Wall clock time and date at job start Mon Mar 8 2021 07:20:21 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53000 * 1 3 3 C 1.53006 * 109.47076 * 2 1 4 4 C 1.52997 * 109.47061 * 239.99804 * 2 1 3 5 5 O 1.45203 * 109.47240 * 119.99695 * 2 1 3 6 6 C 1.34229 * 116.99579 * 59.99972 * 5 2 1 7 7 O 1.20819 * 120.00199 * 0.02562 * 6 5 2 8 8 C 1.50706 * 119.99505 * 179.97438 * 6 5 2 9 9 H 1.08992 * 109.47518 * 300.00344 * 8 6 5 10 10 C 1.53002 * 109.46783 * 60.00307 * 8 6 5 11 11 C 1.52997 * 109.46817 * 179.97438 * 10 8 6 12 12 C 1.53005 * 109.47452 * 300.00239 * 11 10 8 13 13 H 1.09002 * 109.46935 * 300.00125 * 12 11 10 14 14 C 1.53002 * 109.47197 * 180.02562 * 12 11 10 15 15 N 1.46504 * 109.46806 * 175.00000 * 14 12 11 16 16 C 1.38408 * 119.99752 * 179.97438 * 15 14 12 17 17 N 1.32492 * 119.21684 * 359.72779 * 16 15 14 18 18 C 1.32280 * 120.73841 * 179.71779 * 17 16 15 19 19 C 1.38599 * 119.19810 * 0.54777 * 18 17 16 20 20 C 1.50699 * 120.72481 * 179.70714 * 19 18 17 21 21 O 1.42895 * 109.47497 * 120.01934 * 20 19 18 22 22 Si 1.86303 * 109.46640 * 0.02562 * 20 19 18 23 23 C 1.38606 * 118.55828 * 359.72835 * 19 18 17 24 24 N 1.32285 * 119.19731 * 0.02562 * 23 19 18 25 25 C 1.52999 * 109.47159 * 59.99536 * 12 11 10 26 26 C 1.52997 * 109.47317 * 300.00546 * 25 12 11 27 27 H 1.09000 * 109.47115 * 300.00085 * 1 2 3 28 28 H 1.08998 * 109.47349 * 60.00296 * 1 2 3 29 29 H 1.08997 * 109.47153 * 180.02562 * 1 2 3 30 30 H 1.08993 * 109.46973 * 179.97438 * 3 2 1 31 31 H 1.08998 * 109.46790 * 300.00046 * 3 2 1 32 32 H 1.09000 * 109.47218 * 59.99978 * 3 2 1 33 33 H 1.09001 * 109.47231 * 299.99975 * 4 2 1 34 34 H 1.09005 * 109.46960 * 60.00056 * 4 2 1 35 35 H 1.09003 * 109.47003 * 179.97438 * 4 2 1 36 36 H 1.08993 * 109.47662 * 299.99813 * 10 8 6 37 37 H 1.09002 * 109.47075 * 60.00319 * 10 8 6 38 38 H 1.09002 * 109.47153 * 60.00231 * 11 10 8 39 39 H 1.09001 * 109.47289 * 180.02562 * 11 10 8 40 40 H 1.09000 * 109.46791 * 294.99945 * 14 12 11 41 41 H 1.08998 * 109.47254 * 54.99840 * 14 12 11 42 42 H 0.96997 * 119.99996 * 359.97438 * 15 14 12 43 43 H 1.08005 * 120.39677 * 180.29571 * 18 17 16 44 44 H 1.08999 * 109.47072 * 240.02373 * 20 19 18 45 45 H 0.96705 * 113.99544 * 300.00672 * 21 20 19 46 46 H 1.48502 * 109.99806 * 180.02562 * 22 20 19 47 47 H 1.48500 * 110.00160 * 301.31574 * 22 20 19 48 48 H 1.07997 * 120.40742 * 179.97438 * 23 19 18 49 49 H 1.08996 * 109.46929 * 179.97438 * 25 12 11 50 50 H 1.09002 * 109.46716 * 60.00455 * 25 12 11 51 51 H 1.09002 * 109.47153 * 299.99641 * 26 25 12 52 52 H 1.09001 * 109.46832 * 179.97438 * 26 25 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4426 0.0000 4 6 2.0400 -0.7213 -1.2492 5 8 2.0140 -0.6844 1.1856 6 6 1.6533 -1.9683 1.3379 7 8 0.9567 -2.5027 0.5079 8 6 2.1183 -2.7436 2.5437 9 1 3.2078 -2.7725 2.5592 10 6 1.6081 -2.0629 3.8154 11 6 2.0797 -2.8503 5.0396 12 6 1.5321 -4.2774 4.9701 13 1 0.4426 -4.2481 4.9544 14 6 2.0032 -5.0646 6.1946 15 7 1.3832 -6.3919 6.1899 16 6 1.6615 -7.2893 7.2062 17 7 2.4950 -6.9336 8.1727 18 6 2.7780 -7.7654 9.1616 19 6 2.1998 -9.0250 9.1720 20 6 2.5032 -10.0023 10.2783 21 8 1.2927 -10.3464 10.9552 22 14 3.6901 -9.2247 11.4855 23 6 1.3368 -9.3665 8.1426 24 7 1.0925 -8.4856 7.1863 25 6 2.0422 -4.9580 3.6983 26 6 1.5707 -4.1706 2.4742 27 1 -0.3633 0.5138 0.8900 28 1 -0.3634 0.5138 -0.8900 29 1 -0.3633 -1.0276 0.0005 30 1 3.1299 1.4425 0.0005 31 1 1.6766 1.9563 -0.8900 32 1 1.6767 1.9564 0.8900 33 1 1.6766 -1.7490 -1.2492 34 1 1.6766 -0.2074 -2.1392 35 1 3.1300 -0.7209 -1.2494 36 1 1.9978 -1.0462 3.8648 37 1 0.5186 -2.0341 3.8000 38 1 3.1692 -2.8796 5.0552 39 1 1.7158 -2.3657 5.9456 40 1 3.0876 -5.1699 6.1636 41 1 1.7156 -4.5324 7.1013 42 1 0.7776 -6.6418 5.4745 43 1 3.4546 -7.4680 9.9492 44 1 2.9515 -10.9015 9.8559 45 1 0.8387 -9.5928 11.3566 46 1 3.9978 -10.1786 12.5812 47 1 4.9410 -8.8332 10.7874 48 1 0.8700 -10.3401 8.1209 49 1 1.6526 -5.9747 3.6491 50 1 3.1318 -4.9872 3.7139 51 1 0.4812 -4.1413 2.4585 52 1 1.9346 -4.6553 1.5682 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_14037212_12175864.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 07:20:21 Heat of formation + Delta-G solvation = -78.045424 kcal Electronic energy + Delta-G solvation = -30904.424527 eV Core-core repulsion = 26677.163303 eV Total energy + Delta-G solvation = -4227.261224 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 350.204 amu Computer time = 0.80 seconds Orbital eigenvalues (eV) -42.07702 -41.95461 -40.03545 -38.26613 -37.86172 -36.63411 -35.05162 -34.67004 -33.48092 -31.98623 -31.63965 -28.36981 -28.36097 -27.90718 -26.22186 -25.72913 -24.27797 -23.77905 -22.91128 -22.12020 -21.01856 -20.43066 -19.37872 -18.65211 -18.19035 -18.04075 -17.51949 -17.08389 -16.65349 -16.33193 -16.18624 -16.06642 -15.67404 -15.57329 -15.48469 -15.21293 -15.08341 -14.85628 -14.61714 -14.53794 -14.09417 -13.99963 -13.72001 -13.46075 -13.39202 -13.24539 -13.14381 -13.07086 -12.91834 -12.87424 -12.51765 -12.30669 -12.25903 -12.18979 -12.10645 -11.83866 -11.76628 -11.74611 -11.56531 -11.39321 -11.33153 -11.15625 -10.78650 -10.57643 -9.98835 -9.07055 -5.11054 0.09520 0.19358 1.22946 1.27819 1.55500 1.69400 1.83768 1.92228 2.86816 3.14457 3.37231 3.40296 3.49952 3.51388 3.63102 3.70710 3.72915 3.77246 3.78189 3.81134 3.91348 3.93770 4.02109 4.17386 4.23598 4.25058 4.31803 4.36471 4.49624 4.52593 4.57405 4.57833 4.62751 4.68172 4.73613 4.75259 4.77023 4.82311 4.85901 4.88654 4.93719 4.97519 5.04754 5.05956 5.07731 5.15652 5.24114 5.27518 5.29984 5.32656 5.62063 5.79296 6.02842 6.42567 6.51673 6.89359 7.32408 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.183 4.183 2 C 0.116 3.884 3 C -0.142 4.142 4 C -0.184 4.184 5 O -0.350 6.350 6 C 0.467 3.533 7 O -0.501 6.501 8 C -0.081 4.081 9 H 0.108 0.892 10 C -0.109 4.109 11 C -0.108 4.108 12 C -0.104 4.104 13 H 0.081 0.919 14 C 0.141 3.859 15 N -0.695 5.695 16 C 0.566 3.434 17 N -0.562 5.562 18 C 0.199 3.801 19 C -0.296 4.296 20 C -0.046 4.046 21 O -0.541 6.541 22 Si 0.682 3.318 23 C 0.223 3.777 24 N -0.570 5.570 25 C -0.115 4.115 26 C -0.103 4.103 27 H 0.061 0.939 28 H 0.072 0.928 29 H 0.082 0.918 30 H 0.067 0.933 31 H 0.079 0.921 32 H 0.067 0.933 33 H 0.083 0.917 34 H 0.072 0.928 35 H 0.061 0.939 36 H 0.080 0.920 37 H 0.069 0.931 38 H 0.072 0.928 39 H 0.075 0.925 40 H 0.070 0.930 41 H 0.071 0.929 42 H 0.415 0.585 43 H 0.166 0.834 44 H 0.115 0.885 45 H 0.379 0.621 46 H -0.251 1.251 47 H -0.255 1.255 48 H 0.170 0.830 49 H 0.069 0.931 50 H 0.069 0.931 51 H 0.073 0.927 52 H 0.074 0.926 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.763 3.941 2.030 4.498 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.240 4.240 2 C 0.080 3.920 3 C -0.199 4.199 4 C -0.241 4.241 5 O -0.267 6.267 6 C 0.310 3.690 7 O -0.389 6.389 8 C -0.100 4.100 9 H 0.126 0.874 10 C -0.147 4.147 11 C -0.146 4.146 12 C -0.123 4.123 13 H 0.099 0.901 14 C 0.017 3.983 15 N -0.332 5.332 16 C 0.210 3.790 17 N -0.284 5.284 18 C 0.031 3.969 19 C -0.304 4.304 20 C -0.158 4.158 21 O -0.346 6.346 22 Si 0.584 3.416 23 C 0.055 3.945 24 N -0.291 5.291 25 C -0.152 4.152 26 C -0.141 4.141 27 H 0.080 0.920 28 H 0.091 0.909 29 H 0.101 0.899 30 H 0.086 0.914 31 H 0.098 0.902 32 H 0.086 0.914 33 H 0.101 0.899 34 H 0.091 0.909 35 H 0.080 0.920 36 H 0.099 0.901 37 H 0.088 0.912 38 H 0.091 0.909 39 H 0.093 0.907 40 H 0.088 0.912 41 H 0.089 0.911 42 H 0.253 0.747 43 H 0.182 0.818 44 H 0.133 0.867 45 H 0.226 0.774 46 H -0.175 1.175 47 H -0.180 1.180 48 H 0.187 0.813 49 H 0.088 0.912 50 H 0.088 0.912 51 H 0.092 0.908 52 H 0.092 0.908 Dipole moment (debyes) X Y Z Total from point charges 1.397 4.058 1.152 4.443 hybrid contribution -0.172 -1.010 -0.375 1.091 sum 1.224 3.048 0.777 3.375 Atomic orbital electron populations 1.22488 0.93916 1.04688 1.02921 1.22220 0.94457 0.92362 0.82928 1.21863 1.02295 0.92463 1.03244 1.22495 1.01713 1.03102 0.96760 1.86551 1.69681 1.25334 1.45159 1.23662 0.77340 0.80686 0.87326 1.90590 1.35090 1.69939 1.43289 1.21166 1.02966 0.94796 0.91085 0.87380 1.21509 1.01557 0.99564 0.92052 1.21481 1.01486 0.93633 0.98012 1.21497 1.01461 0.95272 0.94038 0.90078 1.21404 0.97934 0.80932 0.98065 1.44200 1.50750 1.13490 1.24729 1.19396 0.86578 0.86069 0.86976 1.67928 1.19108 1.36874 1.04530 1.22782 0.92644 0.88076 0.93396 1.21703 1.07024 0.98888 1.02827 1.24696 0.94510 1.00542 0.96073 1.86506 1.37701 1.37557 1.72838 0.94958 0.79490 0.86509 0.80676 1.22828 0.89058 0.97140 0.85483 1.67995 1.28903 1.02909 1.29325 1.21625 1.01493 0.98920 0.93164 1.21436 1.01811 0.92155 0.98677 0.91958 0.90905 0.89879 0.91404 0.90211 0.91392 0.89866 0.90889 0.91968 0.90120 0.91206 0.90928 0.90661 0.91180 0.91107 0.74747 0.81750 0.86732 0.77357 1.17545 1.18029 0.81288 0.91212 0.91239 0.90779 0.90774 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.16 8.37 37.16 0.31 0.15 16 2 C 0.12 0.10 1.13 -90.62 -0.10 0.00 16 3 C -0.14 0.12 8.85 37.16 0.33 0.45 16 4 C -0.18 -0.18 8.37 37.16 0.31 0.13 16 5 O -0.35 -0.57 9.79 -39.25 -0.38 -0.96 16 6 C 0.47 0.75 6.56 36.01 0.24 0.98 16 7 O -0.50 -1.93 11.48 -18.74 -0.22 -2.15 16 8 C -0.08 0.09 2.63 -91.77 -0.24 -0.15 16 9 H 0.11 -0.22 8.14 -51.93 -0.42 -0.65 16 10 C -0.11 0.24 5.14 -26.73 -0.14 0.11 16 11 C -0.11 0.35 5.20 -26.73 -0.14 0.21 16 12 C -0.10 0.29 2.22 -90.62 -0.20 0.09 16 13 H 0.08 -0.21 8.14 -51.93 -0.42 -0.63 16 14 C 0.14 -0.21 5.04 -4.04 -0.02 -0.23 16 15 N -0.69 -0.06 5.43 -62.31 -0.34 -0.40 16 16 C 0.57 1.34 8.42 -322.81 -2.72 -1.38 16 17 N -0.56 -1.18 9.59 -13.93 -0.13 -1.32 16 18 C 0.20 0.04 9.92 -17.23 -0.17 -0.13 16 19 C -0.30 0.03 5.40 -104.35 -0.56 -0.53 16 20 C -0.05 0.06 2.85 36.01 0.10 0.16 16 21 O -0.54 0.41 12.79 -35.23 -0.45 -0.04 16 22 Si 0.68 -1.36 29.87 -169.99 -5.08 -6.43 16 23 C 0.22 0.24 10.92 -17.22 -0.19 0.05 16 24 N -0.57 -1.57 10.46 -13.93 -0.15 -1.72 16 25 C -0.11 0.27 5.08 -26.73 -0.14 0.13 16 26 C -0.10 0.11 4.49 -26.73 -0.12 -0.01 16 27 H 0.06 0.03 8.14 -51.93 -0.42 -0.39 16 28 H 0.07 -0.02 8.14 -51.93 -0.42 -0.44 16 29 H 0.08 0.23 5.89 -51.93 -0.31 -0.08 16 30 H 0.07 -0.06 8.14 -51.93 -0.42 -0.49 16 31 H 0.08 -0.16 8.14 -51.93 -0.42 -0.58 16 32 H 0.07 -0.07 8.14 -51.93 -0.42 -0.49 16 33 H 0.08 0.23 5.89 -51.93 -0.31 -0.07 16 34 H 0.07 -0.01 8.14 -51.93 -0.42 -0.44 16 35 H 0.06 0.04 8.14 -51.93 -0.42 -0.38 16 36 H 0.08 -0.17 8.11 -51.93 -0.42 -0.59 16 37 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 38 H 0.07 -0.25 8.14 -51.93 -0.42 -0.67 16 39 H 0.07 -0.26 8.14 -51.93 -0.42 -0.69 16 40 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 41 H 0.07 -0.07 8.14 -51.93 -0.42 -0.50 16 42 H 0.41 -0.32 7.77 -40.82 -0.32 -0.64 16 43 H 0.17 -0.38 5.04 -52.48 -0.26 -0.64 16 44 H 0.12 -0.11 7.96 -51.93 -0.41 -0.53 16 45 H 0.38 -1.66 8.70 45.56 0.40 -1.26 16 46 H -0.25 -0.34 7.11 56.52 0.40 0.06 16 47 H -0.26 -0.07 7.11 56.52 0.40 0.33 16 48 H 0.17 -0.10 8.06 -52.49 -0.42 -0.52 16 49 H 0.07 -0.14 7.18 -51.93 -0.37 -0.52 16 50 H 0.07 -0.15 8.14 -51.93 -0.42 -0.58 16 51 H 0.07 -0.02 8.10 -51.93 -0.42 -0.44 16 52 H 0.07 -0.01 8.10 -51.93 -0.42 -0.43 16 LS Contribution 407.15 15.07 6.14 6.14 Total: 0.00 -7.21 407.15 -12.87 -20.08 By element: Atomic # 1 Polarization: -4.45 SS G_CDS: -8.81 Total: -13.26 kcal Atomic # 6 Polarization: 3.50 SS G_CDS: -3.45 Total: 0.05 kcal Atomic # 7 Polarization: -2.82 SS G_CDS: -0.62 Total: -3.44 kcal Atomic # 8 Polarization: -2.09 SS G_CDS: -1.05 Total: -3.14 kcal Atomic # 14 Polarization: -1.36 SS G_CDS: -5.08 Total: -6.43 kcal Total LS contribution 6.14 Total: 6.14 kcal Total: -7.21 -12.87 -20.08 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_14037212_12175864.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -57.966 kcal (2) G-P(sol) polarization free energy of solvation -7.213 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -65.179 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.867 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.080 kcal (6) G-S(sol) free energy of system = (1) + (5) -78.045 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.80 seconds