Wall clock time and date at job start Mon Mar 8 2021 04:44:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45201 * 1 3 3 C 1.34228 * 116.99866 * 2 1 4 4 O 1.20826 * 120.00369 * 0.02562 * 3 2 1 5 5 C 1.50703 * 119.99917 * 180.02562 * 3 2 1 6 6 N 1.46503 * 112.84920 * 35.51306 * 5 3 2 7 7 C 1.34771 * 120.00080 * 67.00130 * 6 5 3 8 8 O 1.21511 * 119.99795 * 354.94563 * 7 6 5 9 9 O 1.34639 * 120.00039 * 174.94839 * 7 6 5 10 10 C 1.45205 * 116.99799 * 179.97438 * 9 7 6 11 11 C 1.53000 * 109.47150 * 60.00016 * 10 9 7 12 12 C 1.52994 * 109.47285 * 299.99721 * 10 9 7 13 13 C 1.53006 * 109.46769 * 179.97438 * 10 9 7 14 14 C 1.53784 * 113.69158 * 264.24586 * 5 3 2 15 15 C 1.53776 * 87.08134 * 220.01016 * 14 5 3 16 16 H 1.09006 * 113.61368 * 270.88007 * 15 14 5 17 17 N 1.46502 * 113.69399 * 139.99403 * 15 14 5 18 18 C 1.39001 * 120.00175 * 107.45759 * 17 15 14 19 19 N 1.32398 * 119.70407 * 179.97438 * 18 17 15 20 20 C 1.31973 * 121.62039 * 180.02562 * 19 18 17 21 21 C 1.38021 * 120.85480 * 359.97438 * 20 19 18 22 22 C 1.50707 * 120.33162 * 180.02562 * 21 20 19 23 23 O 1.42898 * 109.47201 * 119.99800 * 22 21 20 24 24 Si 1.86302 * 109.47093 * 359.97438 * 22 21 20 25 25 C 1.38878 * 119.33289 * 0.02562 * 21 20 19 26 26 C 1.38300 * 118.50555 * 359.73243 * 25 21 20 27 27 C 1.53780 * 113.61466 * 166.70810 * 5 3 2 28 28 H 1.09001 * 109.47286 * 59.99927 * 1 2 3 29 29 H 1.09002 * 109.47089 * 179.97438 * 1 2 3 30 30 H 1.08999 * 109.46913 * 299.99791 * 1 2 3 31 31 H 0.97000 * 119.99978 * 246.99584 * 6 5 3 32 32 H 1.08998 * 109.47237 * 300.00031 * 11 10 9 33 33 H 1.08999 * 109.46995 * 179.97438 * 11 10 9 34 34 H 1.09000 * 109.47185 * 59.99797 * 11 10 9 35 35 H 1.08999 * 109.47305 * 180.02562 * 12 10 9 36 36 H 1.09000 * 109.47399 * 300.00191 * 12 10 9 37 37 H 1.09008 * 109.46723 * 60.00138 * 12 10 9 38 38 H 1.09000 * 109.47122 * 299.99932 * 13 10 9 39 39 H 1.09001 * 109.47234 * 59.99679 * 13 10 9 40 40 H 1.09003 * 109.46784 * 180.02562 * 13 10 9 41 41 H 1.09004 * 113.61150 * 334.55765 * 14 5 3 42 42 H 1.08998 * 113.61655 * 105.45705 * 14 5 3 43 43 H 0.97000 * 119.99284 * 287.46019 * 17 15 14 44 44 H 1.07995 * 119.56802 * 179.97438 * 20 19 18 45 45 H 1.09000 * 109.46797 * 240.00455 * 22 21 20 46 46 H 0.96695 * 114.00125 * 300.00091 * 23 22 21 47 47 H 1.48509 * 109.99898 * 58.68315 * 24 22 21 48 48 H 1.48498 * 109.99960 * 180.02562 * 24 22 21 49 49 H 1.07999 * 120.74833 * 180.02562 * 25 21 20 50 50 H 1.07998 * 120.45242 * 180.28472 * 26 25 21 51 51 H 1.08996 * 113.61491 * 254.61100 * 27 5 3 52 52 H 1.09000 * 113.61141 * 25.43444 * 27 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2094 0.0005 5 6 3.5663 1.2749 -0.0006 6 7 4.1916 0.2074 -0.7853 7 6 4.0341 0.1739 -2.1233 8 8 3.2997 0.9736 -2.6688 9 8 4.6904 -0.7458 -2.8556 10 6 4.4725 -0.7233 -4.2911 11 6 4.9048 0.6332 -4.8514 12 6 2.9879 -0.9469 -4.5851 13 6 5.2960 -1.8322 -4.9493 14 6 4.1766 1.4479 1.4003 15 6 5.1720 2.4294 0.7595 16 1 6.0763 1.9508 0.3835 17 7 5.4528 3.6063 1.5855 18 6 6.6819 3.7313 2.2224 19 7 6.9295 4.7977 2.9671 20 6 8.0833 4.9552 3.5881 21 6 9.0795 4.0057 3.4824 22 6 10.3924 4.1973 4.1971 23 8 10.5994 3.1180 5.1105 24 14 10.3602 5.8071 5.1343 25 6 8.8598 2.8721 2.7108 26 6 7.6391 2.7322 2.0759 27 6 4.1096 2.6766 -0.3245 28 1 -0.3634 0.5138 -0.8900 29 1 -0.3633 -1.0277 -0.0005 30 1 -0.3633 0.5138 0.8900 31 1 4.7191 -0.4752 -0.3418 32 1 4.3185 1.4235 -4.3825 33 1 4.7416 0.6499 -5.9290 34 1 5.9625 0.7925 -4.6419 35 1 2.8244 -0.9305 -5.6627 36 1 2.6799 -1.9134 -4.1860 37 1 2.4016 -0.1566 -4.1162 38 1 6.3537 -1.6725 -4.7398 39 1 4.9886 -2.7988 -4.5501 40 1 5.1328 -1.8151 -6.0269 41 1 3.5009 1.9164 2.1161 42 1 4.6439 0.5427 1.7879 43 1 4.7808 4.2984 1.6878 44 1 8.2501 5.8384 4.1868 45 1 11.2030 4.2175 3.4687 46 1 9.9144 3.0394 5.7883 47 1 9.2394 5.8053 6.1086 48 1 11.6495 6.0081 5.8430 49 1 9.6232 2.1146 2.6125 50 1 7.4330 1.8610 1.4718 51 1 4.5230 2.7632 -1.3293 52 1 3.4151 3.4808 -0.0816 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_13976898_13915762.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:44:36 Heat of formation + Delta-G solvation = -108.555958 kcal Electronic energy + Delta-G solvation = -36361.087624 eV Core-core repulsion = 31522.450458 eV Total energy + Delta-G solvation = -4838.637166 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 380.187 amu Computer time = 1.33 seconds Orbital eigenvalues (eV) -42.71473 -41.52723 -41.32701 -40.16217 -38.25415 -37.88387 -37.38450 -36.04528 -35.18799 -33.85774 -33.30139 -31.24903 -29.30276 -28.38099 -28.34373 -27.38730 -27.20248 -25.93193 -24.89497 -23.97249 -23.11997 -22.02286 -21.21438 -20.65223 -19.40127 -19.22393 -18.83312 -18.52871 -18.07804 -17.56966 -17.36653 -17.27137 -16.97872 -16.71648 -16.49803 -16.32220 -15.96812 -15.69586 -15.43205 -15.36518 -15.29476 -14.72496 -14.51732 -14.40320 -14.32004 -14.04903 -13.86494 -13.79739 -13.68237 -13.45464 -13.30149 -13.17837 -13.09647 -12.92313 -12.88867 -12.71083 -12.52288 -12.43674 -12.33045 -12.22592 -11.95050 -11.79105 -11.73889 -11.37502 -11.27585 -11.08055 -10.81050 -10.55087 -10.50341 -10.39506 -8.80744 -4.95923 0.19281 0.38108 0.76202 1.12968 1.29422 1.44144 1.59559 1.75771 1.97055 2.05334 2.74693 2.79313 2.89585 2.99342 3.26343 3.36886 3.49483 3.58416 3.70946 3.73646 3.77114 3.79687 3.91045 3.93897 4.04796 4.14633 4.18912 4.24316 4.25191 4.30622 4.34045 4.50459 4.51859 4.55676 4.57997 4.58398 4.62588 4.69112 4.72522 4.73548 4.82786 4.87742 4.95156 4.98824 5.06126 5.25950 5.31145 5.32254 5.35946 5.44451 5.46478 5.89495 6.15885 6.40026 6.43663 6.65322 7.10388 7.23472 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.351 6.351 3 C 0.475 3.525 4 O -0.491 6.491 5 C 0.178 3.822 6 N -0.688 5.688 7 C 0.656 3.344 8 O -0.554 6.554 9 O -0.359 6.359 10 C 0.137 3.863 11 C -0.185 4.185 12 C -0.184 4.184 13 C -0.142 4.142 14 C -0.140 4.140 15 C 0.139 3.861 16 H 0.120 0.880 17 N -0.709 5.709 18 C 0.408 3.592 19 N -0.537 5.537 20 C 0.157 3.843 21 C -0.232 4.232 22 C -0.059 4.059 23 O -0.532 6.532 24 Si 0.677 3.323 25 C -0.005 4.005 26 C -0.239 4.239 27 C -0.126 4.126 28 H 0.065 0.935 29 H 0.103 0.897 30 H 0.065 0.935 31 H 0.416 0.584 32 H 0.087 0.913 33 H 0.073 0.927 34 H 0.061 0.939 35 H 0.073 0.927 36 H 0.061 0.939 37 H 0.086 0.914 38 H 0.068 0.932 39 H 0.068 0.932 40 H 0.083 0.917 41 H 0.114 0.886 42 H 0.099 0.901 43 H 0.410 0.590 44 H 0.156 0.844 45 H 0.117 0.883 46 H 0.375 0.625 47 H -0.258 1.258 48 H -0.256 1.256 49 H 0.137 0.863 50 H 0.133 0.867 51 H 0.097 0.903 52 H 0.119 0.881 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.339 -3.087 -1.195 3.571 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.059 4.059 2 O -0.267 6.267 3 C 0.315 3.685 4 O -0.376 6.376 5 C 0.089 3.911 6 N -0.350 5.350 7 C 0.410 3.590 8 O -0.442 6.442 9 O -0.274 6.274 10 C 0.101 3.899 11 C -0.242 4.242 12 C -0.242 4.242 13 C -0.199 4.199 14 C -0.180 4.180 15 C 0.032 3.968 16 H 0.138 0.862 17 N -0.341 5.341 18 C 0.173 3.827 19 N -0.253 5.253 20 C 0.000 4.000 21 C -0.237 4.237 22 C -0.170 4.170 23 O -0.338 6.338 24 Si 0.579 3.421 25 C -0.030 4.030 26 C -0.264 4.264 27 C -0.165 4.165 28 H 0.083 0.917 29 H 0.121 0.879 30 H 0.083 0.917 31 H 0.253 0.747 32 H 0.106 0.894 33 H 0.092 0.908 34 H 0.080 0.920 35 H 0.092 0.908 36 H 0.080 0.920 37 H 0.105 0.895 38 H 0.087 0.913 39 H 0.087 0.913 40 H 0.102 0.898 41 H 0.133 0.867 42 H 0.117 0.883 43 H 0.247 0.753 44 H 0.173 0.827 45 H 0.135 0.865 46 H 0.223 0.777 47 H -0.183 1.183 48 H -0.180 1.180 49 H 0.154 0.846 50 H 0.151 0.849 51 H 0.116 0.884 52 H 0.137 0.863 Dipole moment (debyes) X Y Z Total from point charges 0.680 -1.644 -1.188 2.139 hybrid contribution -0.187 -1.740 0.605 1.852 sum 0.492 -3.384 -0.583 3.469 Atomic orbital electron populations 1.23339 0.75782 1.04009 1.02793 1.86505 1.23782 1.32879 1.83528 1.23385 0.90906 0.81893 0.72362 1.90701 1.66017 1.36357 1.44533 1.20722 0.85380 0.89873 0.95126 1.44141 1.56304 1.30747 1.03787 1.17992 0.78783 0.79950 0.82269 1.90973 1.40159 1.42287 1.70757 1.86314 1.65521 1.53208 1.22336 1.22171 0.96582 0.97156 0.73994 1.22533 1.02323 0.97073 1.02264 1.22521 0.94911 1.03555 1.03167 1.21886 1.00219 0.97332 1.00472 1.23965 0.99019 1.01893 0.93114 1.22420 0.97484 0.86245 0.90662 0.86189 1.44392 1.14113 1.23866 1.51710 1.18400 0.86207 0.89418 0.88715 1.67160 1.22945 1.22851 1.12364 1.22234 0.87087 0.96790 0.93919 1.20954 0.98687 0.98443 1.05620 1.24752 0.96469 1.00075 0.95692 1.86591 1.52373 1.50357 1.44467 0.95149 0.80533 0.81716 0.84737 1.21196 0.95581 0.95591 0.90680 1.21468 0.95216 1.01695 1.07977 1.23727 0.97475 0.94319 1.01009 0.91654 0.87861 0.91650 0.74713 0.89426 0.90818 0.92009 0.90838 0.92018 0.89519 0.91310 0.91311 0.89842 0.86722 0.88263 0.75265 0.82739 0.86522 0.77714 1.18282 1.18045 0.84560 0.84889 0.88431 0.86329 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.01 10.56 101.05 1.07 1.07 16 2 O -0.35 -0.72 10.41 -39.25 -0.41 -1.13 16 3 C 0.47 1.18 6.42 36.01 0.23 1.41 16 4 O -0.49 -2.45 15.66 -18.75 -0.29 -2.74 16 5 C 0.18 -0.13 1.00 -132.15 -0.13 -0.26 16 6 N -0.69 0.88 5.02 -52.78 -0.26 0.61 16 7 C 0.66 1.01 7.53 54.05 0.41 1.42 16 8 O -0.55 -2.25 10.60 -19.28 -0.20 -2.45 16 9 O -0.36 -0.40 9.94 -40.32 -0.40 -0.80 16 10 C 0.14 0.05 1.13 -90.62 -0.10 -0.05 16 11 C -0.18 -0.07 8.37 37.16 0.31 0.24 16 12 C -0.18 -0.14 8.37 37.15 0.31 0.17 16 13 C -0.14 0.22 8.85 37.16 0.33 0.55 16 14 C -0.14 0.44 7.17 -25.92 -0.19 0.25 16 15 C 0.14 -0.38 3.93 -67.12 -0.26 -0.64 16 16 H 0.12 -0.45 6.11 -51.93 -0.32 -0.77 16 17 N -0.71 0.81 5.53 -53.14 -0.29 0.51 16 18 C 0.41 0.27 7.65 -155.02 -1.19 -0.92 16 19 N -0.54 -1.09 10.39 -12.44 -0.13 -1.22 16 20 C 0.16 0.10 9.84 -17.57 -0.17 -0.08 16 21 C -0.23 0.02 5.40 -104.46 -0.56 -0.54 16 22 C -0.06 0.04 2.84 36.01 0.10 0.14 16 23 O -0.53 -0.35 12.78 -35.23 -0.45 -0.80 16 24 Si 0.68 -0.79 29.82 -169.99 -5.07 -5.86 16 25 C 0.00 0.00 9.77 -39.32 -0.38 -0.38 16 26 C -0.24 0.14 9.28 -39.23 -0.36 -0.23 16 27 C -0.13 0.11 6.59 -25.92 -0.17 -0.06 16 28 H 0.06 0.06 8.13 -51.93 -0.42 -0.36 16 29 H 0.10 -0.23 8.14 -51.93 -0.42 -0.65 16 30 H 0.06 -0.02 8.13 -51.93 -0.42 -0.44 16 31 H 0.42 -1.61 8.78 -40.82 -0.36 -1.97 16 32 H 0.09 0.21 5.88 -51.93 -0.31 -0.09 16 33 H 0.07 -0.05 8.14 -51.93 -0.42 -0.47 16 34 H 0.06 0.00 8.14 -51.93 -0.42 -0.43 16 35 H 0.07 -0.04 8.14 -51.93 -0.42 -0.46 16 36 H 0.06 0.04 8.14 -51.93 -0.42 -0.39 16 37 H 0.09 0.27 5.88 -51.92 -0.31 -0.04 16 38 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 39 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 40 H 0.08 -0.22 8.14 -51.93 -0.42 -0.64 16 41 H 0.11 -0.30 8.10 -51.93 -0.42 -0.72 16 42 H 0.10 -0.50 8.09 -51.93 -0.42 -0.92 16 43 H 0.41 -0.47 8.85 -40.82 -0.36 -0.83 16 44 H 0.16 -0.19 4.88 -52.49 -0.26 -0.44 16 45 H 0.12 -0.17 7.96 -51.93 -0.41 -0.58 16 46 H 0.38 -0.73 8.70 45.56 0.40 -0.34 16 47 H -0.26 -0.22 7.11 56.52 0.40 0.18 16 48 H -0.26 -0.55 7.11 56.52 0.40 -0.15 16 49 H 0.14 -0.20 8.06 -52.49 -0.42 -0.62 16 50 H 0.13 -0.37 6.04 -52.49 -0.32 -0.68 16 51 H 0.10 0.02 7.41 -51.93 -0.38 -0.37 16 52 H 0.12 -0.01 7.32 -51.93 -0.38 -0.39 16 LS Contribution 422.54 15.07 6.37 6.37 Total: 0.00 -9.47 422.54 -9.61 -19.07 By element: Atomic # 1 Polarization: -5.96 SS G_CDS: -7.69 Total: -13.65 kcal Atomic # 6 Polarization: 2.87 SS G_CDS: -0.77 Total: 2.10 kcal Atomic # 7 Polarization: 0.59 SS G_CDS: -0.69 Total: -0.10 kcal Atomic # 8 Polarization: -6.17 SS G_CDS: -1.76 Total: -7.93 kcal Atomic # 14 Polarization: -0.79 SS G_CDS: -5.07 Total: -5.86 kcal Total LS contribution 6.37 Total: 6.37 kcal Total: -9.47 -9.61 -19.07 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_13976898_13915762.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -89.484 kcal (2) G-P(sol) polarization free energy of solvation -9.467 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -98.951 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.605 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.072 kcal (6) G-S(sol) free energy of system = (1) + (5) -108.556 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.33 seconds