Wall clock time and date at job start Mon Mar 8 2021 05:24:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50709 * 1 3 3 C 1.33322 * 125.95416 * 2 1 4 4 C 1.50703 * 122.70961 * 0.02711 * 3 2 1 5 5 O 1.42896 * 109.47055 * 329.73414 * 4 3 2 6 6 Si 1.86304 * 109.46911 * 209.73307 * 4 3 2 7 7 H 1.48503 * 109.46928 * 179.97438 * 6 4 3 8 8 H 1.48494 * 109.47278 * 299.99835 * 6 4 3 9 9 H 1.48496 * 109.47072 * 60.00160 * 6 4 3 10 10 N 1.32124 * 114.57741 * 179.75763 * 3 2 1 11 11 C 1.29677 * 116.86758 * 0.24992 * 10 3 2 12 12 N 1.38612 * 124.94933 * 180.02562 * 11 10 3 13 13 C 1.47486 * 111.00078 * 84.02871 * 12 11 10 14 14 C 1.53509 * 87.93268 * 138.70266 * 13 12 11 15 15 C 1.53001 * 114.17001 * 220.32567 * 14 13 12 16 16 O 1.42894 * 109.47359 * 268.84364 * 15 14 13 17 17 Si 1.63094 * 114.00272 * 179.97438 * 16 15 14 18 18 C 1.86305 * 109.47091 * 299.99949 * 17 16 15 19 19 C 1.86301 * 109.47090 * 59.99809 * 17 16 15 20 20 C 1.86302 * 109.47381 * 179.97438 * 17 16 15 21 21 C 1.53001 * 109.46953 * 59.99912 * 20 17 16 22 22 C 1.52997 * 109.47012 * 180.02562 * 20 17 16 23 23 C 1.52998 * 109.46894 * 300.00021 * 20 17 16 24 24 C 1.47482 * 110.99879 * 179.97438 * 12 11 10 25 25 S 1.70974 * 110.10326 * 359.97438 * 11 10 3 26 26 H 1.08999 * 109.47347 * 89.99260 * 1 2 3 27 27 H 1.08995 * 109.46914 * 209.99925 * 1 2 3 28 28 H 1.09011 * 109.46560 * 329.99763 * 1 2 3 29 29 H 1.09002 * 109.47152 * 89.73222 * 4 3 2 30 30 H 0.96703 * 114.00193 * 180.02562 * 5 4 3 31 31 H 1.09003 * 113.47020 * 253.47025 * 13 12 11 32 32 H 1.09006 * 113.47422 * 23.93221 * 13 12 11 33 33 H 1.09001 * 114.34072 * 87.63336 * 14 13 12 34 34 H 1.09006 * 109.46659 * 28.84358 * 15 14 13 35 35 H 1.09001 * 109.46842 * 148.83847 * 15 14 13 36 36 H 1.09000 * 109.47065 * 60.00155 * 18 17 16 37 37 H 1.09003 * 109.47068 * 179.97438 * 18 17 16 38 38 H 1.08996 * 109.47035 * 299.99654 * 18 17 16 39 39 H 1.09002 * 109.46745 * 60.00346 * 19 17 16 40 40 H 1.09003 * 109.47342 * 180.02562 * 19 17 16 41 41 H 1.09000 * 109.47407 * 300.00055 * 19 17 16 42 42 H 1.08995 * 109.47014 * 60.00391 * 21 20 17 43 43 H 1.09008 * 109.46601 * 180.02562 * 21 20 17 44 44 H 1.08992 * 109.47146 * 299.99647 * 21 20 17 45 45 H 1.08996 * 109.47359 * 60.00246 * 22 20 17 46 46 H 1.09000 * 109.46671 * 180.02562 * 22 20 17 47 47 H 1.09002 * 109.47476 * 299.99468 * 22 20 17 48 48 H 1.09003 * 109.47101 * 60.00116 * 23 20 17 49 49 H 1.08999 * 109.46926 * 180.02562 * 23 20 17 50 50 H 1.08996 * 109.47461 * 299.99744 * 23 20 17 51 51 H 1.08995 * 113.47734 * 336.06682 * 24 12 11 52 52 H 1.09003 * 113.47527 * 106.47222 * 24 12 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 6 2.2899 1.0792 0.0000 4 6 1.7416 2.4830 0.0006 5 8 0.4841 2.5034 -0.6779 6 14 2.9360 3.6165 -0.8707 7 1 2.3954 4.9997 -0.8707 8 1 4.2427 3.5953 -0.1656 9 1 3.1216 3.1582 -2.2709 10 7 3.5851 0.8186 0.0051 11 6 3.9315 -0.4311 0.0043 12 7 5.2384 -0.8928 0.0096 13 6 5.7781 -0.9364 1.3815 14 6 6.4240 -2.2826 1.0251 15 6 6.3499 -3.3278 2.1400 16 8 7.5175 -3.2349 2.9584 17 14 7.5523 -4.3051 4.1887 18 6 6.0808 -4.0256 5.2966 19 6 7.4957 -6.0377 3.5063 20 6 9.1203 -4.0749 5.1680 21 6 9.1674 -2.6520 5.7284 22 6 9.1531 -5.0793 6.3216 23 6 10.3284 -4.3048 4.2578 24 6 5.2781 -2.3671 0.0076 25 16 2.5412 -1.4262 -0.0027 26 1 -0.3634 0.0001 -1.0276 27 1 -0.3633 -0.8900 0.5138 28 1 -0.3633 0.8901 0.5139 29 1 1.6053 2.8194 1.0284 30 1 0.0721 3.3775 -0.7164 31 1 6.5023 -0.1485 1.5884 32 1 5.0077 -1.0140 2.1488 33 1 7.4142 -2.2010 0.5767 34 1 5.4640 -3.1471 2.7489 35 1 6.2921 -4.3238 1.7010 36 1 5.1635 -4.1606 4.7234 37 1 6.1037 -4.7412 6.1186 38 1 6.1139 -3.0119 5.6959 39 1 8.3567 -6.2011 2.8581 40 1 7.5184 -6.7530 4.3285 41 1 6.5785 -6.1727 2.9331 42 1 8.3068 -2.4882 6.3768 43 1 10.0851 -2.5173 6.3010 44 1 9.1443 -1.9368 4.9062 45 1 9.1198 -6.0928 5.9221 46 1 10.0704 -4.9443 6.8948 47 1 8.2925 -4.9160 6.9703 48 1 10.3052 -3.5895 3.4356 49 1 11.2458 -4.1706 4.8308 50 1 10.2949 -5.3185 3.8585 51 1 4.3745 -2.8263 0.4083 52 1 5.5775 -2.7921 -0.9505 RHF calculation, no. of doubly occupied orbitals= 63 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_14186586_15704122.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 05:24:37 Heat of formation + Delta-G solvation = -45.936305 kcal Electronic energy + Delta-G solvation = -28241.626788 eV Core-core repulsion = 24492.575307 eV Total energy + Delta-G solvation = -3749.051481 eV No. of doubly occupied orbitals = 63 Molecular weight (most abundant/longest-lived isotopes) = 358.166 amu Computer time = 0.91 seconds Orbital eigenvalues (eV) -42.14625 -40.63933 -37.97835 -37.52058 -36.87499 -33.68720 -31.59799 -29.55874 -29.21917 -29.14719 -27.90383 -27.45787 -27.40642 -26.47133 -25.57747 -23.27063 -21.24762 -20.48117 -19.95336 -19.45833 -18.30927 -17.88531 -17.43531 -17.03308 -16.66456 -16.17361 -16.01324 -15.79461 -15.34446 -15.09088 -14.91033 -14.87114 -14.74698 -14.49094 -14.25609 -14.05091 -13.92433 -13.65388 -13.54596 -13.50138 -13.40240 -13.30899 -13.00484 -12.97455 -12.96974 -12.81691 -12.63459 -12.44083 -12.27979 -12.16493 -11.99901 -11.76777 -11.74504 -11.68146 -11.48258 -11.45028 -11.04101 -10.64399 -10.43266 -10.32865 -10.12218 -10.04408 -9.21880 -0.30909 0.15343 0.62391 1.18463 1.33776 1.60611 1.67970 1.70685 1.76956 1.98510 2.19304 2.22082 2.36485 3.05825 3.09888 3.45447 3.73978 3.92906 3.94870 4.06517 4.07960 4.08778 4.11448 4.19393 4.24409 4.30540 4.33606 4.42480 4.44291 4.51897 4.60331 4.63577 4.65991 4.66938 4.73073 4.77313 4.79060 4.82030 4.91779 4.94757 4.96294 5.03275 5.07012 5.07178 5.15276 5.26718 5.30052 5.34522 5.37572 5.46121 5.48552 5.54293 5.61605 6.50386 6.74415 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.065 4.065 2 C -0.185 4.185 3 C 0.069 3.931 4 C -0.046 4.046 5 O -0.544 6.544 6 Si 0.973 3.027 7 H -0.262 1.262 8 H -0.242 1.242 9 H -0.255 1.255 10 N -0.468 5.468 11 C 0.196 3.804 12 N -0.386 5.386 13 C 0.019 3.981 14 C -0.106 4.106 15 C 0.094 3.906 16 O -0.620 6.620 17 Si 1.287 2.713 18 C -0.512 4.512 19 C -0.512 4.512 20 C -0.374 4.374 21 C -0.134 4.134 22 C -0.137 4.137 23 C -0.134 4.134 24 C -0.001 4.001 25 S 0.089 5.911 26 H 0.079 0.921 27 H 0.060 0.940 28 H 0.092 0.908 29 H 0.084 0.916 30 H 0.385 0.615 31 H 0.105 0.895 32 H 0.081 0.919 33 H 0.127 0.873 34 H 0.058 0.942 35 H 0.065 0.935 36 H 0.065 0.935 37 H 0.074 0.926 38 H 0.072 0.928 39 H 0.073 0.927 40 H 0.074 0.926 41 H 0.066 0.934 42 H 0.054 0.946 43 H 0.053 0.947 44 H 0.060 0.940 45 H 0.056 0.944 46 H 0.056 0.944 47 H 0.056 0.944 48 H 0.060 0.940 49 H 0.053 0.947 50 H 0.054 0.946 51 H 0.084 0.916 52 H 0.111 0.889 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.066 -2.200 2.177 3.721 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.125 4.125 2 C -0.307 4.307 3 C -0.061 4.061 4 C -0.158 4.158 5 O -0.350 6.350 6 Si 0.794 3.206 7 H -0.186 1.186 8 H -0.165 1.165 9 H -0.178 1.178 10 N -0.186 5.186 11 C -0.174 4.174 12 N -0.107 5.107 13 C -0.109 4.109 14 C -0.125 4.125 15 C 0.018 3.982 16 O -0.579 6.579 17 Si 1.418 2.582 18 C -0.614 4.614 19 C -0.613 4.613 20 C -0.418 4.418 21 C -0.191 4.191 22 C -0.194 4.194 23 C -0.191 4.191 24 C -0.130 4.130 25 S 0.342 5.658 26 H 0.098 0.902 27 H 0.079 0.921 28 H 0.110 0.890 29 H 0.102 0.898 30 H 0.233 0.767 31 H 0.124 0.876 32 H 0.099 0.901 33 H 0.145 0.855 34 H 0.076 0.924 35 H 0.083 0.917 36 H 0.084 0.916 37 H 0.093 0.907 38 H 0.091 0.909 39 H 0.092 0.908 40 H 0.093 0.907 41 H 0.085 0.915 42 H 0.073 0.927 43 H 0.072 0.928 44 H 0.079 0.921 45 H 0.075 0.925 46 H 0.075 0.925 47 H 0.075 0.925 48 H 0.079 0.921 49 H 0.072 0.928 50 H 0.073 0.927 51 H 0.102 0.898 52 H 0.129 0.871 Dipole moment (debyes) X Y Z Total from point charges -0.623 -2.332 1.022 2.621 hybrid contribution -1.269 0.312 1.098 1.707 sum -1.892 -2.020 2.120 3.486 Atomic orbital electron populations 1.20247 0.85910 1.02895 1.03398 1.25559 1.01972 0.93219 1.09905 1.19131 0.86655 0.95629 1.04701 1.23965 0.93129 0.97243 1.01469 1.86460 1.33945 1.35717 1.78900 0.85265 0.78913 0.75702 0.80749 1.18648 1.16539 1.17830 1.65867 1.16671 1.17989 1.18092 1.25797 0.95190 0.91831 1.04571 1.65737 1.09353 1.11457 1.24119 1.24095 0.99236 0.99322 0.88254 1.22835 1.00105 0.94368 0.95175 1.21977 0.86301 0.98440 0.91463 1.85363 1.44657 1.73715 1.54203 0.76714 0.65052 0.58402 0.58010 1.27048 1.16825 1.05294 1.12217 1.27038 1.04475 1.22545 1.07283 1.25781 1.13602 0.98468 1.03949 1.21513 1.01811 0.94955 1.00861 1.21557 1.02199 0.98204 0.97456 1.21513 0.97113 1.01461 0.99045 1.24206 0.99035 0.87344 1.02427 1.84067 0.99330 1.11968 1.70483 0.90212 0.92062 0.88984 0.89841 0.76699 0.87645 0.90101 0.85536 0.92363 0.91670 0.91556 0.90669 0.90853 0.90780 0.90697 0.91489 0.92742 0.92791 0.92097 0.92512 0.92485 0.92547 0.92091 0.92799 0.92709 0.89847 0.87093 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.07 -0.02 8.96 36.01 0.32 0.30 16 2 C -0.19 -0.45 6.50 -36.02 -0.23 -0.69 16 3 C 0.07 0.24 5.95 -84.18 -0.50 -0.26 16 4 C -0.05 -0.04 2.81 36.01 0.10 0.06 16 5 O -0.54 0.23 9.88 -35.23 -0.35 -0.12 16 6 Si 0.97 1.92 27.37 -169.99 -4.65 -2.73 16 7 H -0.26 -0.25 7.11 56.52 0.40 0.15 16 8 H -0.24 -0.95 7.11 56.52 0.40 -0.55 16 9 H -0.25 -1.13 7.11 56.52 0.40 -0.73 16 10 N -0.47 -2.29 8.95 -11.36 -0.10 -2.39 16 11 C 0.20 0.63 6.59 -87.69 -0.58 0.06 16 12 N -0.39 -0.73 6.52 -185.01 -1.21 -1.94 16 13 C 0.02 0.00 7.24 -7.60 -0.05 -0.05 16 14 C -0.11 0.17 4.34 -90.11 -0.39 -0.22 16 15 C 0.09 -0.21 5.03 37.16 0.19 -0.02 16 16 O -0.62 0.58 8.56 -35.23 -0.30 0.28 16 17 Si 1.29 -2.40 8.45 -169.99 -1.44 -3.83 16 18 C -0.51 0.71 8.50 101.05 0.86 1.57 16 19 C -0.51 0.78 8.50 101.05 0.86 1.64 16 20 C -0.37 0.31 0.53 -90.62 -0.05 0.26 16 21 C -0.13 0.05 7.85 37.16 0.29 0.34 16 22 C -0.14 0.14 7.85 37.16 0.29 0.43 16 23 C -0.13 0.06 7.84 37.16 0.29 0.35 16 24 C 0.00 0.00 6.89 -7.61 -0.05 -0.05 16 25 S 0.09 0.12 20.68 -107.50 -2.22 -2.10 16 26 H 0.08 0.04 8.14 -51.93 -0.42 -0.39 16 27 H 0.06 -0.04 8.14 -51.93 -0.42 -0.47 16 28 H 0.09 -0.01 6.63 -51.92 -0.34 -0.35 16 29 H 0.08 -0.08 7.96 -51.93 -0.41 -0.50 16 30 H 0.38 -1.88 8.74 45.56 0.40 -1.48 16 31 H 0.11 0.03 8.14 -51.93 -0.42 -0.39 16 32 H 0.08 -0.04 7.62 -51.93 -0.40 -0.44 16 33 H 0.13 -0.19 8.14 -51.93 -0.42 -0.62 16 34 H 0.06 -0.19 6.88 -51.93 -0.36 -0.55 16 35 H 0.07 -0.24 7.22 -51.93 -0.37 -0.62 16 36 H 0.07 -0.12 7.48 -51.93 -0.39 -0.51 16 37 H 0.07 -0.11 7.79 -51.93 -0.40 -0.52 16 38 H 0.07 -0.07 7.79 -51.93 -0.40 -0.48 16 39 H 0.07 -0.09 7.79 -51.93 -0.40 -0.50 16 40 H 0.07 -0.12 7.79 -51.93 -0.40 -0.52 16 41 H 0.07 -0.13 7.48 -51.93 -0.39 -0.52 16 42 H 0.05 -0.05 7.80 -51.93 -0.40 -0.45 16 43 H 0.05 0.00 8.14 -51.92 -0.42 -0.42 16 44 H 0.06 -0.01 7.96 -51.93 -0.41 -0.42 16 45 H 0.06 -0.09 7.79 -51.93 -0.40 -0.50 16 46 H 0.06 -0.03 8.14 -51.93 -0.42 -0.45 16 47 H 0.06 -0.09 7.80 -51.93 -0.40 -0.49 16 48 H 0.06 -0.02 7.97 -51.93 -0.41 -0.43 16 49 H 0.05 0.00 8.14 -51.93 -0.42 -0.42 16 50 H 0.05 -0.06 7.79 -51.93 -0.40 -0.46 16 51 H 0.08 -0.19 6.06 -49.49 -0.30 -0.49 16 52 H 0.11 -0.25 8.14 -51.93 -0.42 -0.67 16 LS Contribution 416.57 15.07 6.28 6.28 Total: 0.00 -6.57 416.57 -11.45 -18.02 By element: Atomic # 1 Polarization: -6.37 SS G_CDS: -8.81 Total: -15.18 kcal Atomic # 6 Polarization: 2.36 SS G_CDS: 1.34 Total: 3.71 kcal Atomic # 7 Polarization: -3.02 SS G_CDS: -1.31 Total: -4.33 kcal Atomic # 8 Polarization: 0.81 SS G_CDS: -0.65 Total: 0.16 kcal Atomic # 14 Polarization: -0.47 SS G_CDS: -6.09 Total: -6.56 kcal Atomic # 16 Polarization: 0.12 SS G_CDS: -2.22 Total: -2.10 kcal Total LS contribution 6.28 Total: 6.28 kcal Total: -6.57 -11.45 -18.02 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_14186586_15704122.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -27.912 kcal (2) G-P(sol) polarization free energy of solvation -6.570 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -34.482 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.454 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.024 kcal (6) G-S(sol) free energy of system = (1) + (5) -45.936 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.91 seconds