Wall clock time and date at job start Mon Mar 8 2021 04:50:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53005 * 1 3 3 C 1.52994 * 109.47146 * 2 1 4 4 C 1.52994 * 109.46979 * 239.99838 * 2 1 3 5 5 O 1.45202 * 109.46758 * 119.99544 * 2 1 3 6 6 C 1.34230 * 116.99836 * 60.00621 * 5 2 1 7 7 O 1.20833 * 119.99930 * 359.97438 * 6 5 2 8 8 C 1.50697 * 120.00262 * 180.27336 * 6 5 2 9 9 H 1.09000 * 109.47461 * 59.71633 * 8 6 5 10 10 C 1.52996 * 109.47491 * 179.72204 * 8 6 5 11 11 C 1.53003 * 109.47301 * 179.97438 * 10 8 6 12 12 C 1.52996 * 109.46915 * 299.99916 * 11 10 8 13 13 H 1.09007 * 109.47078 * 179.97438 * 12 11 10 14 14 N 1.46496 * 109.47117 * 299.99845 * 12 11 10 15 15 C 1.38617 * 119.99825 * 204.99960 * 14 12 11 16 16 N 1.29684 * 124.94886 * 0.03174 * 15 14 12 17 17 C 1.32120 * 116.86516 * 179.97438 * 16 15 14 18 18 C 1.33322 * 114.58142 * 359.97438 * 17 16 15 19 19 C 1.50700 * 125.95773 * 180.02562 * 18 17 16 20 20 O 1.42906 * 109.47007 * 300.00455 * 19 18 17 21 21 Si 1.86300 * 109.47699 * 180.02562 * 19 18 17 22 22 S 1.70966 * 124.94901 * 179.71804 * 15 14 12 23 23 C 1.53003 * 109.47207 * 60.00200 * 12 11 10 24 24 C 1.53002 * 109.46796 * 299.72392 * 8 6 5 25 25 H 1.08998 * 109.47036 * 300.00110 * 1 2 3 26 26 H 1.08999 * 109.46711 * 59.99932 * 1 2 3 27 27 H 1.09001 * 109.47439 * 180.02562 * 1 2 3 28 28 H 1.09002 * 109.47633 * 179.97438 * 3 2 1 29 29 H 1.08999 * 109.47371 * 299.99664 * 3 2 1 30 30 H 1.09005 * 109.47538 * 59.99436 * 3 2 1 31 31 H 1.09001 * 109.47516 * 299.99981 * 4 2 1 32 32 H 1.08999 * 109.47211 * 60.00536 * 4 2 1 33 33 H 1.09004 * 109.47317 * 180.02562 * 4 2 1 34 34 H 1.09004 * 109.47066 * 299.99799 * 10 8 6 35 35 H 1.08994 * 109.47405 * 59.99969 * 10 8 6 36 36 H 1.09008 * 109.46785 * 59.99617 * 11 10 8 37 37 H 1.09001 * 109.47245 * 179.97438 * 11 10 8 38 38 H 0.96997 * 120.00405 * 25.00090 * 14 12 11 39 39 H 1.08001 * 122.70992 * 179.97438 * 17 16 15 40 40 H 1.09000 * 109.46969 * 59.99926 * 19 18 17 41 41 H 0.96705 * 113.99260 * 299.99511 * 20 19 18 42 42 H 1.48501 * 110.00131 * 180.02562 * 21 19 18 43 43 H 1.48496 * 109.99738 * 301.32194 * 21 19 18 44 44 H 1.08994 * 109.47116 * 59.99825 * 23 12 11 45 45 H 1.09004 * 109.47205 * 179.97438 * 23 12 11 46 46 H 1.09008 * 109.46845 * 299.99275 * 24 8 6 47 47 H 1.08993 * 109.47452 * 60.00035 * 24 8 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 6 2.0400 1.4424 0.0000 4 6 2.0400 -0.7213 -1.2492 5 8 2.0140 -0.6844 1.1856 6 6 1.6533 -1.9684 1.3379 7 8 0.9560 -2.5025 0.5082 8 6 2.1126 -2.7417 2.5471 9 1 1.7485 -2.2530 3.4508 10 6 1.5610 -4.1672 2.4805 11 6 2.0278 -4.9526 3.7079 12 6 3.5569 -4.9981 3.7329 13 1 3.8895 -5.5572 4.6075 14 7 4.0458 -5.6547 2.5180 15 6 5.2849 -6.2761 2.5169 16 7 6.0875 -6.3347 3.5338 17 6 7.2323 -6.9695 3.3550 18 6 7.4036 -7.4703 2.1313 19 6 8.6077 -8.2381 1.6499 20 8 9.7730 -7.4193 1.7674 21 14 8.3651 -8.7197 -0.1333 22 16 5.9743 -7.0836 1.1769 23 6 4.1085 -3.5725 3.7995 24 6 3.6417 -2.7872 2.5728 25 1 -0.3633 0.5138 0.8900 26 1 -0.3633 0.5139 -0.8900 27 1 -0.3634 -1.0277 0.0005 28 1 3.1301 1.4425 0.0005 29 1 1.6768 1.9563 -0.8900 30 1 1.6766 1.9564 0.8900 31 1 1.6767 -1.7489 -1.2492 32 1 1.6767 -0.2074 -2.1392 33 1 3.1300 -0.7217 -1.2490 34 1 0.4716 -4.1348 2.4622 35 1 1.9251 -4.6559 1.5769 36 1 1.6640 -4.4639 4.6118 37 1 1.6344 -5.9680 3.6607 38 1 3.5026 -5.6546 1.7144 39 1 7.9698 -7.0744 4.1370 40 1 8.7319 -9.1359 2.2554 41 1 9.7321 -6.6011 1.2535 42 1 9.5455 -9.4781 -0.6198 43 1 7.1385 -9.5448 -0.2742 44 1 3.7447 -3.0840 4.7034 45 1 5.1979 -3.6049 3.8178 46 1 4.0059 -3.2760 1.6690 47 1 4.0347 -1.7717 2.6202 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_14048280_15704118.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:50:52 Heat of formation + Delta-G solvation = -77.415580 kcal Electronic energy + Delta-G solvation = -28373.175854 eV Core-core repulsion = 24456.057718 eV Total energy + Delta-G solvation = -3917.118136 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 341.149 amu Computer time = 0.79 seconds Orbital eigenvalues (eV) -42.07476 -40.91334 -39.86375 -38.05338 -37.69962 -35.60714 -34.92322 -32.11673 -31.80804 -30.67265 -28.38567 -28.38319 -26.60467 -25.67088 -24.45734 -23.87430 -22.64596 -21.54240 -20.52744 -19.93753 -19.74745 -18.25961 -17.98334 -17.57537 -17.34430 -16.91724 -16.53166 -16.23207 -16.06436 -15.69371 -15.59475 -15.42288 -15.01518 -14.95678 -14.80124 -14.64852 -14.07449 -13.98875 -13.72399 -13.52018 -13.46685 -13.33851 -13.09640 -12.94540 -12.89581 -12.80093 -12.42563 -12.41060 -12.33006 -12.28469 -12.01564 -11.97687 -11.76841 -11.46440 -11.36288 -11.07542 -10.80343 -10.72303 -10.22337 -10.11362 -8.71057 -5.11407 0.01407 0.07069 0.73076 1.23401 1.28648 1.60482 1.65414 1.92701 2.07696 2.15363 3.37121 3.45706 3.47515 3.51289 3.69791 3.72799 3.75750 3.86035 3.90651 3.93165 3.96939 4.02182 4.18919 4.27347 4.30034 4.49977 4.50847 4.53437 4.55891 4.63388 4.71801 4.73437 4.77906 4.83671 4.83713 4.86836 4.90643 4.93642 5.02841 5.04060 5.11339 5.17098 5.22115 5.25223 5.27481 5.58673 5.87711 6.06552 6.54193 6.85030 7.04230 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.184 4.184 2 C 0.117 3.883 3 C -0.142 4.142 4 C -0.183 4.183 5 O -0.349 6.349 6 C 0.468 3.532 7 O -0.502 6.502 8 C -0.082 4.082 9 H 0.111 0.889 10 C -0.105 4.105 11 C -0.128 4.128 12 C 0.158 3.842 13 H 0.095 0.905 14 N -0.686 5.686 15 C 0.329 3.671 16 N -0.550 5.550 17 C 0.120 3.880 18 C -0.308 4.308 19 C -0.009 4.009 20 O -0.537 6.537 21 Si 0.654 3.346 22 S 0.082 5.918 23 C -0.129 4.129 24 C -0.108 4.108 25 H 0.061 0.939 26 H 0.072 0.928 27 H 0.083 0.917 28 H 0.067 0.933 29 H 0.079 0.921 30 H 0.067 0.933 31 H 0.082 0.918 32 H 0.072 0.928 33 H 0.061 0.939 34 H 0.079 0.921 35 H 0.069 0.931 36 H 0.086 0.914 37 H 0.078 0.922 38 H 0.412 0.588 39 H 0.175 0.825 40 H 0.121 0.879 41 H 0.380 0.620 42 H -0.236 1.236 43 H -0.241 1.241 44 H 0.078 0.922 45 H 0.077 0.923 46 H 0.067 0.933 47 H 0.078 0.922 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.399 3.255 -0.790 3.630 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.241 4.241 2 C 0.081 3.919 3 C -0.199 4.199 4 C -0.240 4.240 5 O -0.266 6.266 6 C 0.311 3.689 7 O -0.390 6.390 8 C -0.101 4.101 9 H 0.129 0.871 10 C -0.143 4.143 11 C -0.166 4.166 12 C 0.052 3.948 13 H 0.113 0.887 14 N -0.327 5.327 15 C -0.041 4.041 16 N -0.275 5.275 17 C -0.031 4.031 18 C -0.431 4.431 19 C -0.124 4.124 20 O -0.342 6.342 21 Si 0.554 3.446 22 S 0.331 5.669 23 C -0.168 4.168 24 C -0.146 4.146 25 H 0.080 0.920 26 H 0.091 0.909 27 H 0.101 0.899 28 H 0.086 0.914 29 H 0.098 0.902 30 H 0.086 0.914 31 H 0.101 0.899 32 H 0.091 0.909 33 H 0.081 0.919 34 H 0.098 0.902 35 H 0.087 0.913 36 H 0.105 0.895 37 H 0.097 0.903 38 H 0.251 0.749 39 H 0.192 0.808 40 H 0.138 0.862 41 H 0.227 0.773 42 H -0.159 1.159 43 H -0.165 1.165 44 H 0.096 0.904 45 H 0.096 0.904 46 H 0.085 0.915 47 H 0.097 0.903 Dipole moment (debyes) X Y Z Total from point charges -2.037 2.109 -1.636 3.358 hybrid contribution 0.162 -0.039 0.794 0.811 sum -1.876 2.070 -0.842 2.918 Atomic orbital electron populations 1.22496 0.93920 1.04694 1.02961 1.22220 0.94438 0.92365 0.82895 1.21868 1.02324 0.92463 1.03265 1.22491 1.01728 1.03065 0.96747 1.86554 1.69654 1.25225 1.45194 1.23624 0.77139 0.80710 0.87465 1.90593 1.35124 1.69999 1.43274 1.21175 0.98269 0.95580 0.95091 0.87141 1.21435 1.01787 0.92432 0.98606 1.21891 0.94072 1.01546 0.99132 1.21050 0.93148 0.93129 0.87511 0.88682 1.44278 1.14584 1.58320 1.15510 1.23743 0.91876 0.95319 0.93194 1.66494 1.05366 1.26805 1.28857 1.21318 0.92847 0.93351 0.95570 1.25546 1.02305 1.17122 0.98126 1.24093 0.82417 0.95014 1.10843 1.86512 1.37095 1.36833 1.73805 0.94977 0.82336 0.88703 0.78549 1.84029 1.13818 1.53509 1.15563 1.21950 1.02102 0.94720 0.97998 1.21476 0.91686 1.01829 0.99598 0.91959 0.90869 0.89862 0.91378 0.90186 0.91393 0.89879 0.90878 0.91944 0.90213 0.91274 0.89510 0.90305 0.74903 0.80784 0.86196 0.77292 1.15940 1.16539 0.90355 0.90412 0.91467 0.90304 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.10 8.37 37.16 0.31 0.21 16 2 C 0.12 0.06 1.13 -90.62 -0.10 -0.04 16 3 C -0.14 0.15 8.85 37.15 0.33 0.48 16 4 C -0.18 -0.08 8.37 37.15 0.31 0.23 16 5 O -0.35 -0.44 9.80 -39.26 -0.38 -0.83 16 6 C 0.47 0.45 6.56 36.00 0.24 0.69 16 7 O -0.50 -1.48 11.48 -18.76 -0.22 -1.70 16 8 C -0.08 0.14 2.63 -91.77 -0.24 -0.10 16 9 H 0.11 -0.31 8.14 -51.93 -0.42 -0.73 16 10 C -0.10 0.23 4.32 -26.73 -0.12 0.12 16 11 C -0.13 0.40 5.61 -26.73 -0.15 0.25 16 12 C 0.16 -0.28 2.91 -67.93 -0.20 -0.48 16 13 H 0.10 -0.03 7.77 -51.92 -0.40 -0.44 16 14 N -0.69 0.76 4.38 -55.78 -0.24 0.52 16 15 C 0.33 0.30 8.06 -87.68 -0.71 -0.40 16 16 N -0.55 -1.32 9.90 -15.21 -0.15 -1.47 16 17 C 0.12 0.21 11.22 -19.14 -0.21 -0.01 16 18 C -0.31 -0.24 5.74 -36.03 -0.21 -0.44 16 19 C -0.01 0.00 2.99 36.01 0.11 0.11 16 20 O -0.54 -0.16 12.87 -35.23 -0.45 -0.62 16 21 Si 0.65 -0.27 31.05 -169.99 -5.28 -5.55 16 22 S 0.08 0.01 20.57 -107.50 -2.21 -2.20 16 23 C -0.13 0.25 5.62 -26.75 -0.15 0.10 16 24 C -0.11 0.20 4.98 -26.75 -0.13 0.06 16 25 H 0.06 0.02 8.14 -51.93 -0.42 -0.40 16 26 H 0.07 -0.04 8.14 -51.93 -0.42 -0.46 16 27 H 0.08 0.19 5.89 -51.93 -0.31 -0.12 16 28 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 29 H 0.08 -0.18 8.14 -51.93 -0.42 -0.60 16 30 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 31 H 0.08 0.18 5.89 -51.93 -0.31 -0.13 16 32 H 0.07 -0.05 8.14 -51.93 -0.42 -0.47 16 33 H 0.06 0.01 8.14 -51.93 -0.42 -0.41 16 34 H 0.08 -0.12 8.10 -51.93 -0.42 -0.54 16 35 H 0.07 -0.12 6.46 -51.93 -0.34 -0.46 16 36 H 0.09 -0.34 8.14 -51.92 -0.42 -0.76 16 37 H 0.08 -0.23 8.14 -51.93 -0.42 -0.66 16 38 H 0.41 -0.91 6.99 -40.82 -0.29 -1.20 16 39 H 0.18 0.13 8.06 -52.49 -0.42 -0.30 16 40 H 0.12 0.02 7.96 -51.93 -0.41 -0.39 16 41 H 0.38 -1.23 8.70 45.56 0.40 -0.84 16 42 H -0.24 -0.52 7.11 56.52 0.40 -0.12 16 43 H -0.24 -0.45 7.11 56.52 0.40 -0.05 16 44 H 0.08 -0.22 8.14 -51.93 -0.42 -0.64 16 45 H 0.08 -0.01 8.14 -51.93 -0.42 -0.43 16 46 H 0.07 -0.07 7.60 -51.92 -0.39 -0.46 16 47 H 0.08 -0.11 8.12 -51.93 -0.42 -0.53 16 LS Contribution 380.87 15.07 5.74 5.74 Total: 0.00 -5.77 380.87 -11.71 -17.48 By element: Atomic # 1 Polarization: -4.55 SS G_CDS: -7.58 Total: -12.13 kcal Atomic # 6 Polarization: 1.69 SS G_CDS: -0.92 Total: 0.76 kcal Atomic # 7 Polarization: -0.56 SS G_CDS: -0.40 Total: -0.96 kcal Atomic # 8 Polarization: -2.09 SS G_CDS: -1.05 Total: -3.15 kcal Atomic # 14 Polarization: -0.27 SS G_CDS: -5.28 Total: -5.55 kcal Atomic # 16 Polarization: 0.01 SS G_CDS: -2.21 Total: -2.20 kcal Total LS contribution 5.74 Total: 5.74 kcal Total: -5.77 -11.71 -17.48 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_14048280_15704118.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -59.939 kcal (2) G-P(sol) polarization free energy of solvation -5.770 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -65.710 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.706 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.476 kcal (6) G-S(sol) free energy of system = (1) + (5) -77.416 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.79 seconds