0.96144 0.98738 1.25051 0.91921 1.13494 0.87320 1.86588 1.32851 1.44782 1.71446 0.94164 0.85274 0.73399 0.80183 1.21432 0.94186 1.00417 0.90632 1.18167 1.05749 0.90236 0.92289 1.91471 1.77089 1.66686 1.76771 1.24040 0.97185 1.03513 0.95231 0.92183 0.89280 0.91698 0.91145 0.88143 0.91363 0.91650 0.89338 0.91890 0.75901 0.89674 0.84280 0.75530 0.79848 0.85398 0.76377 1.20057 1.23010 0.82823 0.86033 0.92519 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.70 8.37 71.98 0.60 -0.10 16 2 C 0.13 0.45 1.13 -10.80 -0.01 0.44 16 3 C -0.14 0.18 8.85 71.98 0.64 0.82 16 4 C -0.18 -0.60 8.37 71.98 0.60 0.00 16 5 O -0.37 -2.38 9.94 -55.40 -0.55 -2.93 16 6 C 0.65 4.72 8.06 129.79 1.05 5.76 16 7 O -0.59 -7.02 11.48 19.81 0.23 -6.79 16 8 N -0.69 -0.85 5.14 -567.18 -2.92 -3.77 16 9 C 0.12 -0.21 4.33 45.61 0.20 -0.01 16 10 H 0.10 0.09 7.46 -2.38 -0.02 0.07 16 11 C -0.14 0.92 7.58 31.12 0.24 1.16 16 12 C 0.13 -0.49 4.33 45.51 0.20 -0.29 16 13 H 0.11 -0.37 7.44 -2.39 -0.02 -0.38 16 14 N -0.70 0.75 5.27 -321.80 -1.70 -0.95 16 15 C 0.38 0.82 7.49 133.09 1.00 1.82 16 16 N -0.52 -0.75 9.15 -193.03 -1.77 -2.52 16 17 C 0.15 -0.29 9.84 84.61 0.83 0.55 16 18 C -0.20 0.38 5.40 -19.77 -0.11 0.27 16 19 C -0.07 0.24 2.84 71.24 0.20 0.44 16 20 O -0.55 0.02 12.78 -148.98 -1.90 -1.88 16 21 Si 0.77 -3.79 29.82 68.60 2.05 -1.74 16 22 C -0.04 -0.03 9.75 22.48 0.22 0.19 16 23 C -0.04 -0.11 7.35 22.58 0.17 0.06 16 24 F -0.14 -0.63 16.65 44.97 0.75 0.12 16 25 C -0.16 0.38 7.70 31.21 0.24 0.62 16 26 H 0.06 0.22 8.14 -2.38 -0.02 0.20 16 27 H 0.09 0.02 8.14 -2.39 -0.02 0.00 16 28 H 0.06 0.58 5.88 -2.38 -0.01 0.57 16 29 H 0.07 -0.11 8.14 -2.38 -0.02 -0.13 16 30 H 0.10 -0.48 8.14 -2.39 -0.02 -0.50 16 31 H 0.07 -0.08 8.14 -2.39 -0.02 -0.10 16 32 H 0.06 0.55 5.88 -2.39 -0.01 0.53 16 33 H 0.09 -0.02 8.14 -2.38 -0.02 -0.04 16 34 H 0.06 0.17 8.14 -2.39 -0.02 0.15 16 35 H 0.40 -0.64 6.27 -92.71 -0.58 -1.22 16 36 H 0.08 -0.58 8.14 -2.38 -0.02 -0.60 16 37 H 0.14 -1.47 8.14 -2.39 -0.02 -1.49 16 38 H 0.41 -0.88 5.64 -92.70 -0.52 -1.40 16 39 H 0.19 -1.29 4.88 -2.91 -0.01 -1.31 16 40 H 0.13 -0.64 7.96 -2.39 -0.02 -0.66 16 41 H 0.39 -2.14 8.70 -74.06 -0.64 -2.79 16 42 H -0.27 0.48 7.11 99.48 0.71 1.19 16 43 H -0.30 -1.02 7.11 99.48 0.71 -0.31 16 44 H 0.15 -0.11 8.06 -2.91 -0.02 -0.13 16 45 H 0.12 -0.65 8.14 -2.39 -0.02 -0.67 16 46 H 0.06 0.14 8.14 -2.39 -0.02 0.12 16 Total: 0.00 -17.24 373.54 -0.42 -17.66 By element: Atomic # 1 Polarization: -8.24 SS G_CDS: -0.67 Total: -8.91 kcal Atomic # 6 Polarization: 5.66 SS G_CDS: 6.06 Total: 11.72 kcal Atomic # 7 Polarization: -0.86 SS G_CDS: -6.38 Total: -7.24 kcal Atomic # 8 Polarization: -9.38 SS G_CDS: -2.23 Total: -11.61 kcal Atomic # 9 Polarization: -0.63 SS G_CDS: 0.75 Total: 0.12 kcal Atomic # 14 Polarization: -3.79 SS G_CDS: 2.05 Total: -1.74 kcal Total: -17.24 -0.42 -17.66 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_13941096_17656566.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -55.680 kcal (2) G-P(sol) polarization free energy of solvation -17.236 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -72.916 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.424 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.660 kcal (6) G-S(sol) free energy of system = (1) + (5) -73.340 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.06 seconds