Wall clock time and date at job start Mon Mar 8 2021 05:54:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86303 * 109.46970 * 2 1 4 4 C 1.50699 * 109.47450 * 120.00117 * 2 1 3 5 5 C 1.38599 * 120.71908 * 64.99603 * 4 2 1 6 6 N 1.32276 * 119.19648 * 179.97438 * 5 4 2 7 7 C 1.32493 * 120.74072 * 0.02562 * 6 5 4 8 8 N 1.38411 * 119.21535 * 179.97438 * 7 6 5 9 9 C 1.46508 * 119.99507 * 179.97438 * 8 7 6 10 10 H 1.08999 * 112.90775 * 23.75376 * 9 8 7 11 11 C 1.53782 * 113.60939 * 154.99940 * 9 8 7 12 12 C 1.53786 * 87.07870 * 89.11971 * 11 9 8 13 13 H 1.09001 * 113.60933 * 270.79969 * 12 11 9 14 14 C 1.50699 * 113.61389 * 139.98053 * 12 11 9 15 15 C 1.38224 * 119.99661 * 119.99992 * 14 12 11 16 16 C 1.38260 * 120.02069 * 179.97438 * 15 14 12 17 17 C 1.38197 * 120.00789 * 0.28248 * 16 15 14 18 18 C 1.38339 * 119.99178 * 359.41680 * 17 16 15 19 19 Br 1.89104 * 120.01246 * 180.31735 * 18 17 16 20 20 C 1.38243 * 119.99408 * 299.97707 * 14 12 11 21 21 C 1.53775 * 113.61674 * 252.49886 * 9 8 7 22 22 N 1.32493 * 121.56516 * 0.27325 * 7 6 5 23 23 C 1.32279 * 120.73964 * 359.43881 * 22 7 6 24 24 H 0.96703 * 114.00043 * 299.99667 * 1 2 3 25 25 H 1.09004 * 109.47070 * 240.00344 * 2 1 3 26 26 H 1.48500 * 110.00045 * 178.68099 * 3 2 1 27 27 H 1.48503 * 110.00136 * 300.00327 * 3 2 1 28 28 H 1.07995 * 120.40741 * 359.96362 * 5 4 2 29 29 H 0.96995 * 120.00056 * 0.02562 * 8 7 6 30 30 H 1.09001 * 113.61935 * 334.57291 * 11 9 8 31 31 H 1.09003 * 113.61720 * 203.66466 * 11 9 8 32 32 H 1.08000 * 119.98470 * 0.02562 * 15 14 12 33 33 H 1.08002 * 119.99108 * 179.97438 * 16 15 14 34 34 H 1.08004 * 120.00055 * 179.72824 * 17 16 15 35 35 H 1.08001 * 120.00704 * 0.02562 * 20 14 12 36 36 H 1.08998 * 113.61342 * 156.34176 * 21 9 8 37 37 H 1.08996 * 113.61604 * 25.43405 * 21 9 8 38 38 H 1.07993 * 120.40097 * 180.25438 * 23 22 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7104 1.2304 5 6 1.6926 -2.0633 1.4139 6 7 2.1479 -2.6567 2.5049 7 6 2.8244 -1.9725 3.4159 8 7 3.2858 -2.6251 4.5459 9 6 4.0361 -1.8852 5.5639 10 1 3.8258 -0.8158 5.5522 11 6 3.9568 -2.5134 6.9653 12 6 5.1941 -3.3408 6.5784 13 1 4.9523 -4.2898 6.0997 14 6 6.1958 -3.4869 7.6947 15 6 6.5283 -4.7434 8.1649 16 6 7.4477 -4.8780 9.1886 17 6 8.0304 -3.7558 9.7463 18 6 7.7027 -2.4983 9.2718 19 35 8.5063 -0.9628 10.0284 20 6 6.7825 -2.3641 8.2480 21 6 5.5373 -2.2177 5.5856 22 7 3.0645 -0.6773 3.2736 23 6 2.6420 -0.0249 2.2032 24 1 -0.3933 0.4417 0.7651 25 1 1.7923 -0.5138 -0.8900 26 1 3.5346 1.7704 0.0321 27 1 1.5614 2.4680 -1.2085 28 1 1.1414 -2.6262 0.6753 29 1 3.1130 -3.5722 4.6636 30 1 3.0617 -3.1148 7.1243 31 1 4.1407 -1.8045 7.7726 32 1 6.0703 -5.6204 7.7317 33 1 7.7068 -5.8601 9.5559 34 1 8.7453 -3.8609 10.5490 35 1 6.5227 -1.3822 7.8806 36 1 6.1532 -1.4279 6.0157 37 1 5.9181 -2.5803 4.6308 38 1 2.8444 1.0299 2.0909 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_14189270_12175864.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 05:54:52 Heat of formation + Delta-G solvation = 87.636299 kcal Electronic energy + Delta-G solvation = -22758.043043 eV Core-core repulsion = 19228.522372 eV Total energy + Delta-G solvation = -3529.520671 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 362.037 amu Computer time = 1.50 seconds Orbital eigenvalues (eV) -42.17585 -41.29900 -39.42890 -38.02894 -35.60274 -34.70556 -33.41849 -32.56141 -31.39910 -30.25779 -27.05524 -26.85017 -26.17198 -25.56773 -23.67729 -23.18730 -22.49150 -20.38358 -19.59312 -18.57398 -18.07222 -18.01690 -16.81365 -16.61963 -16.43172 -16.19130 -15.96264 -15.78531 -15.60573 -15.12729 -14.82908 -14.59161 -14.55628 -14.36301 -14.08411 -13.71046 -13.57868 -13.18928 -12.97892 -12.46270 -12.26176 -12.20707 -11.97178 -11.85737 -11.78144 -11.67198 -11.38271 -11.25737 -11.17238 -10.58750 -10.03042 -9.90772 -9.66405 -9.13866 -5.12320 0.03698 0.06102 0.14517 0.20126 0.64257 1.21137 1.55530 1.72622 1.91706 2.50303 2.79690 3.09521 3.33549 3.38988 3.50024 3.55879 3.61202 3.69157 3.72348 3.75411 3.83467 3.95562 4.08257 4.17048 4.19149 4.32396 4.47805 4.48562 4.58332 4.60665 4.67488 4.74482 4.84430 4.87692 4.92125 5.00371 5.15195 5.25685 5.31143 5.46251 5.73960 5.77693 5.99134 6.37302 6.50083 7.27186 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.540 6.540 2 C -0.046 4.046 3 Si 0.680 3.320 4 C -0.294 4.294 5 C 0.223 3.777 6 N -0.569 5.569 7 C 0.570 3.430 8 N -0.678 5.678 9 C 0.136 3.864 10 H 0.112 0.888 11 C -0.137 4.137 12 C -0.074 4.074 13 H 0.100 0.900 14 C -0.065 4.065 15 C -0.101 4.101 16 C -0.110 4.110 17 C -0.096 4.096 18 C -0.087 4.087 19 Br -0.049 7.049 20 C -0.089 4.089 21 C -0.146 4.146 22 N -0.560 5.560 23 C 0.200 3.800 24 H 0.379 0.621 25 H 0.116 0.884 26 H -0.255 1.255 27 H -0.251 1.251 28 H 0.170 0.830 29 H 0.415 0.585 30 H 0.079 0.921 31 H 0.101 0.899 32 H 0.128 0.872 33 H 0.132 0.868 34 H 0.132 0.868 35 H 0.134 0.866 36 H 0.096 0.904 37 H 0.074 0.926 38 H 0.167 0.833 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.153 0.131 1.419 1.833 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.346 6.346 2 C -0.158 4.158 3 Si 0.581 3.419 4 C -0.302 4.302 5 C 0.055 3.945 6 N -0.291 5.291 7 C 0.214 3.786 8 N -0.313 5.313 9 C 0.030 3.970 10 H 0.130 0.870 11 C -0.175 4.175 12 C -0.093 4.093 13 H 0.119 0.881 14 C -0.066 4.066 15 C -0.119 4.119 16 C -0.129 4.129 17 C -0.115 4.115 18 C -0.167 4.167 19 Br 0.036 6.964 20 C -0.108 4.108 21 C -0.185 4.185 22 N -0.282 5.282 23 C 0.033 3.967 24 H 0.226 0.774 25 H 0.133 0.867 26 H -0.180 1.180 27 H -0.175 1.175 28 H 0.187 0.813 29 H 0.253 0.747 30 H 0.097 0.903 31 H 0.119 0.881 32 H 0.146 0.854 33 H 0.150 0.850 34 H 0.150 0.850 35 H 0.152 0.848 36 H 0.115 0.885 37 H 0.093 0.907 38 H 0.183 0.817 Dipole moment (debyes) X Y Z Total from point charges 0.163 0.620 1.718 1.833 hybrid contribution -0.310 -1.036 -0.992 1.468 sum -0.147 -0.416 0.725 0.849 Atomic orbital electron populations 1.86514 1.17122 1.81645 1.49271 1.24701 0.85113 1.09630 0.96401 0.95014 0.81116 0.77750 0.87981 1.21717 1.08980 0.97855 1.01651 1.22837 0.89138 0.90973 0.91524 1.67978 1.16609 1.39999 1.04475 1.19339 0.86928 0.85508 0.86851 1.43810 1.57993 1.11825 1.17690 1.21836 0.91017 0.97617 0.86526 0.86989 1.23475 0.97858 0.99521 0.96642 1.21634 0.94276 0.99150 0.94215 0.88145 1.19693 0.97262 0.92689 0.96944 1.21235 0.97117 0.97129 0.96460 1.21209 0.96638 0.98640 0.96423 1.21169 0.99754 0.90831 0.99795 1.21824 1.01627 0.92678 1.00537 1.96786 1.80957 1.35543 1.83082 1.20967 0.95437 0.99462 0.94970 1.23625 0.96965 0.98251 0.99630 1.67902 1.26891 1.08265 1.25141 1.22774 0.88106 0.99216 0.86640 0.77356 0.86717 1.17966 1.17515 0.81265 0.74739 0.90259 0.88094 0.85369 0.84961 0.84963 0.84841 0.88519 0.90684 0.81651 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 28. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.50 12.85 -35.23 -0.45 0.05 16 2 C -0.05 0.07 2.83 36.01 0.10 0.17 16 3 Si 0.68 -1.42 29.88 -169.99 -5.08 -6.50 16 4 C -0.29 0.12 5.36 -104.35 -0.56 -0.44 16 5 C 0.22 0.17 10.99 -17.23 -0.19 -0.02 16 6 N -0.57 -1.35 10.46 -13.93 -0.15 -1.49 16 7 C 0.57 1.13 8.43 -322.80 -2.72 -1.58 16 8 N -0.68 0.12 5.41 -55.00 -0.30 -0.17 16 9 C 0.14 -0.19 4.33 -67.12 -0.29 -0.48 16 10 H 0.11 -0.06 7.37 -51.93 -0.38 -0.44 16 11 C -0.14 0.34 7.29 -25.92 -0.19 0.15 16 12 C -0.07 0.16 3.86 -90.96 -0.35 -0.19 16 13 H 0.10 -0.27 8.09 -51.93 -0.42 -0.69 16 14 C -0.06 0.05 5.29 -104.63 -0.55 -0.51 16 15 C -0.10 0.09 9.71 -39.58 -0.38 -0.30 16 16 C -0.11 0.07 10.05 -39.59 -0.40 -0.33 16 17 C -0.10 -0.02 9.79 -39.56 -0.39 -0.41 16 18 C -0.09 -0.07 6.22 -39.52 -0.25 -0.32 16 19 Br -0.05 -0.06 33.70 -68.01 -2.29 -2.35 16 20 C -0.09 0.00 8.35 -39.55 -0.33 -0.33 16 21 C -0.15 0.22 7.25 -25.92 -0.19 0.03 16 22 N -0.56 -0.96 9.13 -13.93 -0.13 -1.09 16 23 C 0.20 -0.03 9.92 -17.22 -0.17 -0.20 16 24 H 0.38 -1.72 8.70 45.56 0.40 -1.33 16 25 H 0.12 -0.14 7.96 -51.93 -0.41 -0.55 16 26 H -0.25 -0.08 7.11 56.52 0.40 0.32 16 27 H -0.25 -0.32 7.11 56.52 0.40 0.08 16 28 H 0.17 -0.16 8.06 -52.49 -0.42 -0.59 16 29 H 0.41 -0.51 8.82 -40.82 -0.36 -0.87 16 30 H 0.08 -0.20 8.14 -51.93 -0.42 -0.62 16 31 H 0.10 -0.26 7.72 -51.93 -0.40 -0.66 16 32 H 0.13 -0.33 8.05 -52.49 -0.42 -0.75 16 33 H 0.13 -0.33 8.06 -52.49 -0.42 -0.76 16 34 H 0.13 -0.11 8.06 -52.48 -0.42 -0.53 16 35 H 0.13 -0.15 6.66 -52.49 -0.35 -0.50 16 36 H 0.10 -0.17 6.31 -51.93 -0.33 -0.50 16 37 H 0.07 -0.02 8.14 -51.93 -0.42 -0.44 16 38 H 0.17 -0.46 5.07 -52.49 -0.27 -0.73 16 LS Contribution 340.52 15.07 5.13 5.13 Total: 0.00 -6.37 340.52 -14.38 -20.74 By element: Atomic # 1 Polarization: -5.30 SS G_CDS: -4.26 Total: -9.56 kcal Atomic # 6 Polarization: 2.10 SS G_CDS: -6.85 Total: -4.76 kcal Atomic # 7 Polarization: -2.18 SS G_CDS: -0.57 Total: -2.75 kcal Atomic # 8 Polarization: 0.50 SS G_CDS: -0.45 Total: 0.05 kcal Atomic # 14 Polarization: -1.42 SS G_CDS: -5.08 Total: -6.50 kcal Atomic # 35 Polarization: -0.06 SS G_CDS: -2.29 Total: -2.35 kcal Total LS contribution 5.13 Total: 5.13 kcal Total: -6.37 -14.38 -20.74 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_14189270_12175864.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 108.378 kcal (2) G-P(sol) polarization free energy of solvation -6.365 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 102.013 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -14.376 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.741 kcal (6) G-S(sol) free energy of system = (1) + (5) 87.636 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.50 seconds