Wall clock time and date at job start Mon Mar 8 2021 05:24:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53008 * 1 3 3 C 1.52998 * 109.47176 * 2 1 4 4 C 1.53002 * 109.46903 * 239.99942 * 2 1 3 5 5 Si 1.86302 * 109.47131 * 119.99957 * 2 1 3 6 6 C 1.86296 * 109.47051 * 300.00166 * 5 2 1 7 7 C 1.86292 * 109.47008 * 179.97438 * 5 2 1 8 8 O 1.63098 * 109.46908 * 59.99789 * 5 2 1 9 9 C 1.42903 * 113.99860 * 179.97438 * 8 5 2 10 10 C 1.53002 * 109.47040 * 180.02562 * 9 8 5 11 11 C 1.53517 * 114.16814 * 184.99747 * 10 9 8 12 12 N 1.47480 * 87.93111 * 220.32801 * 11 10 9 13 13 C 1.39008 * 110.99982 * 138.70515 * 12 11 10 14 14 C 1.39094 * 119.70646 * 180.02562 * 13 12 11 15 15 C 1.38338 * 119.09590 * 179.72553 * 14 13 12 16 16 C 1.38841 * 118.50666 * 0.51579 * 15 14 13 17 17 C 1.50706 * 120.33392 * 179.73537 * 16 15 14 18 18 O 1.42895 * 109.47147 * 64.72539 * 17 16 15 19 19 Si 1.86299 * 109.46748 * 184.72181 * 17 16 15 20 20 H 1.48503 * 109.47188 * 60.00070 * 19 17 16 21 21 H 1.48506 * 109.47139 * 179.97438 * 19 17 16 22 22 H 1.48505 * 109.47505 * 299.99883 * 19 17 16 23 23 C 1.38058 * 119.32775 * 359.45858 * 16 15 14 24 24 N 1.31946 * 120.85683 * 0.30030 * 23 16 15 25 25 C 1.47485 * 87.83750 * 27.01112 * 12 11 10 26 26 H 1.09003 * 109.46902 * 299.99978 * 1 2 3 27 27 H 1.08999 * 109.46760 * 59.99992 * 1 2 3 28 28 H 1.09002 * 109.46751 * 180.02562 * 1 2 3 29 29 H 1.08998 * 109.47332 * 180.02562 * 3 2 1 30 30 H 1.09002 * 109.46901 * 300.00345 * 3 2 1 31 31 H 1.09005 * 109.47263 * 59.99660 * 3 2 1 32 32 H 1.09000 * 109.47219 * 300.00062 * 4 2 1 33 33 H 1.09007 * 109.47087 * 60.00235 * 4 2 1 34 34 H 1.09006 * 109.46628 * 179.97438 * 4 2 1 35 35 H 1.08994 * 109.47121 * 180.02562 * 6 5 2 36 36 H 1.09000 * 109.46997 * 299.99769 * 6 5 2 37 37 H 1.09006 * 109.47535 * 59.99947 * 6 5 2 38 38 H 1.08996 * 109.47712 * 299.99844 * 7 5 2 39 39 H 1.09000 * 109.47135 * 60.00173 * 7 5 2 40 40 H 1.09002 * 109.47364 * 180.02562 * 7 5 2 41 41 H 1.08992 * 109.47250 * 60.00249 * 9 8 5 42 42 H 1.09007 * 109.46926 * 299.99902 * 9 8 5 43 43 H 1.08997 * 113.38249 * 318.08048 * 10 9 8 44 44 H 1.08997 * 113.47023 * 105.56458 * 11 10 9 45 45 H 1.08990 * 113.53107 * 335.10436 * 11 10 9 46 46 H 1.08000 * 120.45048 * 359.97438 * 14 13 12 47 47 H 1.07999 * 120.74847 * 180.24619 * 15 14 13 48 48 H 1.09000 * 109.47318 * 304.71652 * 17 16 15 49 49 H 0.96695 * 114.00385 * 59.99326 * 18 17 16 50 50 H 1.07997 * 119.57643 * 180.27459 * 23 16 15 51 51 H 1.09008 * 113.47246 * 87.75536 * 25 12 11 52 52 H 1.08993 * 113.47684 * 218.21732 * 25 12 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 6 2.0401 1.4425 0.0000 4 6 2.0400 -0.7213 -1.2493 5 14 2.1511 -0.8782 1.5212 6 6 1.5301 0.0000 3.0422 7 6 4.0140 -0.8789 1.5207 8 8 1.6074 -2.4159 1.5211 9 6 2.0295 -3.1817 2.6514 10 6 1.4645 -4.5997 2.5465 11 6 1.7522 -5.4829 3.7688 12 7 2.0057 -6.5975 2.8369 13 6 3.1074 -7.3431 3.2401 14 6 3.5089 -8.4418 2.4876 15 6 4.6105 -9.1715 2.8973 16 6 5.2691 -8.7828 4.0560 17 6 6.4701 -9.5519 4.5433 18 8 7.5307 -9.4310 3.5933 19 14 7.0243 -8.8639 6.1835 20 1 5.9221 -8.9894 7.1708 21 1 8.2074 -9.6220 6.6641 22 1 7.3848 -7.4322 6.0236 23 6 4.8162 -7.6813 4.7542 24 7 3.7655 -7.0008 4.3371 25 6 2.3883 -5.5927 1.8274 26 1 -0.3633 0.5138 0.8900 27 1 -0.3633 0.5138 -0.8900 28 1 -0.3633 -1.0277 0.0005 29 1 3.1301 1.4425 -0.0005 30 1 1.6767 1.9563 -0.8900 31 1 1.6767 1.9564 0.8900 32 1 1.6767 -1.7489 -1.2493 33 1 1.6767 -0.2074 -2.1393 34 1 3.1301 -0.7209 -1.2495 35 1 1.8937 -0.5135 3.9322 36 1 1.8934 1.0276 3.0422 37 1 0.4400 0.0000 3.0423 38 1 4.3770 -1.3930 0.6308 39 1 4.3777 0.1486 1.5205 40 1 4.3774 -1.3931 2.4105 41 1 1.6654 -2.7119 3.5650 42 1 3.1184 -3.2255 2.6744 43 1 0.4287 -4.6287 2.2086 44 1 0.8817 -5.6391 4.4060 45 1 2.6351 -5.1761 4.3293 46 1 2.9705 -8.7190 1.5933 47 1 4.9478 -10.0270 2.3310 48 1 6.2055 -10.6027 4.6609 49 1 7.8182 -8.5208 3.4384 50 1 5.3282 -7.3727 5.6536 51 1 3.4415 -5.3146 1.8691 52 1 2.0572 -5.8421 0.8193 RHF calculation, no. of doubly occupied orbitals= 62 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_14186586_13915762.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 05:24:04 Heat of formation + Delta-G solvation = -48.470503 kcal Electronic energy + Delta-G solvation = -27653.428167 eV Core-core repulsion = 23970.652167 eV Total energy + Delta-G solvation = -3682.776000 eV No. of doubly occupied orbitals = 62 Molecular weight (most abundant/longest-lived isotopes) = 338.194 amu Computer time = 0.95 seconds Orbital eigenvalues (eV) -42.43354 -40.45789 -38.05510 -37.52591 -36.85310 -33.71576 -33.27847 -30.54953 -29.43801 -29.11828 -27.88460 -27.40961 -27.27916 -27.01563 -25.32506 -24.28389 -22.46577 -20.78895 -20.44448 -18.83477 -18.33728 -17.78388 -17.70819 -16.79925 -16.64547 -16.44471 -16.10092 -16.06202 -15.77022 -15.07892 -14.93694 -14.88296 -14.82087 -14.69029 -14.39994 -14.20667 -14.00655 -13.68377 -13.58112 -13.45353 -13.34562 -13.25456 -12.96145 -12.95247 -12.72643 -12.56166 -12.45384 -12.36658 -12.27025 -12.03394 -12.01745 -11.72054 -11.69312 -11.36539 -11.33427 -10.98475 -10.91000 -10.54627 -10.44674 -10.37443 -10.09190 -9.50336 -0.11937 0.18594 1.03301 1.32947 1.40652 1.41664 1.72457 1.82377 2.02622 2.39303 2.45345 2.72386 3.13453 3.34043 3.40161 3.58752 3.69315 3.82775 3.93099 4.06143 4.10012 4.10241 4.22170 4.26348 4.31409 4.43667 4.44565 4.46195 4.49921 4.63265 4.65177 4.65410 4.67585 4.69789 4.70735 4.77370 4.78871 4.79212 4.83689 4.97969 5.01384 5.08561 5.08714 5.10940 5.14973 5.18973 5.31984 5.39646 5.41107 5.44349 5.49755 5.53296 5.57142 6.08139 6.41576 6.79067 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.134 4.134 2 C -0.375 4.375 3 C -0.137 4.137 4 C -0.134 4.134 5 Si 1.287 2.713 6 C -0.512 4.512 7 C -0.512 4.512 8 O -0.622 6.622 9 C 0.096 3.904 10 C -0.114 4.114 11 C 0.012 3.988 12 N -0.429 5.429 13 C 0.276 3.724 14 C -0.160 4.160 15 C -0.031 4.031 16 C -0.189 4.189 17 C -0.073 4.073 18 O -0.537 6.537 19 Si 0.942 3.058 20 H -0.247 1.247 21 H -0.249 1.249 22 H -0.249 1.249 23 C 0.116 3.884 24 N -0.508 5.508 25 C 0.019 3.981 26 H 0.054 0.946 27 H 0.053 0.947 28 H 0.060 0.940 29 H 0.055 0.945 30 H 0.056 0.944 31 H 0.056 0.944 32 H 0.060 0.940 33 H 0.053 0.947 34 H 0.053 0.947 35 H 0.066 0.934 36 H 0.073 0.927 37 H 0.073 0.927 38 H 0.072 0.928 39 H 0.074 0.926 40 H 0.065 0.935 41 H 0.063 0.937 42 H 0.056 0.944 43 H 0.118 0.882 44 H 0.092 0.908 45 H 0.102 0.898 46 H 0.142 0.858 47 H 0.143 0.857 48 H 0.121 0.879 49 H 0.377 0.623 50 H 0.152 0.848 51 H 0.075 0.925 52 H 0.098 0.902 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.212 0.925 0.206 1.538 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.191 4.191 2 C -0.418 4.418 3 C -0.194 4.194 4 C -0.191 4.191 5 Si 1.418 2.582 6 C -0.613 4.613 7 C -0.613 4.613 8 O -0.581 6.581 9 C 0.020 3.980 10 C -0.133 4.133 11 C -0.116 4.116 12 N -0.148 5.148 13 C 0.046 3.954 14 C -0.181 4.181 15 C -0.057 4.057 16 C -0.192 4.192 17 C -0.184 4.184 18 O -0.342 6.342 19 Si 0.765 3.235 20 H -0.171 1.171 21 H -0.172 1.172 22 H -0.173 1.173 23 C -0.042 4.042 24 N -0.220 5.220 25 C -0.107 4.107 26 H 0.073 0.927 27 H 0.072 0.928 28 H 0.079 0.921 29 H 0.074 0.926 30 H 0.075 0.925 31 H 0.075 0.925 32 H 0.079 0.921 33 H 0.072 0.928 34 H 0.072 0.928 35 H 0.085 0.915 36 H 0.092 0.908 37 H 0.092 0.908 38 H 0.091 0.909 39 H 0.093 0.907 40 H 0.084 0.916 41 H 0.081 0.919 42 H 0.074 0.926 43 H 0.136 0.864 44 H 0.111 0.889 45 H 0.120 0.880 46 H 0.160 0.840 47 H 0.161 0.839 48 H 0.138 0.862 49 H 0.224 0.776 50 H 0.168 0.832 51 H 0.094 0.906 52 H 0.116 0.884 Dipole moment (debyes) X Y Z Total from point charges 0.453 0.630 1.165 1.400 hybrid contribution 0.958 0.523 -0.529 1.213 sum 1.411 1.153 0.637 1.930 Atomic orbital electron populations 1.21512 0.93779 1.02043 1.01771 1.25783 1.00711 1.02595 1.12721 1.21558 1.00745 0.94956 1.02146 1.21511 1.00548 1.00271 0.96761 0.76710 0.62934 0.53599 0.64960 1.27040 1.07053 1.09465 1.17791 1.27047 1.25226 1.04700 1.04372 1.85365 1.79181 1.45919 1.47651 1.21970 0.97690 0.91104 0.87190 1.22894 1.01639 0.92024 0.96774 1.23864 1.03598 0.88576 0.95597 1.66624 1.24896 1.14345 1.08889 1.20529 0.90213 0.93869 0.90829 1.21708 0.98387 0.95810 1.02204 1.21421 0.92238 0.98027 0.94018 1.21261 1.00572 0.99083 0.98292 1.24859 0.86121 1.04849 1.02583 1.86532 1.51848 1.32618 1.63185 0.85775 0.81569 0.80349 0.75838 1.17067 1.17238 1.17270 1.22423 0.92291 0.91213 0.98271 1.67569 1.07951 1.30893 1.15592 1.23952 0.99297 0.89751 0.97706 0.92717 0.92820 0.92101 0.92557 0.92510 0.92522 0.92115 0.92820 0.92768 0.91477 0.90767 0.90815 0.90924 0.90732 0.91576 0.91934 0.92573 0.86352 0.88922 0.87978 0.83991 0.83881 0.86161 0.77631 0.83156 0.90648 0.88387 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.13 0.02 7.85 37.16 0.29 0.31 16 2 C -0.37 0.18 0.53 -90.61 -0.05 0.13 16 3 C -0.14 0.10 7.85 37.16 0.29 0.39 16 4 C -0.13 0.02 7.85 37.16 0.29 0.31 16 5 Si 1.29 -1.66 8.45 -169.99 -1.44 -3.10 16 6 C -0.51 0.43 8.50 101.05 0.86 1.29 16 7 C -0.51 0.43 8.50 101.05 0.86 1.29 16 8 O -0.62 0.13 8.56 -35.23 -0.30 -0.17 16 9 C 0.10 -0.11 5.04 37.16 0.19 0.08 16 10 C -0.11 0.07 4.35 -90.08 -0.39 -0.32 16 11 C 0.01 0.00 6.96 -7.53 -0.05 -0.05 16 12 N -0.43 -0.61 6.41 -182.65 -1.17 -1.78 16 13 C 0.28 0.56 5.85 -155.01 -0.91 -0.35 16 14 C -0.16 -0.13 10.00 -39.23 -0.39 -0.52 16 15 C -0.03 0.00 9.83 -39.32 -0.39 -0.39 16 16 C -0.19 0.01 5.36 -104.46 -0.56 -0.55 16 17 C -0.07 0.10 2.82 36.01 0.10 0.20 16 18 O -0.54 0.36 12.84 -35.23 -0.45 -0.09 16 19 Si 0.94 -1.30 25.16 -169.99 -4.28 -5.58 16 20 H -0.25 0.14 7.11 56.52 0.40 0.54 16 21 H -0.25 -0.02 7.11 56.52 0.40 0.38 16 22 H -0.25 0.34 7.05 56.52 0.40 0.73 16 23 C 0.12 0.10 9.84 -17.57 -0.17 -0.07 16 24 N -0.51 -1.19 8.20 -12.44 -0.10 -1.29 16 25 C 0.02 0.00 7.22 -7.53 -0.05 -0.06 16 26 H 0.05 -0.04 7.79 -51.93 -0.40 -0.44 16 27 H 0.05 0.01 8.14 -51.93 -0.42 -0.41 16 28 H 0.06 0.00 7.96 -51.93 -0.41 -0.41 16 29 H 0.06 -0.07 7.79 -51.93 -0.40 -0.48 16 30 H 0.06 -0.02 8.14 -51.93 -0.42 -0.44 16 31 H 0.06 -0.07 7.79 -51.93 -0.40 -0.48 16 32 H 0.06 0.00 7.97 -51.93 -0.41 -0.41 16 33 H 0.05 0.01 8.14 -51.93 -0.42 -0.41 16 34 H 0.05 -0.04 7.79 -51.93 -0.40 -0.44 16 35 H 0.07 -0.08 7.48 -51.93 -0.39 -0.46 16 36 H 0.07 -0.08 7.79 -51.93 -0.40 -0.48 16 37 H 0.07 -0.04 7.79 -51.93 -0.40 -0.45 16 38 H 0.07 -0.04 7.79 -51.93 -0.40 -0.45 16 39 H 0.07 -0.08 7.79 -51.93 -0.40 -0.48 16 40 H 0.07 -0.07 7.48 -51.93 -0.39 -0.46 16 41 H 0.06 -0.14 7.21 -51.93 -0.37 -0.51 16 42 H 0.06 -0.10 6.87 -51.93 -0.36 -0.46 16 43 H 0.12 -0.05 8.14 -51.93 -0.42 -0.47 16 44 H 0.09 0.01 8.14 -51.93 -0.42 -0.42 16 45 H 0.10 0.05 6.62 -51.93 -0.34 -0.29 16 46 H 0.14 -0.07 8.06 -52.49 -0.42 -0.49 16 47 H 0.14 -0.22 8.06 -52.49 -0.42 -0.64 16 48 H 0.12 -0.26 7.96 -51.93 -0.41 -0.67 16 49 H 0.38 -1.41 8.70 45.56 0.40 -1.01 16 50 H 0.15 -0.10 4.87 -52.49 -0.26 -0.36 16 51 H 0.08 -0.01 7.62 -51.92 -0.40 -0.41 16 52 H 0.10 -0.07 8.14 -51.93 -0.42 -0.49 16 LS Contribution 407.27 15.07 6.14 6.14 Total: 0.00 -4.98 407.27 -10.45 -15.44 By element: Atomic # 1 Polarization: -2.51 SS G_CDS: -8.77 Total: -11.28 kcal Atomic # 6 Polarization: 1.79 SS G_CDS: -0.08 Total: 1.71 kcal Atomic # 7 Polarization: -1.79 SS G_CDS: -1.27 Total: -3.07 kcal Atomic # 8 Polarization: 0.49 SS G_CDS: -0.75 Total: -0.26 kcal Atomic # 14 Polarization: -2.96 SS G_CDS: -5.71 Total: -8.68 kcal Total LS contribution 6.14 Total: 6.14 kcal Total: -4.98 -10.45 -15.44 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_14186586_13915762.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -33.032 kcal (2) G-P(sol) polarization free energy of solvation -4.984 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -38.016 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.455 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.439 kcal (6) G-S(sol) free energy of system = (1) + (5) -48.471 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.96 seconds