Wall clock time and date at job start Mon Mar 8 2021 04:44:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45197 * 1 3 3 C 1.34226 * 116.99941 * 2 1 4 4 O 1.20829 * 119.99736 * 359.97438 * 3 2 1 5 5 C 1.50695 * 120.00366 * 179.97438 * 3 2 1 6 6 N 1.46500 * 112.84963 * 35.88035 * 5 3 2 7 7 C 1.34778 * 119.99615 * 74.50238 * 6 5 3 8 8 O 1.21511 * 120.00441 * 354.76158 * 7 6 5 9 9 O 1.34637 * 119.99852 * 175.03203 * 7 6 5 10 10 C 1.45205 * 117.00163 * 179.72719 * 9 7 6 11 11 C 1.52995 * 109.47150 * 60.00052 * 10 9 7 12 12 C 1.53003 * 109.46969 * 180.02562 * 10 9 7 13 13 C 1.53001 * 109.46772 * 299.99674 * 10 9 7 14 14 C 1.53781 * 113.69062 * 264.61389 * 5 3 2 15 15 C 1.53786 * 87.08320 * 220.00325 * 14 5 3 16 16 H 1.08993 * 113.69418 * 270.87424 * 15 14 5 17 17 N 1.46497 * 113.61067 * 139.97753 * 15 14 5 18 18 C 1.38406 * 119.99883 * 107.50812 * 17 15 14 19 19 N 1.32499 * 119.21678 * 359.72729 * 18 17 15 20 20 C 1.32276 * 120.74192 * 179.71757 * 19 18 17 21 21 C 1.38604 * 119.19590 * 0.54513 * 20 19 18 22 22 C 1.50702 * 120.72153 * 179.70820 * 21 20 19 23 23 O 1.42897 * 109.47243 * 245.02448 * 22 21 20 24 24 Si 1.86298 * 109.46950 * 5.02249 * 22 21 20 25 25 C 1.38604 * 118.55868 * 359.72996 * 21 20 19 26 26 N 1.32272 * 119.19656 * 0.02562 * 25 21 20 27 27 C 1.53778 * 113.61820 * 167.07855 * 5 3 2 28 28 H 1.09004 * 109.46728 * 180.02562 * 1 2 3 29 29 H 1.08992 * 109.47545 * 300.00304 * 1 2 3 30 30 H 1.09002 * 109.46839 * 60.00688 * 1 2 3 31 31 H 0.96995 * 120.00532 * 254.50266 * 6 5 3 32 32 H 1.09000 * 109.47491 * 60.00018 * 11 10 9 33 33 H 1.08996 * 109.46926 * 180.02562 * 11 10 9 34 34 H 1.09001 * 109.46847 * 300.00080 * 11 10 9 35 35 H 1.08994 * 109.47146 * 59.99927 * 12 10 9 36 36 H 1.09001 * 109.46955 * 180.02562 * 12 10 9 37 37 H 1.09000 * 109.46845 * 299.99476 * 12 10 9 38 38 H 1.09001 * 109.46801 * 60.00505 * 13 10 9 39 39 H 1.09001 * 109.46568 * 179.97438 * 13 10 9 40 40 H 1.08994 * 109.47717 * 300.00302 * 13 10 9 41 41 H 1.09001 * 113.61691 * 334.55806 * 14 5 3 42 42 H 1.09001 * 113.61219 * 105.45769 * 14 5 3 43 43 H 0.96997 * 120.00575 * 287.50369 * 17 15 14 44 44 H 1.08003 * 120.40079 * 180.25597 * 20 19 18 45 45 H 1.08994 * 109.47034 * 125.02314 * 22 21 20 46 46 H 0.96702 * 113.99994 * 59.99649 * 23 22 21 47 47 H 1.48505 * 109.99870 * 58.68489 * 24 22 21 48 48 H 1.48500 * 110.00026 * 179.97438 * 24 22 21 49 49 H 1.08001 * 120.40359 * 180.02562 * 25 21 20 50 50 H 1.09001 * 113.61608 * 254.61619 * 27 5 3 51 51 H 1.09003 * 113.61545 * 25.43455 * 27 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0613 1.1960 0.0000 4 8 1.4032 2.2093 -0.0005 5 6 3.5662 1.2750 0.0006 6 7 4.1920 0.2123 -0.7902 7 6 4.1637 0.2686 -2.1365 8 8 3.5386 1.1483 -2.6949 9 8 4.8237 -0.6532 -2.8628 10 6 4.7444 -0.5344 -4.3078 11 6 5.3169 0.8168 -4.7405 12 6 5.5498 -1.6616 -4.9572 13 6 3.2825 -0.6336 -4.7482 14 6 4.1758 1.4396 1.4028 15 6 5.1717 2.4249 0.7683 16 1 6.0766 1.9499 0.3896 17 7 5.4504 3.5963 1.6028 18 6 6.6737 3.7176 2.2387 19 7 7.5793 2.7625 2.0864 20 6 8.7603 2.8503 2.6758 21 6 9.0400 3.9522 3.4687 22 6 10.3718 4.0841 4.1615 23 8 10.1794 4.0359 5.5766 24 14 11.4852 2.6851 3.6381 25 6 8.0680 4.9300 3.6109 26 7 6.9093 4.7832 2.9900 27 6 4.1096 2.6786 -0.3146 28 1 -0.3633 -1.0277 0.0005 29 1 -0.3634 0.5138 0.8899 30 1 -0.3633 0.5137 -0.8901 31 1 4.6266 -0.5318 -0.3449 32 1 6.3583 0.8876 -4.4268 33 1 5.2569 0.9062 -5.8252 34 1 4.7427 1.6196 -4.2779 35 1 5.1415 -2.6240 -4.6488 36 1 5.4906 -1.5721 -6.0419 37 1 6.5913 -1.5913 -4.6435 38 1 2.7084 0.1692 -4.2855 39 1 3.2230 -0.5440 -5.8328 40 1 2.8746 -1.5962 -4.4398 41 1 3.4998 1.9037 2.1210 42 1 4.6430 0.5321 1.7851 43 1 4.7777 4.2869 1.7096 44 1 9.4959 2.0705 2.5446 45 1 10.8303 5.0347 3.8893 46 1 9.7743 3.2159 5.8908 47 1 11.6675 2.7052 2.1645 48 1 12.8021 2.8040 4.3140 49 1 8.2544 5.8013 4.2213 50 1 4.5234 2.7713 -1.3187 51 1 3.4150 3.4814 -0.0672 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_13976898_12175864.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:44:32 Heat of formation + Delta-G solvation = -92.314758 kcal Electronic energy + Delta-G solvation = -36561.263225 eV Core-core repulsion = 31657.904419 eV Total energy + Delta-G solvation = -4903.358805 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 381.182 amu Computer time = 1.33 seconds Orbital eigenvalues (eV) -42.68787 -42.05809 -41.40430 -40.16793 -38.25689 -37.88617 -37.38066 -36.09915 -35.18872 -34.73882 -33.83178 -31.98032 -29.31555 -28.35390 -28.31662 -27.40542 -27.20324 -26.23939 -25.72627 -23.91339 -23.39514 -22.34990 -21.16443 -20.68475 -19.47756 -19.35836 -19.24990 -18.56959 -18.09857 -17.91242 -17.43403 -17.30579 -17.01347 -16.70832 -16.57585 -16.16502 -16.04318 -15.77001 -15.64166 -15.54500 -15.30433 -14.85615 -14.62483 -14.49175 -14.39075 -14.09991 -13.83774 -13.74172 -13.62445 -13.41925 -13.22386 -13.15625 -13.08343 -12.88993 -12.85510 -12.63819 -12.46960 -12.32256 -12.24874 -12.18227 -11.88160 -11.80154 -11.78337 -11.73560 -11.40577 -11.32798 -11.01590 -10.62800 -10.43750 -10.05665 -9.20109 -5.14455 0.01453 0.11698 0.80133 1.16250 1.19293 1.42798 1.53728 1.72448 1.90313 1.93140 2.73661 2.85827 2.94958 3.04016 3.09137 3.36734 3.40264 3.56172 3.62274 3.67523 3.73986 3.74159 3.80163 3.93808 3.96756 4.15429 4.15659 4.24520 4.28699 4.37669 4.42458 4.46944 4.53976 4.57634 4.60443 4.61033 4.66099 4.72310 4.76158 4.80873 4.85798 4.90538 5.01706 5.08642 5.22344 5.33185 5.33869 5.39086 5.50139 5.70033 5.93017 6.22037 6.33289 6.48669 6.66697 7.23164 7.28255 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.351 6.351 3 C 0.472 3.528 4 O -0.491 6.491 5 C 0.179 3.821 6 N -0.686 5.686 7 C 0.656 3.344 8 O -0.556 6.556 9 O -0.359 6.359 10 C 0.137 3.863 11 C -0.185 4.185 12 C -0.142 4.142 13 C -0.185 4.185 14 C -0.138 4.138 15 C 0.147 3.853 16 H 0.131 0.869 17 N -0.683 5.683 18 C 0.568 3.432 19 N -0.562 5.562 20 C 0.200 3.800 21 C -0.292 4.292 22 C -0.046 4.046 23 O -0.540 6.540 24 Si 0.680 3.320 25 C 0.224 3.776 26 N -0.567 5.567 27 C -0.129 4.129 28 H 0.103 0.897 29 H 0.065 0.935 30 H 0.064 0.936 31 H 0.417 0.583 32 H 0.061 0.939 33 H 0.072 0.928 34 H 0.087 0.913 35 H 0.068 0.932 36 H 0.082 0.918 37 H 0.068 0.932 38 H 0.086 0.914 39 H 0.072 0.928 40 H 0.061 0.939 41 H 0.111 0.889 42 H 0.100 0.900 43 H 0.418 0.582 44 H 0.167 0.833 45 H 0.116 0.884 46 H 0.379 0.621 47 H -0.255 1.255 48 H -0.251 1.251 49 H 0.171 0.829 50 H 0.101 0.899 51 H 0.117 0.883 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.647 -5.503 1.156 5.860 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.267 6.267 3 C 0.312 3.688 4 O -0.376 6.376 5 C 0.090 3.910 6 N -0.348 5.348 7 C 0.410 3.590 8 O -0.444 6.444 9 O -0.273 6.273 10 C 0.101 3.899 11 C -0.242 4.242 12 C -0.199 4.199 13 C -0.242 4.242 14 C -0.177 4.177 15 C 0.041 3.959 16 H 0.148 0.852 17 N -0.319 5.319 18 C 0.212 3.788 19 N -0.284 5.284 20 C 0.033 3.967 21 C -0.301 4.301 22 C -0.159 4.159 23 O -0.345 6.345 24 Si 0.582 3.418 25 C 0.056 3.944 26 N -0.288 5.288 27 C -0.168 4.168 28 H 0.122 0.878 29 H 0.084 0.916 30 H 0.083 0.917 31 H 0.254 0.746 32 H 0.080 0.920 33 H 0.091 0.909 34 H 0.106 0.894 35 H 0.087 0.913 36 H 0.101 0.899 37 H 0.087 0.913 38 H 0.105 0.895 39 H 0.091 0.909 40 H 0.080 0.920 41 H 0.130 0.870 42 H 0.119 0.881 43 H 0.257 0.743 44 H 0.184 0.816 45 H 0.133 0.867 46 H 0.226 0.774 47 H -0.180 1.180 48 H -0.175 1.175 49 H 0.188 0.812 50 H 0.119 0.881 51 H 0.135 0.865 Dipole moment (debyes) X Y Z Total from point charges 1.209 -4.673 -0.241 4.833 hybrid contribution 0.136 0.594 0.415 0.737 sum 1.346 -4.079 0.174 4.299 Atomic orbital electron populations 1.23343 0.75828 1.04035 1.02783 1.86514 1.23755 1.32904 1.83523 1.23527 0.91041 0.81867 0.72384 1.90700 1.66050 1.36379 1.44502 1.20688 0.85022 0.90163 0.95162 1.44108 1.60865 1.26887 1.02917 1.18001 0.78035 0.80581 0.82367 1.90965 1.45461 1.37565 1.70361 1.86317 1.68128 1.51114 1.21766 1.22160 0.96886 0.97076 0.73782 1.22532 1.01726 0.97188 1.02761 1.21882 1.00312 0.97213 1.00493 1.22524 0.95190 1.03791 1.02668 1.23914 0.98743 1.02131 0.92941 1.22441 0.97923 0.85628 0.89932 0.85166 1.44075 1.12592 1.24780 1.50411 1.19384 0.86983 0.85412 0.87028 1.67876 1.03154 1.29786 1.27565 1.22765 0.91844 0.94375 0.87748 1.21730 1.00962 0.99929 1.07439 1.24709 0.97338 1.09957 0.83886 1.86518 1.84693 1.44087 1.19219 0.95051 0.80692 0.85290 0.80799 1.22859 0.85612 0.96218 0.89732 1.67990 1.23750 1.23654 1.13377 1.23758 0.97556 0.94039 1.01431 0.87822 0.91634 0.91697 0.74587 0.92001 0.90860 0.89433 0.91299 0.89888 0.91301 0.89514 0.90865 0.92015 0.87029 0.88138 0.74301 0.81611 0.86685 0.77363 1.17965 1.17521 0.81220 0.88096 0.86495 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.00 10.56 101.05 1.07 1.07 16 2 O -0.35 -0.72 10.42 -39.25 -0.41 -1.12 16 3 C 0.47 1.26 6.88 36.00 0.25 1.50 16 4 O -0.49 -2.51 15.66 -18.75 -0.29 -2.80 16 5 C 0.18 -0.02 1.01 -132.16 -0.13 -0.15 16 6 N -0.69 0.38 4.99 -52.79 -0.26 0.11 16 7 C 0.66 1.34 7.55 54.06 0.41 1.75 16 8 O -0.56 -2.44 10.31 -19.28 -0.20 -2.64 16 9 O -0.36 -0.56 9.94 -40.32 -0.40 -0.96 16 10 C 0.14 0.10 1.13 -90.62 -0.10 0.00 16 11 C -0.18 -0.14 8.37 37.15 0.31 0.17 16 12 C -0.14 0.17 8.85 37.16 0.33 0.50 16 13 C -0.18 -0.19 8.37 37.16 0.31 0.12 16 14 C -0.14 0.31 7.18 -25.92 -0.19 0.13 16 15 C 0.15 -0.19 4.16 -67.12 -0.28 -0.47 16 16 H 0.13 -0.11 7.37 -51.93 -0.38 -0.49 16 17 N -0.68 0.16 5.50 -55.00 -0.30 -0.14 16 18 C 0.57 0.90 8.43 -322.80 -2.72 -1.82 16 19 N -0.56 -0.54 9.13 -13.93 -0.13 -0.67 16 20 C 0.20 -0.15 9.92 -17.23 -0.17 -0.32 16 21 C -0.29 0.24 5.36 -104.35 -0.56 -0.32 16 22 C -0.05 0.08 2.83 36.01 0.10 0.18 16 23 O -0.54 0.66 12.85 -35.23 -0.45 0.21 16 24 Si 0.68 -1.67 29.88 -169.99 -5.08 -6.75 16 25 C 0.22 0.10 10.99 -17.23 -0.19 -0.08 16 26 N -0.57 -1.20 10.46 -13.93 -0.15 -1.35 16 27 C -0.13 0.00 6.48 -25.92 -0.17 -0.17 16 28 H 0.10 -0.25 8.14 -51.93 -0.42 -0.67 16 29 H 0.06 -0.02 8.13 -51.93 -0.42 -0.44 16 30 H 0.06 0.05 8.13 -51.93 -0.42 -0.37 16 31 H 0.42 -1.24 8.85 -40.82 -0.36 -1.60 16 32 H 0.06 0.03 8.14 -51.93 -0.42 -0.40 16 33 H 0.07 -0.03 8.14 -51.93 -0.42 -0.45 16 34 H 0.09 0.24 5.88 -51.93 -0.31 -0.06 16 35 H 0.07 -0.09 8.14 -51.93 -0.42 -0.51 16 36 H 0.08 -0.20 8.14 -51.93 -0.42 -0.62 16 37 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 38 H 0.09 0.29 5.88 -51.93 -0.31 -0.02 16 39 H 0.07 -0.02 8.14 -51.93 -0.42 -0.44 16 40 H 0.06 0.05 8.14 -51.93 -0.42 -0.37 16 41 H 0.11 -0.25 8.10 -51.93 -0.42 -0.67 16 42 H 0.10 -0.38 8.12 -51.93 -0.42 -0.81 16 43 H 0.42 -0.38 8.84 -40.82 -0.36 -0.74 16 44 H 0.17 -0.57 5.07 -52.48 -0.27 -0.84 16 45 H 0.12 -0.17 7.96 -51.93 -0.41 -0.58 16 46 H 0.38 -1.86 8.70 45.56 0.40 -1.46 16 47 H -0.25 0.01 7.11 56.52 0.40 0.42 16 48 H -0.25 -0.25 7.11 56.52 0.40 0.15 16 49 H 0.17 -0.20 8.06 -52.49 -0.42 -0.62 16 50 H 0.10 0.14 6.80 -51.93 -0.35 -0.21 16 51 H 0.12 0.05 7.32 -51.93 -0.38 -0.33 16 LS Contribution 419.78 15.07 6.33 6.33 Total: 0.00 -9.86 419.78 -10.50 -20.36 By element: Atomic # 1 Polarization: -5.23 SS G_CDS: -7.42 Total: -12.65 kcal Atomic # 6 Polarization: 3.82 SS G_CDS: -1.73 Total: 2.08 kcal Atomic # 7 Polarization: -1.20 SS G_CDS: -0.84 Total: -2.04 kcal Atomic # 8 Polarization: -5.57 SS G_CDS: -1.75 Total: -7.32 kcal Atomic # 14 Polarization: -1.67 SS G_CDS: -5.08 Total: -6.75 kcal Total LS contribution 6.33 Total: 6.33 kcal Total: -9.86 -10.50 -20.36 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_13976898_12175864.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -71.951 kcal (2) G-P(sol) polarization free energy of solvation -9.862 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -81.813 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.501 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.363 kcal (6) G-S(sol) free energy of system = (1) + (5) -92.315 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.33 seconds