Wall clock time and date at job start Mon Mar 8 2021 05:54:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86305 * 109.47300 * 2 1 4 4 C 1.50708 * 109.46830 * 240.00415 * 2 1 3 5 5 C 1.38020 * 120.33520 * 119.99912 * 4 2 1 6 6 N 1.31966 * 120.85728 * 179.97438 * 5 4 2 7 7 C 1.32398 * 121.62428 * 359.97438 * 6 5 4 8 8 N 1.39000 * 119.71075 * 179.97438 * 7 6 5 9 9 C 1.46501 * 120.00074 * 180.02562 * 8 7 6 10 10 H 1.08997 * 112.85129 * 23.80022 * 9 8 7 11 11 C 1.53783 * 113.61399 * 155.00409 * 9 8 7 12 12 C 1.53777 * 87.08336 * 89.19394 * 11 9 8 13 13 H 1.09002 * 113.61788 * 270.79878 * 12 11 9 14 14 C 1.50705 * 113.61267 * 139.98157 * 12 11 9 15 15 C 1.38219 * 119.99627 * 120.00288 * 14 12 11 16 16 C 1.38259 * 120.01712 * 180.27939 * 15 14 12 17 17 C 1.38199 * 120.01240 * 359.48295 * 16 15 14 18 18 C 1.38339 * 119.98710 * 0.51678 * 17 16 15 19 19 Br 1.89100 * 120.00962 * 179.76571 * 18 17 16 20 20 C 1.38244 * 119.99124 * 300.01874 * 14 12 11 21 21 C 1.53781 * 87.07998 * 25.43416 * 12 11 9 22 22 C 1.39140 * 120.58452 * 0.27396 * 7 6 5 23 23 C 1.38300 * 119.09804 * 359.47884 * 22 7 6 24 24 H 0.96703 * 113.99995 * 59.99475 * 1 2 3 25 25 H 1.08996 * 109.47757 * 120.00424 * 2 1 3 26 26 H 1.48500 * 109.99559 * 60.00517 * 3 2 1 27 27 H 1.48500 * 109.99881 * 181.32292 * 3 2 1 28 28 H 1.08000 * 119.57290 * 359.97438 * 5 4 2 29 29 H 0.97005 * 119.99715 * 0.02562 * 8 7 6 30 30 H 1.09002 * 113.61256 * 334.64477 * 11 9 8 31 31 H 1.08998 * 113.60824 * 203.74650 * 11 9 8 32 32 H 1.08002 * 119.98676 * 359.97438 * 15 14 12 33 33 H 1.08005 * 119.99359 * 179.72211 * 16 15 14 34 34 H 1.08002 * 120.00119 * 180.25954 * 17 16 15 35 35 H 1.07999 * 120.00623 * 0.02562 * 20 14 12 36 36 H 1.08996 * 113.61667 * 89.12025 * 21 12 11 37 37 H 1.09003 * 113.61130 * 220.01766 * 21 12 11 38 38 H 1.08005 * 120.45473 * 179.70302 * 22 7 6 39 39 H 1.07993 * 120.74945 * 180.26915 * 23 22 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7565 0.0000 4 6 1.9313 -0.7104 -1.2306 5 6 2.7251 -0.0462 -2.1436 6 7 3.1710 -0.6584 -3.2244 7 6 2.8782 -1.9249 -3.4755 8 7 3.3689 -2.5302 -4.6266 9 6 3.0484 -3.9312 -4.9110 10 1 2.1340 -4.2643 -4.4200 11 6 3.1092 -4.2857 -6.4062 12 6 4.5948 -4.6167 -6.1868 13 1 5.2576 -3.7624 -6.3253 14 6 5.0566 -5.8424 -6.9321 15 6 6.0710 -5.7422 -7.8656 16 6 6.4911 -6.8654 -8.5537 17 6 5.9042 -8.0908 -8.3008 18 6 4.8889 -8.1915 -7.3666 19 35 4.0810 -9.8667 -7.0247 20 6 4.4654 -7.0668 -6.6821 21 6 4.2360 -4.8885 -4.7164 22 6 2.0785 -2.6536 -2.6006 23 6 1.6009 -2.0402 -1.4567 24 1 -0.3933 0.4418 -0.7650 25 1 1.7924 -0.5139 0.8899 26 1 1.5616 2.4678 1.2086 27 1 3.5346 1.7702 -0.0322 28 1 2.9848 0.9878 -1.9714 29 1 3.9235 -2.0250 -5.2415 30 1 2.9444 -3.4325 -7.0642 31 1 2.5039 -5.1516 -6.6745 32 1 6.5322 -4.7854 -8.0610 33 1 7.2807 -6.7859 -9.2864 34 1 6.2354 -8.9688 -8.8354 35 1 3.6723 -7.1448 -5.9532 36 1 3.9390 -5.9192 -4.5227 37 1 4.9811 -4.5220 -4.0102 38 1 1.8371 -3.6853 -2.8099 39 1 0.9817 -2.5820 -0.7572 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_14189270_13915762.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 05:54:56 Heat of formation + Delta-G solvation = 71.178325 kcal Electronic energy + Delta-G solvation = -22602.934892 eV Core-core repulsion = 19138.126461 eV Total energy + Delta-G solvation = -3464.808431 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 361.042 amu Computer time = 1.50 seconds Orbital eigenvalues (eV) -41.77852 -41.04916 -39.43132 -37.85493 -35.45512 -33.50559 -33.31489 -32.20473 -30.89720 -30.28226 -26.93069 -26.90806 -25.84354 -24.77327 -23.66168 -22.86023 -22.28519 -20.26026 -19.04025 -18.43994 -18.04419 -17.43797 -16.75701 -16.57469 -16.36221 -16.11776 -15.93780 -15.62285 -15.40008 -14.94692 -14.74771 -14.57757 -14.43598 -14.19346 -14.03810 -13.69431 -13.61020 -13.34809 -13.01273 -12.53202 -12.33893 -12.21750 -12.01080 -11.97856 -11.67858 -11.42428 -11.26100 -11.12790 -10.73343 -10.39030 -10.38313 -9.93749 -9.69205 -8.73587 -5.03397 0.02532 0.16908 0.23520 0.41870 0.61399 1.31160 1.62949 1.95587 1.98575 2.47383 2.83516 3.24603 3.42687 3.47487 3.50283 3.58025 3.68631 3.77164 3.77492 3.90552 3.95566 4.03025 4.06813 4.16505 4.26343 4.33209 4.36480 4.51192 4.53505 4.55563 4.63186 4.72480 4.80455 4.82849 4.85962 4.97485 5.02552 5.12505 5.25637 5.31802 5.42852 5.51843 5.71340 5.97819 6.48742 6.59150 7.13904 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.542 6.542 2 C -0.052 4.052 3 Si 0.682 3.318 4 C -0.235 4.235 5 C 0.155 3.845 6 N -0.539 5.539 7 C 0.410 3.590 8 N -0.705 5.705 9 C 0.129 3.871 10 H 0.101 0.899 11 C -0.136 4.136 12 C -0.072 4.072 13 H 0.101 0.899 14 C -0.066 4.066 15 C -0.101 4.101 16 C -0.110 4.110 17 C -0.095 4.095 18 C -0.087 4.087 19 Br -0.049 7.049 20 C -0.089 4.089 21 C -0.151 4.151 22 C -0.238 4.238 23 C -0.006 4.006 24 H 0.379 0.621 25 H 0.112 0.888 26 H -0.253 1.253 27 H -0.256 1.256 28 H 0.155 0.845 29 H 0.406 0.594 30 H 0.080 0.920 31 H 0.100 0.900 32 H 0.129 0.871 33 H 0.133 0.867 34 H 0.133 0.867 35 H 0.133 0.867 36 H 0.096 0.904 37 H 0.078 0.922 38 H 0.135 0.865 39 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.214 0.701 -2.855 2.948 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.348 6.348 2 C -0.164 4.164 3 Si 0.584 3.416 4 C -0.240 4.240 5 C -0.002 4.002 6 N -0.256 5.256 7 C 0.174 3.826 8 N -0.336 5.336 9 C 0.022 3.978 10 H 0.119 0.881 11 C -0.174 4.174 12 C -0.090 4.090 13 H 0.120 0.880 14 C -0.067 4.067 15 C -0.119 4.119 16 C -0.129 4.129 17 C -0.115 4.115 18 C -0.167 4.167 19 Br 0.036 6.964 20 C -0.109 4.109 21 C -0.189 4.189 22 C -0.262 4.262 23 C -0.031 4.031 24 H 0.226 0.774 25 H 0.129 0.871 26 H -0.178 1.178 27 H -0.181 1.181 28 H 0.172 0.828 29 H 0.243 0.757 30 H 0.099 0.901 31 H 0.118 0.882 32 H 0.147 0.853 33 H 0.151 0.849 34 H 0.151 0.849 35 H 0.151 0.849 36 H 0.114 0.886 37 H 0.096 0.904 38 H 0.152 0.848 39 H 0.154 0.846 Dipole moment (debyes) X Y Z Total from point charges 0.511 0.615 -2.357 2.489 hybrid contribution 0.144 -0.629 0.327 0.723 sum 0.655 -0.014 -2.030 2.133 Atomic orbital electron populations 1.86490 1.17328 1.81666 1.49282 1.24783 0.85022 1.09666 0.96957 0.94857 0.81072 0.78146 0.87500 1.21004 1.05882 0.96653 1.00462 1.22207 0.91534 0.98559 0.87893 1.67124 1.27239 1.09090 1.22153 1.18351 0.89079 0.88427 0.86698 1.44140 1.55999 1.10872 1.22611 1.21858 0.98358 0.80681 0.96861 0.88141 1.23449 0.95548 1.02704 0.95682 1.21584 0.96783 0.95487 0.95175 0.88040 1.19693 0.96023 0.94057 0.96884 1.21239 0.96214 0.99052 0.95388 1.21217 0.99920 0.92035 0.99700 1.21175 0.94903 0.98792 0.96646 1.21824 1.00616 0.92185 1.02050 1.96788 1.80865 1.23397 1.95309 1.20949 0.99962 0.90845 0.99124 1.23688 0.98859 1.00439 0.95962 1.21508 1.05260 1.02030 0.97423 1.21197 0.93856 0.93176 0.94911 0.77423 0.87073 1.17815 1.18107 0.82843 0.75722 0.90121 0.88189 0.85336 0.84930 0.84940 0.84923 0.88585 0.90363 0.84753 0.84612 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 28. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.06 12.78 -35.23 -0.45 -0.51 16 2 C -0.05 0.01 2.84 36.01 0.10 0.12 16 3 Si 0.68 -0.70 29.82 -169.99 -5.07 -5.77 16 4 C -0.23 -0.10 5.40 -104.46 -0.56 -0.66 16 5 C 0.16 0.15 9.84 -17.57 -0.17 -0.02 16 6 N -0.54 -1.28 10.39 -12.44 -0.13 -1.41 16 7 C 0.41 0.49 7.65 -155.02 -1.19 -0.70 16 8 N -0.70 0.66 5.44 -53.14 -0.29 0.37 16 9 C 0.13 -0.33 4.11 -67.12 -0.28 -0.61 16 10 H 0.10 -0.31 6.09 -51.93 -0.32 -0.62 16 11 C -0.14 0.42 7.29 -25.92 -0.19 0.23 16 12 C -0.07 0.18 3.86 -90.96 -0.35 -0.17 16 13 H 0.10 -0.29 8.09 -51.93 -0.42 -0.71 16 14 C -0.07 0.07 5.29 -104.62 -0.55 -0.48 16 15 C -0.10 0.11 9.71 -39.58 -0.38 -0.28 16 16 C -0.11 0.10 10.05 -39.59 -0.40 -0.30 16 17 C -0.10 0.00 9.79 -39.56 -0.39 -0.39 16 18 C -0.09 -0.05 6.22 -39.52 -0.25 -0.30 16 19 Br -0.05 -0.04 33.70 -68.01 -2.29 -2.34 16 20 C -0.09 0.04 8.35 -39.55 -0.33 -0.29 16 21 C -0.15 0.37 7.25 -25.92 -0.19 0.18 16 22 C -0.24 -0.07 9.29 -39.22 -0.36 -0.44 16 23 C -0.01 0.00 9.77 -39.32 -0.38 -0.39 16 24 H 0.38 -1.36 8.70 45.56 0.40 -0.96 16 25 H 0.11 0.01 7.96 -51.93 -0.41 -0.40 16 26 H -0.25 -0.55 7.11 56.52 0.40 -0.15 16 27 H -0.26 -0.34 7.11 56.52 0.40 0.07 16 28 H 0.15 -0.15 4.88 -52.49 -0.26 -0.41 16 29 H 0.41 -0.54 8.83 -40.82 -0.36 -0.90 16 30 H 0.08 -0.23 8.14 -51.93 -0.42 -0.66 16 31 H 0.10 -0.32 7.72 -51.93 -0.40 -0.72 16 32 H 0.13 -0.35 8.05 -52.49 -0.42 -0.77 16 33 H 0.13 -0.36 8.06 -52.48 -0.42 -0.78 16 34 H 0.13 -0.13 8.06 -52.49 -0.42 -0.56 16 35 H 0.13 -0.22 6.66 -52.49 -0.35 -0.57 16 36 H 0.10 -0.28 6.31 -51.93 -0.33 -0.60 16 37 H 0.08 -0.10 8.14 -51.93 -0.42 -0.52 16 38 H 0.13 -0.20 6.03 -52.48 -0.32 -0.52 16 39 H 0.14 -0.08 8.06 -52.49 -0.42 -0.50 16 LS Contribution 342.83 15.07 5.17 5.17 Total: 0.00 -5.85 342.83 -13.43 -19.28 By element: Atomic # 1 Polarization: -5.80 SS G_CDS: -4.50 Total: -10.30 kcal Atomic # 6 Polarization: 1.38 SS G_CDS: -5.87 Total: -4.49 kcal Atomic # 7 Polarization: -0.63 SS G_CDS: -0.42 Total: -1.04 kcal Atomic # 8 Polarization: -0.06 SS G_CDS: -0.45 Total: -0.51 kcal Atomic # 14 Polarization: -0.70 SS G_CDS: -5.07 Total: -5.77 kcal Atomic # 35 Polarization: -0.04 SS G_CDS: -2.29 Total: -2.34 kcal Total LS contribution 5.17 Total: 5.17 kcal Total: -5.85 -13.43 -19.28 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_14189270_13915762.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 90.457 kcal (2) G-P(sol) polarization free energy of solvation -5.845 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 84.612 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.434 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.279 kcal (6) G-S(sol) free energy of system = (1) + (5) 71.178 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.50 seconds