Wall clock time and date at job start Mon Mar 8 2021 04:50:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52995 * 1 3 3 C 1.53001 * 109.47260 * 2 1 4 4 C 1.53001 * 109.47170 * 240.00253 * 2 1 3 5 5 O 1.45204 * 109.47606 * 119.99865 * 2 1 3 6 6 C 1.34230 * 116.99495 * 60.00061 * 5 2 1 7 7 O 1.20819 * 120.00204 * 359.97438 * 6 5 2 8 8 C 1.50704 * 119.99699 * 180.02562 * 6 5 2 9 9 H 1.09003 * 109.46966 * 59.99802 * 8 6 5 10 10 C 1.53000 * 109.47105 * 180.02562 * 8 6 5 11 11 C 1.52998 * 109.47366 * 180.02562 * 10 8 6 12 12 C 1.53011 * 109.46630 * 299.99982 * 11 10 8 13 13 H 1.08996 * 109.46527 * 180.02562 * 12 11 10 14 14 N 1.46496 * 109.46794 * 299.99599 * 12 11 10 15 15 C 1.39146 * 120.00300 * 205.00191 * 14 12 11 16 16 N 1.32341 * 119.71176 * 0.02562 * 15 14 12 17 17 C 1.32011 * 121.64175 * 179.70717 * 16 15 14 18 18 C 1.37980 * 120.90219 * 0.53716 * 17 16 15 19 19 C 1.50696 * 120.32813 * 179.74867 * 18 17 16 20 20 O 1.42903 * 109.47131 * 119.71716 * 19 18 17 21 21 Si 1.86305 * 109.47185 * 359.72256 * 19 18 17 22 22 C 1.38903 * 119.34469 * 359.47358 * 18 17 16 23 23 C 1.38436 * 118.49024 * 0.25638 * 22 18 17 24 24 F 1.35096 * 120.47665 * 179.97438 * 23 22 18 25 25 C 1.52992 * 109.47408 * 59.99747 * 12 11 10 26 26 C 1.52999 * 109.47037 * 299.99530 * 8 6 5 27 27 H 1.09010 * 109.46804 * 299.99667 * 1 2 3 28 28 H 1.08994 * 109.47819 * 59.99826 * 1 2 3 29 29 H 1.09007 * 109.47059 * 180.02562 * 1 2 3 30 30 H 1.08997 * 109.47180 * 180.02562 * 3 2 1 31 31 H 1.09000 * 109.46718 * 300.00046 * 3 2 1 32 32 H 1.08995 * 109.47135 * 59.99955 * 3 2 1 33 33 H 1.09007 * 109.46613 * 299.99640 * 4 2 1 34 34 H 1.08994 * 109.47308 * 59.99116 * 4 2 1 35 35 H 1.08999 * 109.47598 * 180.02562 * 4 2 1 36 36 H 1.08996 * 109.47169 * 59.99400 * 10 8 6 37 37 H 1.09003 * 109.47001 * 299.99869 * 10 8 6 38 38 H 1.08995 * 109.47425 * 179.97438 * 11 10 8 39 39 H 1.08999 * 109.47215 * 59.98863 * 11 10 8 40 40 H 0.97007 * 120.00319 * 25.00585 * 14 12 11 41 41 H 1.08004 * 119.55000 * 180.26342 * 17 16 15 42 42 H 1.08999 * 109.47358 * 239.72075 * 19 18 17 43 43 H 0.96700 * 114.00311 * 300.00591 * 20 19 18 44 44 H 1.48497 * 110.00233 * 179.97438 * 21 19 18 45 45 H 1.48492 * 109.99800 * 301.31995 * 21 19 18 46 46 H 1.08010 * 120.75708 * 180.23201 * 22 18 17 47 47 H 1.09003 * 109.47138 * 59.99835 * 25 12 11 48 48 H 1.08995 * 109.47253 * 180.02562 * 25 12 11 49 49 H 1.08994 * 109.47515 * 300.00249 * 26 8 6 50 50 H 1.09009 * 109.46868 * 60.00025 * 26 8 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0400 -0.7212 -1.2493 5 8 2.0141 -0.6845 1.1856 6 6 1.6534 -1.9684 1.3378 7 8 0.9560 -2.5025 0.5083 8 6 2.1175 -2.7434 2.5441 9 1 1.7533 -2.2583 3.4498 10 6 1.5711 -4.1708 2.4744 11 6 2.0418 -4.9575 3.6994 12 6 3.5712 -4.9973 3.7231 13 1 3.9064 -5.5582 4.5955 14 7 4.0615 -5.6491 2.5062 15 6 5.3076 -6.2684 2.5024 16 7 6.0448 -6.2656 3.6014 17 6 7.2296 -6.8464 3.6420 18 6 7.7505 -7.4724 2.5282 19 6 9.1068 -8.1264 2.5874 20 8 8.9769 -9.5197 2.2977 21 14 9.8261 -7.9112 4.2925 22 6 7.0098 -7.4989 1.3534 23 6 5.7683 -6.8865 1.3416 24 9 5.0143 -6.8878 0.2206 25 6 4.1175 -3.5700 3.7928 26 6 3.6468 -2.7839 2.5669 27 1 -0.3633 0.5138 0.8901 28 1 -0.3634 0.5138 -0.8899 29 1 -0.3633 -1.0277 0.0005 30 1 3.1300 1.4425 -0.0005 31 1 1.6766 1.9563 -0.8900 32 1 1.6767 1.9563 0.8899 33 1 1.6766 -1.7489 -1.2492 34 1 1.6765 -0.2075 -2.1392 35 1 3.1300 -0.7216 -1.2491 36 1 1.9356 -4.6555 1.5688 37 1 0.4816 -4.1424 2.4579 38 1 1.6521 -5.9742 3.6499 39 1 1.6770 -4.4725 4.6048 40 1 3.5176 -5.6490 1.7030 41 1 7.8010 -6.8274 4.5583 42 1 9.7662 -7.6626 1.8538 43 1 8.4028 -9.9973 2.9119 44 1 11.1636 -8.5524 4.3642 45 1 9.9366 -6.4667 4.6185 46 1 7.3939 -7.9858 0.4691 47 1 3.7526 -3.0850 4.6982 48 1 5.2070 -3.5984 3.8092 49 1 4.0110 -3.2689 1.6613 50 1 4.0365 -1.7670 2.6163 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_14048280_17656566.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:50:57 Heat of formation + Delta-G solvation = -129.177543 kcal Electronic energy + Delta-G solvation = -32679.153161 eV Core-core repulsion = 28201.184236 eV Total energy + Delta-G solvation = -4477.968925 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 353.184 amu Computer time = 0.99 seconds Orbital eigenvalues (eV) -49.83614 -42.06456 -41.43864 -40.03638 -38.12611 -37.73270 -35.70518 -34.95736 -33.21070 -32.28465 -31.92162 -30.33965 -28.37175 -28.36529 -26.53858 -25.71110 -24.65967 -23.81701 -23.02027 -22.44516 -20.66739 -20.38630 -19.49118 -18.42403 -18.27024 -18.09283 -17.58638 -17.48873 -17.04330 -16.96396 -16.42994 -16.07177 -16.00198 -15.90331 -15.47251 -15.38141 -15.30143 -14.92985 -14.70535 -14.46992 -14.33713 -14.12733 -13.93525 -13.69093 -13.57622 -13.48108 -13.31579 -13.26191 -13.03939 -12.92532 -12.87834 -12.61642 -12.40256 -12.37051 -12.26648 -12.08073 -11.99009 -11.75177 -11.43894 -11.34294 -11.14711 -10.77535 -10.68036 -10.62233 -10.44505 -8.73788 -5.09483 -0.04497 0.14706 1.22492 1.26369 1.57132 1.67855 1.92814 1.98534 2.58081 3.07366 3.27084 3.40727 3.41743 3.51815 3.57567 3.59723 3.71869 3.77507 3.85294 3.90446 3.92571 3.96979 4.01296 4.06138 4.23105 4.31371 4.32654 4.41647 4.45063 4.52249 4.57469 4.60881 4.66531 4.73044 4.73337 4.75142 4.85444 4.86652 4.89904 4.94006 4.97859 4.99858 5.05247 5.08380 5.17003 5.19809 5.27122 5.29440 5.41636 5.61080 5.98923 6.19025 6.52462 6.87836 6.97042 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.183 4.183 2 C 0.116 3.884 3 C -0.142 4.142 4 C -0.183 4.183 5 O -0.350 6.350 6 C 0.467 3.533 7 O -0.501 6.501 8 C -0.081 4.081 9 H 0.110 0.890 10 C -0.106 4.106 11 C -0.128 4.128 12 C 0.155 3.845 13 H 0.098 0.902 14 N -0.710 5.710 15 C 0.393 3.607 16 N -0.511 5.511 17 C 0.147 3.853 18 C -0.211 4.211 19 C -0.055 4.055 20 O -0.541 6.541 21 Si 0.686 3.314 22 C -0.038 4.038 23 C -0.022 4.022 24 F -0.134 7.134 25 C -0.128 4.128 26 C -0.109 4.109 27 H 0.061 0.939 28 H 0.072 0.928 29 H 0.083 0.917 30 H 0.067 0.933 31 H 0.079 0.921 32 H 0.067 0.933 33 H 0.083 0.917 34 H 0.072 0.928 35 H 0.061 0.939 36 H 0.069 0.931 37 H 0.078 0.922 38 H 0.078 0.922 39 H 0.085 0.915 40 H 0.411 0.589 41 H 0.162 0.838 42 H 0.115 0.885 43 H 0.380 0.620 44 H -0.252 1.252 45 H -0.254 1.254 46 H 0.148 0.852 47 H 0.078 0.922 48 H 0.076 0.924 49 H 0.066 0.934 50 H 0.077 0.923 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.579 0.779 4.023 4.139 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.240 4.240 2 C 0.081 3.919 3 C -0.199 4.199 4 C -0.240 4.240 5 O -0.267 6.267 6 C 0.310 3.690 7 O -0.389 6.389 8 C -0.100 4.100 9 H 0.128 0.872 10 C -0.143 4.143 11 C -0.166 4.166 12 C 0.050 3.950 13 H 0.115 0.885 14 N -0.344 5.344 15 C 0.154 3.846 16 N -0.228 5.228 17 C -0.010 4.010 18 C -0.217 4.217 19 C -0.166 4.166 20 O -0.346 6.346 21 Si 0.588 3.412 22 C -0.064 4.064 23 C -0.049 4.049 24 F -0.113 7.113 25 C -0.167 4.167 26 C -0.147 4.147 27 H 0.080 0.920 28 H 0.091 0.909 29 H 0.101 0.899 30 H 0.086 0.914 31 H 0.098 0.902 32 H 0.086 0.914 33 H 0.101 0.899 34 H 0.091 0.909 35 H 0.080 0.920 36 H 0.088 0.912 37 H 0.097 0.903 38 H 0.096 0.904 39 H 0.104 0.896 40 H 0.249 0.751 41 H 0.179 0.821 42 H 0.132 0.868 43 H 0.227 0.773 44 H -0.177 1.177 45 H -0.179 1.179 46 H 0.166 0.834 47 H 0.096 0.904 48 H 0.094 0.906 49 H 0.085 0.915 50 H 0.096 0.904 Dipole moment (debyes) X Y Z Total from point charges -0.169 1.657 4.608 4.899 hybrid contribution -0.199 -0.040 -2.154 2.163 sum -0.368 1.617 2.454 2.962 Atomic orbital electron populations 1.22493 0.93894 1.04709 1.02944 1.22218 0.94457 0.92348 0.82906 1.21865 1.02290 0.92479 1.03255 1.22491 1.01696 1.03098 0.96759 1.86552 1.69674 1.25279 1.45191 1.23639 0.77192 0.80690 0.87477 1.90591 1.35145 1.69984 1.43180 1.21170 0.98197 0.95577 0.95075 0.87166 1.21438 1.01729 0.92380 0.98781 1.21882 0.94276 1.01463 0.98994 1.20985 0.93078 0.93104 0.87828 0.88452 1.44795 1.15541 1.58622 1.15477 1.18442 0.87719 0.90136 0.88304 1.67307 1.07409 1.22905 1.25160 1.22334 0.90380 0.91187 0.97082 1.20912 0.99781 1.06416 0.94580 1.24855 0.95732 0.83764 1.12283 1.86511 1.71828 1.18298 1.57963 0.94832 0.83596 0.82899 0.79880 1.21267 0.91136 0.94711 0.99267 1.18024 0.93520 1.09471 0.83855 1.91495 1.75155 1.95389 1.49264 1.21963 1.01938 0.94914 0.97888 1.21500 0.91761 1.01749 0.99692 0.91951 0.90874 0.89851 0.91427 0.90193 0.91379 0.89868 0.90875 0.92010 0.91232 0.90289 0.90357 0.89629 0.75071 0.82103 0.86787 0.77298 1.17666 1.17873 0.83401 0.90380 0.90571 0.91531 0.90427 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.20 8.37 37.16 0.31 0.11 16 2 C 0.12 0.14 1.13 -90.62 -0.10 0.04 16 3 C -0.14 0.08 8.85 37.16 0.33 0.40 16 4 C -0.18 -0.24 8.37 37.16 0.31 0.07 16 5 O -0.35 -0.70 9.79 -39.26 -0.38 -1.08 16 6 C 0.47 0.84 6.57 36.01 0.24 1.08 16 7 O -0.50 -1.94 11.48 -18.74 -0.22 -2.15 16 8 C -0.08 0.08 2.63 -91.77 -0.24 -0.16 16 9 H 0.11 -0.25 8.14 -51.93 -0.42 -0.67 16 10 C -0.11 0.14 4.32 -26.73 -0.12 0.03 16 11 C -0.13 0.35 5.61 -26.73 -0.15 0.20 16 12 C 0.15 -0.26 2.80 -67.93 -0.19 -0.45 16 13 H 0.10 -0.10 7.54 -51.93 -0.39 -0.49 16 14 N -0.71 0.22 4.38 -53.85 -0.24 -0.02 16 15 C 0.39 0.46 7.47 -154.85 -1.16 -0.70 16 16 N -0.51 -0.47 9.20 -12.36 -0.11 -0.58 16 17 C 0.15 -0.07 9.84 -17.57 -0.17 -0.24 16 18 C -0.21 0.09 5.40 -104.47 -0.56 -0.48 16 19 C -0.05 0.06 2.84 36.00 0.10 0.16 16 20 O -0.54 0.29 12.78 -35.23 -0.45 -0.16 16 21 Si 0.69 -1.44 29.82 -169.99 -5.07 -6.51 16 22 C -0.04 -0.03 9.75 -39.26 -0.38 -0.41 16 23 C -0.02 -0.04 7.35 -39.10 -0.29 -0.33 16 24 F -0.13 -0.36 16.65 2.25 0.04 -0.32 16 25 C -0.13 0.22 5.62 -26.71 -0.15 0.07 16 26 C -0.11 0.11 4.98 -26.71 -0.13 -0.02 16 27 H 0.06 0.05 8.14 -51.92 -0.42 -0.38 16 28 H 0.07 0.00 8.14 -51.93 -0.42 -0.43 16 29 H 0.08 0.24 5.89 -51.93 -0.31 -0.07 16 30 H 0.07 -0.04 8.14 -51.93 -0.42 -0.46 16 31 H 0.08 -0.14 8.14 -51.93 -0.42 -0.56 16 32 H 0.07 -0.05 8.14 -51.93 -0.42 -0.47 16 33 H 0.08 0.26 5.89 -51.93 -0.31 -0.05 16 34 H 0.07 0.01 8.14 -51.93 -0.42 -0.41 16 35 H 0.06 0.07 8.14 -51.93 -0.42 -0.35 16 36 H 0.07 -0.03 6.47 -51.93 -0.34 -0.36 16 37 H 0.08 -0.06 8.10 -51.93 -0.42 -0.48 16 38 H 0.08 -0.20 8.14 -51.93 -0.42 -0.62 16 39 H 0.09 -0.32 8.14 -51.93 -0.42 -0.74 16 40 H 0.41 -0.15 6.34 -40.82 -0.26 -0.41 16 41 H 0.16 -0.44 4.88 -52.48 -0.26 -0.70 16 42 H 0.11 -0.08 7.96 -51.93 -0.41 -0.50 16 43 H 0.38 -1.65 8.70 45.56 0.40 -1.25 16 44 H -0.25 -0.33 7.11 56.52 0.40 0.07 16 45 H -0.25 -0.01 7.11 56.52 0.40 0.39 16 46 H 0.15 0.01 8.06 -52.48 -0.42 -0.41 16 47 H 0.08 -0.22 8.14 -51.93 -0.42 -0.64 16 48 H 0.08 -0.02 8.14 -51.93 -0.42 -0.44 16 49 H 0.07 0.02 7.60 -51.93 -0.39 -0.37 16 50 H 0.08 -0.05 8.11 -51.92 -0.42 -0.48 16 LS Contribution 393.43 15.07 5.93 5.93 Total: 0.00 -6.13 393.43 -10.66 -16.79 By element: Atomic # 1 Polarization: -3.48 SS G_CDS: -7.80 Total: -11.28 kcal Atomic # 6 Polarization: 1.73 SS G_CDS: -2.36 Total: -0.63 kcal Atomic # 7 Polarization: -0.25 SS G_CDS: -0.35 Total: -0.60 kcal Atomic # 8 Polarization: -2.34 SS G_CDS: -1.05 Total: -3.39 kcal Atomic # 9 Polarization: -0.36 SS G_CDS: 0.04 Total: -0.32 kcal Atomic # 14 Polarization: -1.44 SS G_CDS: -5.07 Total: -6.51 kcal Total LS contribution 5.93 Total: 5.93 kcal Total: -6.13 -10.66 -16.79 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_14048280_17656566.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -112.387 kcal (2) G-P(sol) polarization free energy of solvation -6.132 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -118.519 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.658 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.791 kcal (6) G-S(sol) free energy of system = (1) + (5) -129.178 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.99 seconds